RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 RTF1Q92541 710 aaKnown RBP6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 SCAND2PQ9GZW5 306 aaPredicted RBP6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 NUP62CLQ9H1M0 184 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 KCNF1Q9H3M0 494 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 SLC52A1Q9NWF4 448 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 CFDP1Q9UEE9 299 aaPredicted RBP6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 FAM198AQ9UFP1 575 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 KDM2AQ9Y2K7 1162 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 UNC13BO14795 1591 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 NEURL4Q96JN8 1562 aa6.55□□□□□ -1.36
VTI1BP4-201ENST00000427516 MYO5CQ9NQX4 1742 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ANKRD18BA2A2Z9 1011 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 CCDC151A5D8V7 595 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 SOWAHBA6NEL2 793 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 EIF3CLB5ME19 914 aaKnown RBP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 SRGAP3O43295 1099 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZSCAN12O43309 604 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 HMMRO75330 724 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZRANB2O95218 330 aaKnown RBP eCLIP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 RLBP1P12271 317 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 OAS2P29728 719 aaKnown RBP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 LMAN1P49257 510 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 BCAMP50895 628 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZNF75DP51815 510 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 MNAT1P51948 309 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ICA1Q05084 483 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ARHGAP29Q52LW3 1261 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 MICALCLQ6ZW33 695 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 USP48Q86UV5 1035 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 PLA2G4DQ86XP0 818 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 CEP112Q8N8E3 955 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 CTCFLQ8NI51 663 aaPredicted RBP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 IL17RAQ96F46 866 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 TMX3Q96JJ7 454 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 EIF3CQ99613 913 aaKnown RBP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 API5Q9BZZ5 524 aaKnown RBP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ATG3Q9NT62 314 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZNF777Q9ULD5 760 aaPredicted RBP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 RTL1A6NKG5 1358 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 PIK3R4Q99570 1358 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 SBNO2Q9Y2G9 1366 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 ABCA9Q8IUA7 1624 aa6.54□□□□□ -1.36
VTI1BP4-201ENST00000427516 A2MP01023 1474 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 NOS1P29475 1434 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 ADGRL3Q9HAR2 1447 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 TRAPPC8Q9Y2L5 1435 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 MYOM1P52179 1685 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 PPRC1Q5VV67 1664 aaKnown RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 KLHL33A6NCF5 533 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 MPHOSPH10O00566 681 aaKnown RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 MYO1BO43795 1136 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 PPFIA4O75335 1185 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 ERLIN2O94905 339 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 IPO7O95373 1038 aaKnown RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 CD2BP2O95400 341 aaKnown RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 ZSCAN22P10073 491 aaPredicted RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 SKILP12757 684 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 TRIM27P14373 513 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 PRSS12P56730 875 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 KRT85P78386 507 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 SLMAPQ14BN4 828 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 PDCD2Q16342 344 aaPredicted RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 FAM98CQ17RN3 349 aaKnown RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 IFFO2Q5TF58 517 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 CCDC30Q5VVM6 783 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 AP1ARQ63HQ0 302 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 HDXQ7Z353 690 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 TCP11L2Q8N4U5 519 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 SPC24Q8NBT2 197 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 NEK11Q8NG66 645 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 FAM71BQ8TC56 605 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 HNRNPLLQ8WVV9 542 aaKnown RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 RABGGTAQ92696 567 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 GTF3C6Q969F1 213 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 ITFG2Q969R8 447 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 MPHOSPH8Q99549 860 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 FUCA2Q9BTY2 467 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 NUCKS1Q9H1E3 243 aaKnown RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 TNMDQ9H2S6 317 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 SPATS2LQ9NUQ6 558 aaKnown RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 RAPGEF6Q8TEU7 1601 aa6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 RPAP1Q9BWH6 1393 aaPredicted RBP6.53□□□□□ -1.36
VTI1BP4-201ENST00000427516 NPHP3Q7Z494 1330 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 PTCH1Q13635 1447 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 PPIP5K1Q6PFW1 1433 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 IQGAP3Q86VI3 1631 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 SHTN1A0MZ66 631 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 C3orf80F5H4A9 247 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 NEK4P51957 841 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 CRYMQ14894 314 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 RBBP5Q15291 538 aaKnown RBP6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 MAP9Q49MG5 647 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 PACS2Q86VP3 889 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 LRRC8AQ8IWT6 810 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 TEX11Q8IYF3 940 aa6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 CCAR2Q8N163 923 aaKnown RBP6.52□□□□□ -1.37
VTI1BP4-201ENST00000427516 MICALL1Q8N3F8 863 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms