RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 TRIOBPQ9H2D6 2365 aa12.49□□□□□ -0.41
LSG1-202ENST00000427461 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
LSG1-202ENST00000427461 TNIP1Q15025 636 aa12.48□□□□□ -0.41
LSG1-202ENST00000427461 MORC1Q86VD1 984 aa12.48□□□□□ -0.41
LSG1-202ENST00000427461 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
LSG1-202ENST00000427461 DCPSQ96C86 337 aaKnown RBP12.48□□□□□ -0.41
LSG1-202ENST00000427461 RBM17Q96I25 401 aaKnown RBP12.48□□□□□ -0.41
LSG1-202ENST00000427461 CRAMP1Q96RY5 1269 aa12.48□□□□□ -0.41
LSG1-202ENST00000427461 VPS33BQ9H267 617 aa12.48□□□□□ -0.41
LSG1-202ENST00000427461 ASTN2O75129 1339 aaPredicted RBP12.47□□□□□ -0.41
LSG1-202ENST00000427461 MOB2Q70IA6 237 aa12.47□□□□□ -0.41
LSG1-202ENST00000427461 RTFDC1Q9BY42 306 aaPredicted RBP12.47□□□□□ -0.41
LSG1-202ENST00000427461 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
LSG1-202ENST00000427461 RBBP6Q7Z6E9 1792 aaKnown RBP12.47□□□□□ -0.41
LSG1-202ENST00000427461 KIAA2012Q0VF49 1180 aa12.46□□□□□ -0.41
LSG1-202ENST00000427461 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
LSG1-202ENST00000427461 CDCA5Q96FF9 252 aa12.46□□□□□ -0.41
LSG1-202ENST00000427461 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
LSG1-202ENST00000427461 NYXQ9GZU5 481 aa12.46□□□□□ -0.41
LSG1-202ENST00000427461 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
LSG1-202ENST00000427461 NUP98P52948 1817 aa12.46□□□□□ -0.42
LSG1-202ENST00000427461 KIAA0100Q14667 2235 aaKnown RBP12.45□□□□□ -0.42
LSG1-202ENST00000427461 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
LSG1-202ENST00000427461 FKTNO75072 461 aa12.45□□□□□ -0.42
LSG1-202ENST00000427461 GPTP24298 496 aa12.45□□□□□ -0.42
LSG1-202ENST00000427461 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
LSG1-202ENST00000427461 DPP8Q6V1X1 898 aaPredicted RBP12.45□□□□□ -0.42
LSG1-202ENST00000427461 UBN2Q6ZU65 1347 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 H0YGN5 161 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 PSMD14O00487 310 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 SUSD4Q5VX71 490 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 INTS3Q68E01 1043 aaKnown RBP12.44□□□□□ -0.42
LSG1-202ENST00000427461 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 DPF2Q92785 391 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
LSG1-202ENST00000427461 PANK3Q9H999 370 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 TRIM17Q9Y577 477 aa12.44□□□□□ -0.42
LSG1-202ENST00000427461 RGL2O15211 777 aa12.43□□□□□ -0.42
LSG1-202ENST00000427461 TM4SF4P48230 202 aa12.43□□□□□ -0.42
LSG1-202ENST00000427461 NOM1Q5C9Z4 860 aaKnown RBP12.43□□□□□ -0.42
LSG1-202ENST00000427461 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
LSG1-202ENST00000427461 MPNDQ8N594 471 aa12.43□□□□□ -0.42
LSG1-202ENST00000427461 SCAF8Q9UPN6 1271 aaKnown RBP12.43□□□□□ -0.42
LSG1-202ENST00000427461 ABCC4O15439 1325 aa12.42□□□□□ -0.42
LSG1-202ENST00000427461 UBE2Q2LH0YL09 131 aa12.42□□□□□ -0.42
LSG1-202ENST00000427461 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
LSG1-202ENST00000427461 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
LSG1-202ENST00000427461 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
LSG1-202ENST00000427461 KCNQ5Q9NR82 932 aa12.42□□□□□ -0.42
LSG1-202ENST00000427461 RANBP2P49792 3224 aaKnown RBP12.41□□□□□ -0.42
LSG1-202ENST00000427461 CUL9Q8IWT3 2517 aa12.41□□□□□ -0.42
LSG1-202ENST00000427461 TAF1P21675 1872 aa12.41□□□□□ -0.42
LSG1-202ENST00000427461 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
LSG1-202ENST00000427461 DBNDD1Q9H9R9 158 aa12.41□□□□□ -0.42
LSG1-202ENST00000427461 DUOX1Q9NRD9 1551 aa12.41□□□□□ -0.42
LSG1-202ENST00000427461 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
LSG1-202ENST00000427461 NTSR2O95665 410 aa12.4□□□□□ -0.42
LSG1-202ENST00000427461 TTLL7Q6ZT98 887 aa12.4□□□□□ -0.42
LSG1-202ENST00000427461 SP8Q8IXZ3 490 aa12.4□□□□□ -0.42
LSG1-202ENST00000427461 CEP290O15078 2479 aa12.4□□□□□ -0.42
LSG1-202ENST00000427461 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
LSG1-202ENST00000427461 ANGEL2Q5VTE6 544 aaKnown RBP12.39□□□□□ -0.43
LSG1-202ENST00000427461 PRAMEF18Q5VWM3 479 aa12.39□□□□□ -0.43
LSG1-202ENST00000427461 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
LSG1-202ENST00000427461 MAP3K15Q6ZN16 1313 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 LAMB2P55268 1798 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 ERVV-1B6SEH8 477 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 FKBP1BP68106 108 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 CFHR5Q9BXR6 569 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 ZBTB3Q9H5J0 574 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 PTPN22Q9Y2R2 807 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
LSG1-202ENST00000427461 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
LSG1-202ENST00000427461 DIAPH1O60610 1272 aaKnown RBP12.37□□□□□ -0.43
LSG1-202ENST00000427461 BBOX1O75936 387 aa12.37□□□□□ -0.43
LSG1-202ENST00000427461 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
LSG1-202ENST00000427461 SCARF1Q14162 830 aa12.37□□□□□ -0.43
LSG1-202ENST00000427461 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
LSG1-202ENST00000427461 ARMC5Q96C12 935 aa12.37□□□□□ -0.43
LSG1-202ENST00000427461 RPS12P25398 132 aaKnown RBP12.36□□□□□ -0.43
LSG1-202ENST00000427461 CAP1Q01518 475 aa12.36□□□□□ -0.43
LSG1-202ENST00000427461 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
LSG1-202ENST00000427461 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
LSG1-202ENST00000427461 SCN9AQ15858 1988 aa12.36□□□□□ -0.43
LSG1-202ENST00000427461 ECE2O60344 883 aa12.35□□□□□ -0.43
LSG1-202ENST00000427461 SREBF2Q12772 1141 aa12.35□□□□□ -0.43
LSG1-202ENST00000427461 TTLL12Q14166 644 aaPredicted RBP12.35□□□□□ -0.43
LSG1-202ENST00000427461 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
LSG1-202ENST00000427461 TMEM106CQ9BVX2 250 aa12.35□□□□□ -0.43
LSG1-202ENST00000427461 RRP7AQ9Y3A4 280 aaKnown RBP12.35□□□□□ -0.43
LSG1-202ENST00000427461 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
LSG1-202ENST00000427461 MYCP01106 439 aaPredicted RBP12.34□□□□□ -0.43
LSG1-202ENST00000427461 SLC10A5Q5PT55 438 aa12.34□□□□□ -0.43
LSG1-202ENST00000427461 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
LSG1-202ENST00000427461 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
LSG1-202ENST00000427461 UNC80Q8N2C7 3258 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms