RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 PDE6BP35913 854 aa11.78□□□□□ -0.52
LINC01006-203ENST00000425712 ATP8B2P98198 1209 aa11.78□□□□□ -0.52
LINC01006-203ENST00000425712 HDAC1Q13547 482 aaPredicted RBP11.78□□□□□ -0.52
LINC01006-203ENST00000425712 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
LINC01006-203ENST00000425712 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
LINC01006-203ENST00000425712 SSH3Q8TE77 659 aa11.78□□□□□ -0.52
LINC01006-203ENST00000425712 SPON1Q9HCB6 807 aa11.78□□□□□ -0.52
LINC01006-203ENST00000425712 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
LINC01006-203ENST00000425712 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
LINC01006-203ENST00000425712 IFIT5Q13325 482 aaKnown RBP11.77□□□□□ -0.53
LINC01006-203ENST00000425712 POLA2Q14181 598 aa11.77□□□□□ -0.53
LINC01006-203ENST00000425712 CCDC57Q2TAC2 916 aa11.77□□□□□ -0.53
LINC01006-203ENST00000425712 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
LINC01006-203ENST00000425712 CRY2Q49AN0 593 aa11.77□□□□□ -0.53
LINC01006-203ENST00000425712 CCDC136Q96JN2 1154 aa11.77□□□□□ -0.53
LINC01006-203ENST00000425712 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.53
LINC01006-203ENST00000425712 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
LINC01006-203ENST00000425712 RWDD1Q9H446 243 aaPredicted RBP11.77□□□□□ -0.53
LINC01006-203ENST00000425712 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.53
LINC01006-203ENST00000425712 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 ANKRD18BA2A2Z9 1011 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 KLRG2A4D1S0 409 aaPredicted RBP11.76□□□□□ -0.53
LINC01006-203ENST00000425712 ITGA6P23229 1130 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 PTGER2P43116 358 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 TAF7LQ5H9L4 462 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
LINC01006-203ENST00000425712 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 RPGRQ92834 1020 aaKnown RBP11.76□□□□□ -0.53
LINC01006-203ENST00000425712 GREM2Q9H772 168 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 DLEC1Q9Y238 1755 aa11.76□□□□□ -0.53
LINC01006-203ENST00000425712 HSP90AB4PQ58FF6 505 aa11.75□□□□□ -0.53
LINC01006-203ENST00000425712 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
LINC01006-203ENST00000425712 SIRT2Q8IXJ6 389 aa11.75□□□□□ -0.53
LINC01006-203ENST00000425712 RBM17Q96I25 401 aaKnown RBP11.75□□□□□ -0.53
LINC01006-203ENST00000425712 COPRSQ9NQ92 184 aa11.75□□□□□ -0.53
LINC01006-203ENST00000425712 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
LINC01006-203ENST00000425712 NPR1P16066 1061 aa11.74□□□□□ -0.53
LINC01006-203ENST00000425712 IGHMBP2P38935 993 aaKnown RBP11.74□□□□□ -0.53
LINC01006-203ENST00000425712 RFX5P48382 616 aaPredicted RBP11.74□□□□□ -0.53
LINC01006-203ENST00000425712 CENPQQ7L2Z9 268 aaPredicted RBP11.74□□□□□ -0.53
LINC01006-203ENST00000425712 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
LINC01006-203ENST00000425712 CCDC85AQ96PX6 553 aaPredicted RBP11.74□□□□□ -0.53
LINC01006-203ENST00000425712 H0YIN7 160 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 HOXA10P31260 410 aaPredicted RBP11.73□□□□□ -0.53
LINC01006-203ENST00000425712 PTPN12Q05209 780 aaKnown RBP11.73□□□□□ -0.53
LINC01006-203ENST00000425712 GRAPQ13588 217 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 STYK1Q6J9G0 422 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 TMC4Q7Z404 712 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 GRAPLQ8TC17 118 aaPredicted RBP11.73□□□□□ -0.53
LINC01006-203ENST00000425712 MASTLQ96GX5 879 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 NOP58Q9Y2X3 529 aaKnown RBP11.73□□□□□ -0.53
LINC01006-203ENST00000425712 CD2APQ9Y5K6 639 aa11.73□□□□□ -0.53
LINC01006-203ENST00000425712 KIAA1551Q9HCM1 1747 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 RAB11FIP3O75154 756 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
LINC01006-203ENST00000425712 CIAO1O76071 339 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 SRGNP10124 158 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 ALDH1B1P30837 517 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 TGFB2P61812 414 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC01006-203ENST00000425712 OS9Q13438 667 aaPredicted RBP11.72□□□□□ -0.53
LINC01006-203ENST00000425712 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 DCTPP1Q9H773 170 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 SEC31BQ9NQW1 1179 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 LRRC37AA6NMS7 1700 aa11.72□□□□□ -0.53
LINC01006-203ENST00000425712 KDM2BQ8NHM5 1336 aa11.71□□□□□ -0.53
LINC01006-203ENST00000425712 EYA2O00167 538 aa11.71□□□□□ -0.53
LINC01006-203ENST00000425712 IL15P40933 162 aaPredicted RBP11.71□□□□□ -0.53
LINC01006-203ENST00000425712 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
LINC01006-203ENST00000425712 SMC5Q8IY18 1101 aa11.71□□□□□ -0.53
LINC01006-203ENST00000425712 CNKSR1Q969H4 720 aa11.71□□□□□ -0.53
LINC01006-203ENST00000425712 CNNM1Q9NRU3 951 aa11.71□□□□□ -0.53
LINC01006-203ENST00000425712 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
LINC01006-203ENST00000425712 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.53
LINC01006-203ENST00000425712 BBOX1O75936 387 aa11.7□□□□□ -0.54
LINC01006-203ENST00000425712 IGHDP01880 384 aa11.7□□□□□ -0.54
LINC01006-203ENST00000425712 RPS8P62241 208 aaKnown RBP11.7□□□□□ -0.54
LINC01006-203ENST00000425712 LDHAL6AQ6ZMR3 332 aa11.7□□□□□ -0.54
LINC01006-203ENST00000425712 KLHDC4Q8TBB5 520 aa11.7□□□□□ -0.54
LINC01006-203ENST00000425712 CELF1Q92879 486 aaKnown RBP11.7□□□□□ -0.54
LINC01006-203ENST00000425712 KIF1BPQ96EK5 621 aa11.7□□□□□ -0.54
LINC01006-203ENST00000425712 ZNF594Q96JF6 807 aaPredicted RBP11.7□□□□□ -0.54
LINC01006-203ENST00000425712 SIL1Q9H173 461 aa11.7□□□□□ -0.54
LINC01006-203ENST00000425712 BSDC1Q9NW68 430 aaPredicted RBP11.7□□□□□ -0.54
LINC01006-203ENST00000425712 PPP1R1BQ9UD71 204 aaPredicted RBP11.7□□□□□ -0.54
LINC01006-203ENST00000425712 EXOC6BQ9Y2D4 811 aa11.7□□□□□ -0.54
LINC01006-203ENST00000425712 MROH5Q6ZUA9 1318 aa11.69□□□□□ -0.54
LINC01006-203ENST00000425712 PPEF1O14829 653 aaPredicted RBP11.69□□□□□ -0.54
LINC01006-203ENST00000425712 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
LINC01006-203ENST00000425712 ZNF622Q969S3 477 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC01006-203ENST00000425712 LRRCC1Q9C099 1032 aa11.69□□□□□ -0.54
LINC01006-203ENST00000425712 TMX4Q9H1E5 349 aaPredicted RBP11.69□□□□□ -0.54
LINC01006-203ENST00000425712 A0A1B0GUL6 1792 aa11.69□□□□□ -0.54
LINC01006-203ENST00000425712 COL4A1P02462 1669 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms