RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 NBPF5PQ86XG9 351 aaPredicted RBP18.57■□□□□ 0.56
GINS3-203ENST00000426538 TNS1Q9HBL0 1735 aaKnown RBP18.57■□□□□ 0.56
GINS3-203ENST00000426538 NPHP1O15259 732 aa18.57■□□□□ 0.56
GINS3-203ENST00000426538 IFIT2P09913 472 aaKnown RBP18.57■□□□□ 0.56
GINS3-203ENST00000426538 ITGA6P23229 1130 aa18.57■□□□□ 0.56
GINS3-203ENST00000426538 ZNF594Q96JF6 807 aaPredicted RBP18.57■□□□□ 0.56
GINS3-203ENST00000426538 GREM2Q9H772 168 aa18.57■□□□□ 0.56
GINS3-203ENST00000426538 FBXO3Q9UK99 471 aa18.57■□□□□ 0.56
GINS3-203ENST00000426538 EYA2O00167 538 aa18.56■□□□□ 0.56
GINS3-203ENST00000426538 IL15P40933 162 aaPredicted RBP18.56■□□□□ 0.56
GINS3-203ENST00000426538 EN1Q05925 392 aaPredicted RBP18.56■□□□□ 0.56
GINS3-203ENST00000426538 CCDC152Q4G0S7 254 aa18.56■□□□□ 0.56
GINS3-203ENST00000426538 TTC22Q5TAA0 569 aa18.56■□□□□ 0.56
GINS3-203ENST00000426538 FLAD1Q8NFF5 587 aa18.56■□□□□ 0.56
GINS3-203ENST00000426538 AKT1S1Q96B36 256 aa18.56■□□□□ 0.56
GINS3-203ENST00000426538 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
GINS3-203ENST00000426538 CIAO1O76071 339 aa18.55■□□□□ 0.56
GINS3-203ENST00000426538 ERFEQ4G0M1 354 aa18.55■□□□□ 0.56
GINS3-203ENST00000426538 AACSQ86V21 672 aa18.55■□□□□ 0.56
GINS3-203ENST00000426538 STAP2Q9UGK3 403 aa18.55■□□□□ 0.56
GINS3-203ENST00000426538 MYH3P11055 1940 aa18.55■□□□□ 0.56
GINS3-203ENST00000426538 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
GINS3-203ENST00000426538 MSH5O43196 834 aa18.54■□□□□ 0.56
GINS3-203ENST00000426538 GYS1P13807 737 aa18.54■□□□□ 0.56
GINS3-203ENST00000426538 TFCP2Q12800 502 aa18.54■□□□□ 0.56
GINS3-203ENST00000426538 EZH2Q15910 746 aaKnown RBP18.54■□□□□ 0.56
GINS3-203ENST00000426538 ZNF827Q17R98 1081 aa18.54■□□□□ 0.56
GINS3-203ENST00000426538 GPATCH3Q96I76 525 aa18.54■□□□□ 0.56
GINS3-203ENST00000426538 BAG6P46379 1132 aa18.54■□□□□ 0.56
GINS3-203ENST00000426538 CAMKK2Q96RR4 588 aa18.54■□□□□ 0.56
GINS3-203ENST00000426538 RBM19Q9Y4C8 960 aaKnown RBP18.54■□□□□ 0.56
GINS3-203ENST00000426538 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
GINS3-203ENST00000426538 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
GINS3-203ENST00000426538 CARMIL3Q8ND23 1372 aa18.53■□□□□ 0.56
GINS3-203ENST00000426538 NFIXQ14938 502 aa18.53■□□□□ 0.56
GINS3-203ENST00000426538 LRRC24Q50LG9 513 aa18.53■□□□□ 0.56
GINS3-203ENST00000426538 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
GINS3-203ENST00000426538 LDHAL6AQ6ZMR3 332 aa18.53■□□□□ 0.56
GINS3-203ENST00000426538 ATG9AQ7Z3C6 839 aa18.53■□□□□ 0.56
GINS3-203ENST00000426538 AOX1Q06278 1338 aa18.53■□□□□ 0.56
GINS3-203ENST00000426538 GSPT1P15170 499 aaKnown RBP18.52■□□□□ 0.56
GINS3-203ENST00000426538 EAF2Q96CJ1 260 aaPredicted RBP18.52■□□□□ 0.56
GINS3-203ENST00000426538 CNNM1Q9NRU3 951 aa18.52■□□□□ 0.56
GINS3-203ENST00000426538 TTC41PQ6P2S7 1318 aa18.52■□□□□ 0.56
GINS3-203ENST00000426538 ERC2O15083 957 aa18.52■□□□□ 0.55
GINS3-203ENST00000426538 TSHZ3Q63HK5 1081 aa18.52■□□□□ 0.55
GINS3-203ENST00000426538 NLRP3Q96P20 1036 aa18.52■□□□□ 0.55
GINS3-203ENST00000426538 PUS3Q9BZE2 481 aaKnown RBP18.52■□□□□ 0.55
GINS3-203ENST00000426538 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.55
GINS3-203ENST00000426538 CEP126Q9P2H0 1117 aa18.52■□□□□ 0.55
GINS3-203ENST00000426538 TNNI3KQ59H18 835 aa18.51■□□□□ 0.55
GINS3-203ENST00000426538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.51■□□□□ 0.55
GINS3-203ENST00000426538 FPGT-TNNI3KV9GXZ4 949 aa18.51■□□□□ 0.55
GINS3-203ENST00000426538 COL23A1Q86Y22 540 aaPredicted RBP18.5■□□□□ 0.55
GINS3-203ENST00000426538 MPHOSPH8Q99549 860 aa18.5■□□□□ 0.55
GINS3-203ENST00000426538 GPR108Q9NPR9 543 aa18.5■□□□□ 0.55
GINS3-203ENST00000426538 ECHDC1Q9NTX5 307 aa18.5■□□□□ 0.55
GINS3-203ENST00000426538 DDX60Q8IY21 1712 aaKnown RBP18.5■□□□□ 0.55
GINS3-203ENST00000426538 SDSP20132 328 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 TM4SF1P30408 202 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 SF3B3Q15393 1217 aaKnown RBP18.49■□□□□ 0.55
GINS3-203ENST00000426538 NLGN1Q8N2Q7 840 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 CNBD1Q8NA66 436 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 RTL9Q8NET4 1388 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 TRIM6-TRIM34B2RNG4 842 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 GLRX3O76003 335 aaKnown RBP18.49■□□□□ 0.55
GINS3-203ENST00000426538 IGHMBP2P38935 993 aaKnown RBP18.49■□□□□ 0.55
GINS3-203ENST00000426538 SEC31BQ9NQW1 1179 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 STK32BQ9NY57 414 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 AKAP2Q9Y2D5 859 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 RIPOR2Q9Y4F9 1068 aa18.49■□□□□ 0.55
GINS3-203ENST00000426538 COL24A1Q17RW2 1714 aa18.48■□□□□ 0.55
GINS3-203ENST00000426538 SERPINB2P05120 415 aa18.48■□□□□ 0.55
GINS3-203ENST00000426538 SLC15A2Q16348 729 aa18.48■□□□□ 0.55
GINS3-203ENST00000426538 METTL24Q5JXM2 366 aa18.48■□□□□ 0.55
GINS3-203ENST00000426538 CCDC125Q86Z20 511 aa18.48■□□□□ 0.55
GINS3-203ENST00000426538 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
GINS3-203ENST00000426538 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
GINS3-203ENST00000426538 LAMB2P55268 1798 aa18.48■□□□□ 0.55
GINS3-203ENST00000426538 CDC45O75419 566 aa18.47■□□□□ 0.55
GINS3-203ENST00000426538 CASC1Q6TDU7 716 aa18.47■□□□□ 0.55
GINS3-203ENST00000426538 PI4K2BQ8TCG2 481 aa18.47■□□□□ 0.55
GINS3-203ENST00000426538 RILPL2Q969X0 211 aa18.47■□□□□ 0.55
GINS3-203ENST00000426538 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
GINS3-203ENST00000426538 ABCC12Q96J65 1359 aa18.46■□□□□ 0.55
GINS3-203ENST00000426538 ST5P78524 1137 aa18.46■□□□□ 0.55
GINS3-203ENST00000426538 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
GINS3-203ENST00000426538 CCDC24Q8N4L8 307 aa18.46■□□□□ 0.55
GINS3-203ENST00000426538 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
GINS3-203ENST00000426538 TIMM10P62072 90 aa18.46■□□□□ 0.55
GINS3-203ENST00000426538 TLR7Q9NYK1 1049 aaKnown RBP18.46■□□□□ 0.55
GINS3-203ENST00000426538 MROH5Q6ZUA9 1318 aa18.45■□□□□ 0.54
GINS3-203ENST00000426538 EIF5BO60841 1220 aaKnown RBP18.45■□□□□ 0.54
GINS3-203ENST00000426538 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
GINS3-203ENST00000426538 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
GINS3-203ENST00000426538 ANKRD18AQ8IVF6 992 aa18.45■□□□□ 0.54
GINS3-203ENST00000426538 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
GINS3-203ENST00000426538 A0A1B0GUL7 405 aa18.44■□□□□ 0.54
GINS3-203ENST00000426538 TBC1D9Q6ZT07 1266 aa18.44■□□□□ 0.54
GINS3-203ENST00000426538 CNTROBQ8N137 903 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms