RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 ARXQ96QS3 562 aa11.49□□□□□ -0.57
TPM3P4-201ENST00000425942 SRP68Q9UHB9 627 aaKnown RBP11.49□□□□□ -0.57
TPM3P4-201ENST00000425942 PARP3Q9Y6F1 533 aa11.49□□□□□ -0.57
TPM3P4-201ENST00000425942 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
TPM3P4-201ENST00000425942 DDX58O95786 925 aaKnown RBP11.48□□□□□ -0.57
TPM3P4-201ENST00000425942 MMP10P09238 476 aa11.48□□□□□ -0.57
TPM3P4-201ENST00000425942 EXOSC9Q06265 439 aaKnown RBP11.48□□□□□ -0.57
TPM3P4-201ENST00000425942 MSL1Q68DK7 614 aa11.48□□□□□ -0.57
TPM3P4-201ENST00000425942 TSPYL6Q8N831 410 aa11.48□□□□□ -0.57
TPM3P4-201ENST00000425942 BCL2L12Q9HB09 334 aa11.48□□□□□ -0.57
TPM3P4-201ENST00000425942 POLRMTO00411 1230 aaKnown RBP11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 GIGYF2Q6Y7W6 1299 aaKnown RBP11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 PLBD2Q8NHP8 589 aa11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 TBC1D2BQ9UPU7 963 aa11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 CD2APQ9Y5K6 639 aa11.47□□□□□ -0.57
TPM3P4-201ENST00000425942 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 VAMP4O75379 141 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 TM4SF1P30408 202 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 ALDH1L2Q3SY69 923 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 PARP10Q53GL7 1025 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 XAGE3Q8WTP9 111 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 SETDB2Q96T68 719 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 NYXQ9GZU5 481 aa11.46□□□□□ -0.57
TPM3P4-201ENST00000425942 CHD4Q14839 1912 aa11.45□□□□□ -0.58
TPM3P4-201ENST00000425942 ELL2O00472 640 aaPredicted RBP11.45□□□□□ -0.58
TPM3P4-201ENST00000425942 NFIXQ14938 502 aa11.45□□□□□ -0.58
TPM3P4-201ENST00000425942 TTLL7Q6ZT98 887 aa11.45□□□□□ -0.58
TPM3P4-201ENST00000425942 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
TPM3P4-201ENST00000425942 COPS6Q7L5N1 327 aa11.45□□□□□ -0.58
TPM3P4-201ENST00000425942 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
TPM3P4-201ENST00000425942 PTPRCP08575 1304 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 KIF16BQ96L93 1317 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 ST5P78524 1137 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 DDR1Q08345 913 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 FLIIQ13045 1269 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 TBC1D9BQ66K14 1250 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 CNBD1Q8NA66 436 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 OXER1Q8TDS5 423 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 ZBTB3Q9H5J0 574 aa11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 NIP7Q9Y221 180 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM3P4-201ENST00000425942 LRRC37AA6NMS7 1700 aa11.43□□□□□ -0.58
TPM3P4-201ENST00000425942 ANXA1P04083 346 aa11.43□□□□□ -0.58
TPM3P4-201ENST00000425942 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
TPM3P4-201ENST00000425942 MFSD10Q14728 455 aa11.43□□□□□ -0.58
TPM3P4-201ENST00000425942 ANKRD13DQ6ZTN6 518 aa11.43□□□□□ -0.58
TPM3P4-201ENST00000425942 PPP1R42Q7Z4L9 355 aa11.43□□□□□ -0.58
TPM3P4-201ENST00000425942 CDCA7LQ96GN5 454 aa11.43□□□□□ -0.58
TPM3P4-201ENST00000425942 ADCY9O60503 1353 aa11.42□□□□□ -0.58
TPM3P4-201ENST00000425942 TBC1D12O60347 775 aa11.42□□□□□ -0.58
TPM3P4-201ENST00000425942 SERPINB2P05120 415 aa11.42□□□□□ -0.58
TPM3P4-201ENST00000425942 TGFB2P61812 414 aa11.42□□□□□ -0.58
TPM3P4-201ENST00000425942 TRIM28Q13263 835 aaKnown RBP11.42□□□□□ -0.58
TPM3P4-201ENST00000425942 ZNF34Q8IZ26 560 aa11.42□□□□□ -0.58
TPM3P4-201ENST00000425942 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
TPM3P4-201ENST00000425942 UBN2Q6ZU65 1347 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 GOLGB1Q14789 3259 aaKnown RBP11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 NPHP1O15259 732 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 HSP90B1P14625 803 aaKnown RBP11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 NEXNQ0ZGT2 675 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 AIMP1Q12904 312 aaKnown RBP11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 FKBP5Q13451 457 aaPredicted RBP11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 TCIRG1Q13488 830 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 HLFQ16534 295 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 PRR5LQ6MZQ0 368 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 KSR2Q6VAB6 950 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 RIC3Q7Z5B4 369 aa11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 NBPF5PQ86XG9 351 aaPredicted RBP11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
TPM3P4-201ENST00000425942 FER1L6Q2WGJ9 1857 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 NTSR2O95665 410 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 PDE6BP35913 854 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 POTEEQ6S8J3 1075 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 SPRYD3Q8NCJ5 442 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 CCDC191Q8NCU4 936 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 SYT17Q9BSW7 474 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 ISCA1Q9BUE6 129 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 METTL22Q9BUU2 404 aaPredicted RBP11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 SMC4Q9NTJ3 1288 aa11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.4□□□□□ -0.58
TPM3P4-201ENST00000425942 BICDL1Q6ZP65 573 aa11.39□□□□□ -0.59
TPM3P4-201ENST00000425942 NLRP10Q86W26 655 aa11.39□□□□□ -0.59
TPM3P4-201ENST00000425942 DNAAF4Q8WXU2 420 aa11.39□□□□□ -0.59
TPM3P4-201ENST00000425942 BRIP1Q9BX63 1249 aa11.39□□□□□ -0.59
TPM3P4-201ENST00000425942 SPEF2Q9C093 1822 aa11.39□□□□□ -0.59
TPM3P4-201ENST00000425942 ABCC12Q96J65 1359 aa11.39□□□□□ -0.59
TPM3P4-201ENST00000425942 DICER1Q9UPY3 1922 aaKnown RBP11.39□□□□□ -0.59
TPM3P4-201ENST00000425942 SH3TC1Q8TE82 1336 aa11.38□□□□□ -0.59
TPM3P4-201ENST00000425942 PI4KAP2A4QPH2 592 aa11.38□□□□□ -0.59
TPM3P4-201ENST00000425942 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
TPM3P4-201ENST00000425942 PI4KAP1Q8N8J0 262 aa11.38□□□□□ -0.59
TPM3P4-201ENST00000425942 SSH1Q8WYL5 1049 aa11.38□□□□□ -0.59
TPM3P4-201ENST00000425942 UTP14AQ9BVJ6 771 aaKnown RBP11.38□□□□□ -0.59
TPM3P4-201ENST00000425942 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms