RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 DHX40Q8IX18 779 aaKnown RBP18.78■□□□□ 0.6
C9orf3-206ENST00000428313 CLTCQ00610 1675 aaKnown RBP18.78■□□□□ 0.6
C9orf3-206ENST00000428313 TMEM132EQ6IEE7 984 aa18.77■□□□□ 0.6
C9orf3-206ENST00000428313 NBPF11Q86T75 865 aa18.77■□□□□ 0.6
C9orf3-206ENST00000428313 MSL3Q8N5Y2 521 aaKnown RBP18.77■□□□□ 0.6
C9orf3-206ENST00000428313 BANK1Q8NDB2 785 aa18.77■□□□□ 0.6
C9orf3-206ENST00000428313 CEP89Q96ST8 783 aa18.77■□□□□ 0.6
C9orf3-206ENST00000428313 DONSONQ9NYP3 566 aa18.77■□□□□ 0.6
C9orf3-206ENST00000428313 KIF1CO43896 1103 aaKnown RBP18.77■□□□□ 0.6
C9orf3-206ENST00000428313 CCDC34Q96HJ3 373 aa18.77■□□□□ 0.6
C9orf3-206ENST00000428313 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.6
C9orf3-206ENST00000428313 GORABQ5T7V8 394 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 MMS22LQ6ZRQ5 1243 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 HOMER1Q86YM7 354 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 PGBD1Q96JS3 809 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 ZSCAN16Q9H4T2 348 aaPredicted RBP18.76■□□□□ 0.59
C9orf3-206ENST00000428313 CRYBG1Q9Y4K1 1723 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 SMC2O95347 1197 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 SFPQP23246 707 aaKnown RBP eCLIP18.76■□□□□ 0.59
C9orf3-206ENST00000428313 GPATCH11Q8N954 259 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 KCNB2Q92953 911 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 PRAM1Q96QH2 718 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 CARD6Q9BX69 1037 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 ANO10Q9NW15 660 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 BCCIPQ9P287 314 aaKnown RBP eCLIP18.76■□□□□ 0.59
C9orf3-206ENST00000428313 CYP46A1Q9Y6A2 500 aa18.76■□□□□ 0.59
C9orf3-206ENST00000428313 MAP2K7O14733 419 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 ME3Q16798 604 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 FERMT3Q86UX7 667 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 MLH3Q9UHC1 1453 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 HMOX1P09601 288 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 ARMCX5Q6P1M9 558 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 TRIM65Q6PJ69 517 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 CXorf56Q9H5V9 222 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 PARP3Q9Y6F1 533 aa18.75■□□□□ 0.59
C9orf3-206ENST00000428313 H3BQF6 201 aa18.74■□□□□ 0.59
C9orf3-206ENST00000428313 PSME1Q06323 249 aa18.74■□□□□ 0.59
C9orf3-206ENST00000428313 FAM173BQ6P4H8 233 aa18.74■□□□□ 0.59
C9orf3-206ENST00000428313 RABGGTAQ92696 567 aa18.74■□□□□ 0.59
C9orf3-206ENST00000428313 NEXMIFQ5QGS0 1516 aa18.74■□□□□ 0.59
C9orf3-206ENST00000428313 PRR29P0C7W0 189 aa18.74■□□□□ 0.59
C9orf3-206ENST00000428313 RSRC2Q7L4I2 434 aaKnown RBP18.74■□□□□ 0.59
C9orf3-206ENST00000428313 EFCAB13Q8IY85 973 aa18.74■□□□□ 0.59
C9orf3-206ENST00000428313 CEP57L1Q8IYX8 460 aa18.74■□□□□ 0.59
C9orf3-206ENST00000428313 NAT10Q9H0A0 1025 aaKnown RBP18.74■□□□□ 0.59
C9orf3-206ENST00000428313 ATP8B2P98198 1209 aa18.73■□□□□ 0.59
C9orf3-206ENST00000428313 STAG3Q9UJ98 1225 aa18.73■□□□□ 0.59
C9orf3-206ENST00000428313 MAP2P11137 1827 aaKnown RBP18.73■□□□□ 0.59
C9orf3-206ENST00000428313 CCDC151A5D8V7 595 aa18.72■□□□□ 0.59
C9orf3-206ENST00000428313 URI1O94763 535 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-206ENST00000428313 BRD3Q15059 726 aa18.72■□□□□ 0.59
C9orf3-206ENST00000428313 JAKMIP1Q96N16 626 aaKnown RBP18.72■□□□□ 0.59
C9orf3-206ENST00000428313 TFIP11Q9UBB9 837 aaKnown RBP18.72■□□□□ 0.59
C9orf3-206ENST00000428313 ADCY9O60503 1353 aa18.72■□□□□ 0.59
C9orf3-206ENST00000428313 CPA1P15085 419 aa18.72■□□□□ 0.59
C9orf3-206ENST00000428313 SART3Q15020 963 aaKnown RBP18.72■□□□□ 0.59
C9orf3-206ENST00000428313 RPAINQ86UA6 219 aa18.72■□□□□ 0.59
C9orf3-206ENST00000428313 MPHOSPH8Q99549 860 aa18.72■□□□□ 0.59
C9orf3-206ENST00000428313 ZRSR1Q15695 479 aaKnown RBP18.71■□□□□ 0.59
C9orf3-206ENST00000428313 LONRF2Q1L5Z9 754 aa18.71■□□□□ 0.59
C9orf3-206ENST00000428313 ARHGEF10O15013 1369 aa18.71■□□□□ 0.59
C9orf3-206ENST00000428313 FCHSD1Q86WN1 690 aa18.71■□□□□ 0.59
C9orf3-206ENST00000428313 CNTROBQ8N137 903 aa18.71■□□□□ 0.59
C9orf3-206ENST00000428313 PARD6BQ9BYG5 372 aa18.71■□□□□ 0.59
C9orf3-206ENST00000428313 MED4Q9NPJ6 270 aa18.71■□□□□ 0.59
C9orf3-206ENST00000428313 IL13P35225 146 aa18.7■□□□□ 0.58
C9orf3-206ENST00000428313 HNRNPLLQ8WVV9 542 aaKnown RBP18.7■□□□□ 0.58
C9orf3-206ENST00000428313 SYTL4Q96C24 671 aaPredicted RBP18.7■□□□□ 0.58
C9orf3-206ENST00000428313 CARD10Q9BWT7 1032 aa18.7■□□□□ 0.58
C9orf3-206ENST00000428313 APOBRQ0VD83 1088 aa18.7■□□□□ 0.58
C9orf3-206ENST00000428313 HDGFL2Q7Z4V5 671 aaPredicted RBP18.7■□□□□ 0.58
C9orf3-206ENST00000428313 AOPEPQ8N6M6 819 aa18.7■□□□□ 0.58
C9orf3-206ENST00000428313 NECAB1Q8N987 351 aa18.7■□□□□ 0.58
C9orf3-206ENST00000428313 CHL1O00533 1208 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
C9orf3-206ENST00000428313 TMC6Q7Z403 805 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 PI4K2BQ8TCG2 481 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 VPS18Q9P253 973 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 TPCN1Q9ULQ1 816 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 ITSN1Q15811 1721 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 MAP3K9P80192 1104 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 CEP120Q8N960 986 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 BPIFA3Q9BQP9 254 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 FAM107BQ9H098 131 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 CFAP45Q9UL16 551 aa18.69■□□□□ 0.58
C9orf3-206ENST00000428313 MYH15Q9Y2K3 1946 aa18.68■□□□□ 0.58
C9orf3-206ENST00000428313 A0A087WUV0 522 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-206ENST00000428313 CCDC196A0A1B0GTZ2 297 aa18.68■□□□□ 0.58
C9orf3-206ENST00000428313 EIF3JO75822 258 aaKnown RBP18.68■□□□□ 0.58
C9orf3-206ENST00000428313 ATP6V1AP38606 617 aa18.68■□□□□ 0.58
C9orf3-206ENST00000428313 GOLGA1Q92805 767 aa18.68■□□□□ 0.58
C9orf3-206ENST00000428313 N4BP2Q86UW6 1770 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-206ENST00000428313 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 FANCGO15287 622 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 TXLNAP40222 546 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 PPP2R3AQ06190 1150 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 ADCK5Q3MIX3 580 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 TADA2BQ86TJ2 420 aa18.67■□□□□ 0.58
C9orf3-206ENST00000428313 RUFY2Q8WXA3 655 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms