RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ZC3H12CQ9C0D7 883 aaKnown RBP11.27□□□□□ -0.6
SNX13-203ENST00000428135 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.6
SNX13-203ENST00000428135 ANKRD36BQ8N2N9 1353 aa11.27□□□□□ -0.6
SNX13-203ENST00000428135 EPB41L2O43491 1005 aaKnown RBP11.27□□□□□ -0.61
SNX13-203ENST00000428135 RXRBP28702 533 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 SP4Q02446 784 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 PRKG1Q13976 671 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 CACNA2D4Q7Z3S7 1137 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 SAP30BPQ9UHR5 308 aaKnown RBP11.27□□□□□ -0.61
SNX13-203ENST00000428135 CBFA2T2O43439 604 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 RXRAP19793 462 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 FSIP1Q8NA03 581 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX13-203ENST00000428135 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 BRF1Q92994 677 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 CCDC97Q96F63 343 aaPredicted RBP11.27□□□□□ -0.61
SNX13-203ENST00000428135 FAM89AQ96GI7 184 aa11.27□□□□□ -0.61
SNX13-203ENST00000428135 LUC7LQ9NQ29 371 aaKnown RBP11.27□□□□□ -0.61
SNX13-203ENST00000428135 HMGB2P26583 209 aaKnown RBP11.26□□□□□ -0.61
SNX13-203ENST00000428135 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 NCOA7Q8NI08 942 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 PUF60Q9UHX1 559 aaKnown RBP11.26□□□□□ -0.61
SNX13-203ENST00000428135 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
SNX13-203ENST00000428135 IFIT1BQ5T764 474 aaKnown RBP11.26□□□□□ -0.61
SNX13-203ENST00000428135 MAGEB6Q8N7X4 407 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
SNX13-203ENST00000428135 HDAC9Q9UKV0 1011 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 NEO1Q92859 1461 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 TPTE2Q6XPS3 522 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
SNX13-203ENST00000428135 WTAPQ15007 396 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 GPR162Q16538 588 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 TSG101Q99816 390 aa11.26□□□□□ -0.61
SNX13-203ENST00000428135 SYCP3Q8IZU3 236 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 IP6K1Q92551 441 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 ZKSCAN3Q9BRR0 538 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 CARD14Q9BXL6 1004 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 KSR2Q6VAB6 950 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 ZBTB21Q9ULJ3 1066 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 BAG4O95429 457 aaKnown RBP11.25□□□□□ -0.61
SNX13-203ENST00000428135 SDSP20132 328 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 TFCP2Q12800 502 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 ZNF526Q8TF50 670 aaPredicted RBP11.25□□□□□ -0.61
SNX13-203ENST00000428135 SMTNL1A8MU46 457 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 KIF5BP33176 963 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 TTC22Q5TAA0 569 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 IL27Q8NEV9 243 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 BICD1Q96G01 975 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 PSMD1Q99460 953 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 RBM27Q9P2N5 1060 aaKnown RBP11.25□□□□□ -0.61
SNX13-203ENST00000428135 KDM6BO15054 1643 aa11.25□□□□□ -0.61
SNX13-203ENST00000428135 ERLIN2O94905 339 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 TDRD12Q587J7 1177 aaKnown RBP11.24□□□□□ -0.61
SNX13-203ENST00000428135 KLHDC4Q8TBB5 520 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 CTNNBL1Q8WYA6 563 aaPredicted RBP11.24□□□□□ -0.61
SNX13-203ENST00000428135 UQCRFS1P1P0C7P4 283 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 ZNF804AQ7Z570 1209 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 JDP2Q8WYK2 163 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 EIF6P56537 245 aaKnown RBP11.24□□□□□ -0.61
SNX13-203ENST00000428135 ARHGAP29Q52LW3 1261 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 MCM9Q9NXL9 1143 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 AFMP43652 599 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 GSTO1P78417 241 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 BICC1Q9H694 974 aaKnown RBP11.24□□□□□ -0.61
SNX13-203ENST00000428135 LGR6Q9HBX8 967 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 PCDHB15Q9Y5E8 787 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 NPHP4O75161 1426 aaPredicted RBP11.24□□□□□ -0.61
SNX13-203ENST00000428135 MAGEB6P1A0A0J9YX57 407 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 CCP110O43303 1012 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
SNX13-203ENST00000428135 EHMT1Q9H9B1 1298 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 PCDH11XQ9BZA7 1347 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
SNX13-203ENST00000428135 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 PKD2L1Q9P0L9 805 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 PRAG1Q86YV5 1406 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 ZYXQ15942 572 aaKnown RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 AKNAD1Q5T1N1 836 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 TBC1D2Q9BYX2 928 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 DTNBO60941 627 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 A1BGP04217 495 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 CALM1P0DP23 149 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 CALM2P0DP24 149 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 CALM3P0DP25 149 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 CALML4Q96GE6 196 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 TRMT1Q9NXH9 659 aaKnown RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 NSD2O96028 1365 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 FLT4P35916 1363 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 RNMTO43148 476 aaKnown RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 FKBP15Q5T1M5 1219 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 NUP88Q99567 741 aaPredicted RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 TCP11L1Q9NUJ3 509 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 ZCCHC11Q5TAX3 1644 aaKnown RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 MTIF2P46199 727 aaKnown RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 TAF4BQ92750 862 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms