RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 CLEC17AQ6ZS10 378 aa20.8■□□□□ 0.92
PRDM5-203ENST00000428209 MARCH10Q8NA82 808 aaPredicted RBP20.8■□□□□ 0.92
PRDM5-203ENST00000428209 CCDC85AQ96PX6 553 aaPredicted RBP20.8■□□□□ 0.92
PRDM5-203ENST00000428209 PLA2G12BQ9BX93 195 aa20.8■□□□□ 0.92
PRDM5-203ENST00000428209 PUS3Q9BZE2 481 aaKnown RBP20.8■□□□□ 0.92
PRDM5-203ENST00000428209 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.8■□□□□ 0.92
PRDM5-203ENST00000428209 IL6STP40189 918 aaPredicted RBP20.79■□□□□ 0.92
PRDM5-203ENST00000428209 NECTIN1Q15223 517 aa20.79■□□□□ 0.92
PRDM5-203ENST00000428209 NLRP10Q86W26 655 aa20.79■□□□□ 0.92
PRDM5-203ENST00000428209 MAP4K1Q92918 833 aa20.79■□□□□ 0.92
PRDM5-203ENST00000428209 RBM8AQ9Y5S9 174 aaKnown RBP20.79■□□□□ 0.92
PRDM5-203ENST00000428209 CASTP20810 708 aaKnown RBP20.79■□□□□ 0.92
PRDM5-203ENST00000428209 INTS4Q96HW7 963 aaKnown RBP20.79■□□□□ 0.92
PRDM5-203ENST00000428209 GOLGA6L22H0YM25 854 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 BAG4O95429 457 aaKnown RBP20.78■□□□□ 0.92
PRDM5-203ENST00000428209 ZKSCAN1P17029 563 aaPredicted RBP20.78■□□□□ 0.92
PRDM5-203ENST00000428209 PTMSP20962 102 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 DZIP3Q86Y13 1208 aaKnown RBP20.78■□□□□ 0.92
PRDM5-203ENST00000428209 GZF1Q9H116 711 aaPredicted RBP20.78■□□□□ 0.92
PRDM5-203ENST00000428209 TBC1D2BQ9UPU7 963 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 CSF1RP07333 972 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 TAF7LQ5H9L4 462 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 SYNE4Q8N205 404 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 KCNB2Q92953 911 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 TTC14Q96N46 770 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 CEP126Q9P2H0 1117 aa20.78■□□□□ 0.92
PRDM5-203ENST00000428209 IFIT5Q13325 482 aaKnown RBP20.77■□□□□ 0.92
PRDM5-203ENST00000428209 BARGINQ6ZT62 677 aa20.77■□□□□ 0.92
PRDM5-203ENST00000428209 A0A1B0GUL7 405 aa20.77■□□□□ 0.92
PRDM5-203ENST00000428209 CREB3L3Q68CJ9 461 aa20.77■□□□□ 0.92
PRDM5-203ENST00000428209 DDX46Q7L014 1031 aaKnown RBP20.77■□□□□ 0.92
PRDM5-203ENST00000428209 JAKMIP1Q96N16 626 aaKnown RBP20.77■□□□□ 0.92
PRDM5-203ENST00000428209 MED23Q9ULK4 1368 aa20.77■□□□□ 0.92
PRDM5-203ENST00000428209 CDHR2Q9BYE9 1310 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 ERVV-1B6SEH8 477 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 ATP6V1AP38606 617 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 AK2P54819 239 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 ADCK5Q3MIX3 580 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 ZNF589Q86UQ0 364 aaPredicted RBP20.76■□□□□ 0.91
PRDM5-203ENST00000428209 FBXO3Q9UK99 471 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 CPA1P15085 419 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 TM6SF1Q9BZW5 370 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 SLIT2O94813 1529 aa20.76■□□□□ 0.91
PRDM5-203ENST00000428209 TRMT112Q9UI30 125 aaKnown RBP20.75■□□□□ 0.91
PRDM5-203ENST00000428209 ZNF609O15014 1411 aa20.75■□□□□ 0.91
PRDM5-203ENST00000428209 RFX7Q2KHR2 1363 aa20.75■□□□□ 0.91
PRDM5-203ENST00000428209 SKOR2Q2VWA4 1001 aaPredicted RBP20.75■□□□□ 0.91
PRDM5-203ENST00000428209 ZDHHC9Q9Y397 364 aa20.75■□□□□ 0.91
PRDM5-203ENST00000428209 CYP46A1Q9Y6A2 500 aa20.75■□□□□ 0.91
PRDM5-203ENST00000428209 NWD2Q9ULI1 1742 aa20.74■□□□□ 0.91
PRDM5-203ENST00000428209 LOC102724428A0A0B4J2F2 783 aa20.74■□□□□ 0.91
PRDM5-203ENST00000428209 SIK1P57059 783 aa20.74■□□□□ 0.91
PRDM5-203ENST00000428209 RNF20Q5VTR2 975 aa20.74■□□□□ 0.91
PRDM5-203ENST00000428209 KBTBD3Q8NAB2 608 aa20.74■□□□□ 0.91
PRDM5-203ENST00000428209 ZSWIM6Q9HCJ5 1215 aa20.74■□□□□ 0.91
PRDM5-203ENST00000428209 LIMCH1Q9UPQ0 1083 aa20.74■□□□□ 0.91
PRDM5-203ENST00000428209 GOLIM4O00461 696 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
PRDM5-203ENST00000428209 SLC27A2O14975 620 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 TTLL11Q8NHH1 800 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 CCDC87Q9NVE4 849 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 PAG1Q9NWQ8 432 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 AKAP2Q9Y2D5 859 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 NUP98P52948 1817 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 TAF5LO75529 589 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 EIF5P55010 431 aaKnown RBP20.73■□□□□ 0.91
PRDM5-203ENST00000428209 VPS53Q5VIR6 699 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 INTS5Q6P9B9 1019 aaKnown RBP20.73■□□□□ 0.91
PRDM5-203ENST00000428209 RUFY3Q7L099 469 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 LARP6Q9BRS8 491 aaKnown RBP20.73■□□□□ 0.91
PRDM5-203ENST00000428209 PDRG1Q9NUG6 133 aa20.73■□□□□ 0.91
PRDM5-203ENST00000428209 IFIT1P09914 478 aaKnown RBP20.72■□□□□ 0.91
PRDM5-203ENST00000428209 CRKLP46109 303 aaKnown RBP20.72■□□□□ 0.91
PRDM5-203ENST00000428209 MCTP1Q6DN14 999 aa20.72■□□□□ 0.91
PRDM5-203ENST00000428209 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
PRDM5-203ENST00000428209 CHGBP05060 677 aa20.72■□□□□ 0.91
PRDM5-203ENST00000428209 ITGA6P23229 1130 aa20.72■□□□□ 0.91
PRDM5-203ENST00000428209 CTSWP56202 376 aa20.72■□□□□ 0.91
PRDM5-203ENST00000428209 GREM2Q9H772 168 aa20.72■□□□□ 0.91
PRDM5-203ENST00000428209 MCMDC2Q4G0Z9 681 aa20.71■□□□□ 0.91
PRDM5-203ENST00000428209 PSMA5P28066 241 aa20.71■□□□□ 0.91
PRDM5-203ENST00000428209 FAM98CQ17RN3 349 aaKnown RBP20.71■□□□□ 0.91
PRDM5-203ENST00000428209 GORABQ5T7V8 394 aa20.71■□□□□ 0.91
PRDM5-203ENST00000428209 ZNF34Q8IZ26 560 aa20.71■□□□□ 0.91
PRDM5-203ENST00000428209 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
PRDM5-203ENST00000428209 ANKRD18BA2A2Z9 1011 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 CCDC158Q5M9N0 1113 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 FOXD4L5Q5VV16 416 aaPredicted RBP20.7■□□□□ 0.9
PRDM5-203ENST00000428209 LDHAL6AQ6ZMR3 332 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 FOXD4L4Q8WXT5 416 aaPredicted RBP20.7■□□□□ 0.9
PRDM5-203ENST00000428209 NGLY1Q96IV0 654 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 C8orf37Q96NL8 207 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 UBN2Q6ZU65 1347 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 JCADQ9P266 1359 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 PDE8AO60658 829 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 ITPK1Q13572 414 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 CCDC129Q6ZRS4 1044 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 PALLDQ8WX93 1383 aa20.7■□□□□ 0.9
PRDM5-203ENST00000428209 XAGE2Q96GT9 111 aa20.69■□□□□ 0.9
PRDM5-203ENST00000428209 HMG20BQ9P0W2 317 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms