RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, human

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VNN3-208	ENST00000427187	BRPF1	P55201	1214 aa	Predicted RBP	11.47	□□□□□ -0.57
VNN3-208	ENST00000427187	MPND	Q8N594	471 aa		11.47	□□□□□ -0.57
VNN3-208	ENST00000427187	PNISR	Q8TF01	805 aa	Known RBP	11.47	□□□□□ -0.57
VNN3-208	ENST00000427187	UTP14A	Q9BVJ6	771 aa	Known RBP	11.47	□□□□□ -0.57
VNN3-208	ENST00000427187	PDE4DIP	Q5VU43	2346 aa		11.47	□□□□□ -0.57
VNN3-208	ENST00000427187	DUOX1	Q9NRD9	1551 aa		11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	YDJC	A8MPS7	323 aa		11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	TNRC18	O15417	2968 aa	Predicted RBP	11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	PDIA6	Q15084	440 aa		11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	PARP10	Q53GL7	1025 aa		11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	LRP10	Q7Z4F1	713 aa		11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	USP48	Q86UV5	1035 aa		11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	SUPT20H	Q8NEM7	779 aa		11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	NECTIN2	Q92692	538 aa		11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.46	□□□□□ -0.57
VNN3-208	ENST00000427187	ANKRD36C	Q5JPF3	1778 aa		11.46	□□□□□ -0.58
VNN3-208	ENST00000427187	POLR2A	P24928	1970 aa	Known RBP	11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	NEFM	P07197	916 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	HUNK	P57058	714 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	KIAA2012	Q0VF49	1180 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	AIMP1	Q12904	312 aa	Known RBP	11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	NFE2L2	Q16236	605 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	CDC37L1	Q7L3B6	337 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	SAMD7	Q7Z3H4	446 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	MICALL2	Q8IY33	904 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	PLEKHF1	Q96S99	279 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	PGAP2	Q9UHJ9	254 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	CNOT7	Q9UIV1	285 aa	Known RBP	11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	TSPYL4	Q9UJ04	414 aa		11.45	□□□□□ -0.58
VNN3-208	ENST00000427187	COL4A1	P02462	1669 aa		11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	CA12	O43570	354 aa		11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	EGFR	P00533	1210 aa		11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	TNIP1	Q15025	636 aa		11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	SLC10A5	Q5PT55	438 aa		11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	SP8	Q8IXZ3	490 aa		11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	HHIPL1	Q96JK4	782 aa		11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	VPS33B	Q9H267	617 aa		11.44	□□□□□ -0.58
VNN3-208	ENST00000427187	ERBB4	Q15303	1308 aa		11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	ADM5	C9JUS6	153 aa		11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	BBOX1	O75936	387 aa		11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	SOX10	P56693	466 aa		11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	GRAP	Q13588	217 aa		11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	RBM26	Q5T8P6	1007 aa	Known RBP	11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	DDX46	Q7L014	1031 aa	Known RBP	11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	NLRP10	Q86W26	655 aa		11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	GRAPL	Q8TC17	118 aa	Predicted RBP	11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	ZC3H15	Q8WU90	426 aa	Known RBP	11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	DBNDD1	Q9H9R9	158 aa		11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	TRMT112	Q9UI30	125 aa	Known RBP	11.43	□□□□□ -0.58
VNN3-208	ENST00000427187	CDHR2	Q9BYE9	1310 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	MAPK8IP3	Q9UPT6	1336 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187		H7C1D1	291 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	PSMD14	O00487	310 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	RIMBP2	O15034	1052 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	NOG	Q13253	232 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	COPS6	Q7L5N1	327 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	XAGE3	Q8WTP9	111 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	KCNQ5	Q9NR82	932 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	LRRC37A	A6NMS7	1700 aa		11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	DDX60	Q8IY21	1712 aa	Known RBP	11.42	□□□□□ -0.58
VNN3-208	ENST00000427187	FAM155A	B1AL88	458 aa	Predicted RBP	11.41	□□□□□ -0.58
VNN3-208	ENST00000427187	KRT24	Q2M2I5	525 aa		11.41	□□□□□ -0.58
VNN3-208	ENST00000427187	KRT26	Q7Z3Y9	468 aa		11.41	□□□□□ -0.58
VNN3-208	ENST00000427187	ASTN2	O75129	1339 aa	Predicted RBP	11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	SH3TC1	Q8TE82	1336 aa		11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	KIF23	Q02241	960 aa	Predicted RBP	11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	DOK7	Q18PE1	504 aa		11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	WASHC4	Q2M389	1173 aa		11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	RTL5	Q5HYW3	569 aa	Predicted RBP	11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	RGMB	Q6NW40	437 aa		11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	CELF1	Q92879	486 aa	Known RBP	11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	GBA2	Q9HCG7	927 aa	Predicted RBP	11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.4	□□□□□ -0.58
VNN3-208	ENST00000427187	TRPA1	O75762	1119 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	ZNF157	P51786	506 aa	Predicted RBP	11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	RIPK4	P57078	832 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	GPSM2	P81274	684 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	TCIRG1	Q13488	830 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	HSP90AB3P	Q58FF7	597 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	RNF186	Q9NXI6	227 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	POLL	Q9UGP5	575 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	SCN9A	Q15858	1988 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	RTL9	Q8NET4	1388 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	AKAP11	Q9UKA4	1901 aa		11.39	□□□□□ -0.59
VNN3-208	ENST00000427187	ATP5J2-PTCD1	G3V325	749 aa		11.38	□□□□□ -0.59
VNN3-208	ENST00000427187	C6orf229	H3BNL8	230 aa		11.38	□□□□□ -0.59
VNN3-208	ENST00000427187	ECE2	O60344	883 aa		11.38	□□□□□ -0.59
VNN3-208	ENST00000427187	C2orf69	Q8N8R5	385 aa		11.38	□□□□□ -0.59
VNN3-208	ENST00000427187	DCPS	Q96C86	337 aa	Known RBP	11.38	□□□□□ -0.59
VNN3-208	ENST00000427187	FAM89A	Q96GI7	184 aa		11.38	□□□□□ -0.59
VNN3-208	ENST00000427187	GGA3	Q9NZ52	723 aa		11.38	□□□□□ -0.59
VNN3-208	ENST00000427187	CHPF2	Q9P2E5	772 aa		11.38	□□□□□ -0.59
VNN3-208	ENST00000427187	KIF4B	Q2VIQ3	1234 aa		11.37	□□□□□ -0.59
VNN3-208	ENST00000427187	DPF2	Q92785	391 aa		11.37	□□□□□ -0.59
VNN3-208	ENST00000427187	SCAF8	Q9UPN6	1271 aa	Known RBP	11.37	□□□□□ -0.59
VNN3-208	ENST00000427187	SLC10A3	P09131	477 aa		11.36	□□□□□ -0.59
VNN3-208	ENST00000427187	NEUROD2	Q15784	382 aa		11.36	□□□□□ -0.59
VNN3-208	ENST00000427187	CCDC102A	Q96A19	550 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms