RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
PEX1-203ENST00000428214 ECHDC1Q9NTX5 307 aa13.66□□□□□ -0.22
PEX1-203ENST00000428214 TRIM28Q13263 835 aaKnown RBP13.65□□□□□ -0.22
PEX1-203ENST00000428214 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
PEX1-203ENST00000428214 HELBQ8NG08 1087 aaPredicted RBP13.65□□□□□ -0.22
PEX1-203ENST00000428214 ITGA6P23229 1130 aa13.65□□□□□ -0.22
PEX1-203ENST00000428214 FAM227BQ96M60 508 aa13.65□□□□□ -0.22
PEX1-203ENST00000428214 NEUROD6Q96NK8 337 aa13.65□□□□□ -0.22
PEX1-203ENST00000428214 ESYT1Q9BSJ8 1104 aa13.65□□□□□ -0.22
PEX1-203ENST00000428214 HSP90AB4PQ58FF6 505 aa13.65□□□□□ -0.23
PEX1-203ENST00000428214 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.23
PEX1-203ENST00000428214 PI16Q6UXB8 463 aa13.65□□□□□ -0.23
PEX1-203ENST00000428214 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.23
PEX1-203ENST00000428214 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
PEX1-203ENST00000428214 MYH3P11055 1940 aa13.64□□□□□ -0.23
PEX1-203ENST00000428214 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
PEX1-203ENST00000428214 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
PEX1-203ENST00000428214 CTSWP56202 376 aa13.63□□□□□ -0.23
PEX1-203ENST00000428214 ANO2Q9NQ90 1003 aa13.63□□□□□ -0.23
PEX1-203ENST00000428214 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
PEX1-203ENST00000428214 DTNBO60941 627 aa13.63□□□□□ -0.23
PEX1-203ENST00000428214 CSF1RP07333 972 aa13.63□□□□□ -0.23
PEX1-203ENST00000428214 CCDC57Q2TAC2 916 aa13.63□□□□□ -0.23
PEX1-203ENST00000428214 SMARCC1Q92922 1105 aaPredicted RBP13.63□□□□□ -0.23
PEX1-203ENST00000428214 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
PEX1-203ENST00000428214 ERVV-1B6SEH8 477 aa13.63□□□□□ -0.23
PEX1-203ENST00000428214 ERC1Q8IUD2 1116 aa13.63□□□□□ -0.23
PEX1-203ENST00000428214 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
PEX1-203ENST00000428214 EYA2O00167 538 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 NTSR2O95665 410 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 DDX46Q7L014 1031 aaKnown RBP13.62□□□□□ -0.23
PEX1-203ENST00000428214 SCARF1Q14162 830 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 RIC1Q4ADV7 1423 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 ERC2O15083 957 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 ERFEQ4G0M1 354 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 PROM2Q8N271 834 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 DDRGK1Q96HY6 314 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 SEC62Q99442 399 aaKnown RBP13.62□□□□□ -0.23
PEX1-203ENST00000428214 ANTXR1Q9H6X2 564 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 SNRKQ9NRH2 765 aa13.62□□□□□ -0.23
PEX1-203ENST00000428214 LY75O60449 1722 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
PEX1-203ENST00000428214 BCORQ6W2J9 1755 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 GLRX3O76003 335 aaKnown RBP13.61□□□□□ -0.23
PEX1-203ENST00000428214 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
PEX1-203ENST00000428214 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 CASZ1Q86V15 1759 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
PEX1-203ENST00000428214 A0A0D9SFI3 127 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 TAF5LO75529 589 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 PTH1RQ03431 593 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 IFIT5Q13325 482 aaKnown RBP13.61□□□□□ -0.23
PEX1-203ENST00000428214 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 ABCC12Q96J65 1359 aa13.61□□□□□ -0.23
PEX1-203ENST00000428214 TTC41PQ6P2S7 1318 aa13.6□□□□□ -0.23
PEX1-203ENST00000428214 LDHAL6AQ6ZMR3 332 aa13.6□□□□□ -0.23
PEX1-203ENST00000428214 CCDC129Q6ZRS4 1044 aa13.6□□□□□ -0.23
PEX1-203ENST00000428214 AOX1Q06278 1338 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 TAF7LQ5H9L4 462 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 ZNF589Q86UQ0 364 aaPredicted RBP13.59□□□□□ -0.23
PEX1-203ENST00000428214 SH3TC1Q8TE82 1336 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 ZNF609O15014 1411 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 CPA1P15085 419 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
PEX1-203ENST00000428214 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
PEX1-203ENST00000428214 PLA2G12BQ9BX93 195 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 RIPOR2Q9Y4F9 1068 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 CDHR2Q9BYE9 1310 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 NMIQ13287 307 aaPredicted RBP13.59□□□□□ -0.23
PEX1-203ENST00000428214 NOL8Q76FK4 1167 aaKnown RBP13.59□□□□□ -0.23
PEX1-203ENST00000428214 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
PEX1-203ENST00000428214 MYO5AQ9Y4I1 1855 aaKnown RBP13.58□□□□□ -0.23
PEX1-203ENST00000428214 CNTNAP4Q9C0A0 1308 aa13.58□□□□□ -0.24
PEX1-203ENST00000428214 SGSM2O43147 1006 aa13.58□□□□□ -0.24
PEX1-203ENST00000428214 PDE8AO60658 829 aa13.58□□□□□ -0.24
PEX1-203ENST00000428214 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
PEX1-203ENST00000428214 UPF3BQ9BZI7 483 aaKnown RBP13.58□□□□□ -0.24
PEX1-203ENST00000428214 IL15P40933 162 aaPredicted RBP13.58□□□□□ -0.24
PEX1-203ENST00000428214 BCL11BQ9C0K0 894 aaPredicted RBP13.58□□□□□ -0.24
PEX1-203ENST00000428214 GOLIM4O00461 696 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 FSD1Q9BTV5 496 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 DAXXQ9UER7 740 aaPredicted RBP13.57□□□□□ -0.24
PEX1-203ENST00000428214 RPS6KA4O75676 772 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 ANP32EQ9BTT0 268 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 METTL24Q5JXM2 366 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 VGLL2Q8N8G2 317 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 XAGE2Q96GT9 111 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 LSG1Q9H089 658 aaKnown RBP13.57□□□□□ -0.24
PEX1-203ENST00000428214 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
PEX1-203ENST00000428214 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
PEX1-203ENST00000428214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms