RNA–Protein interactions for RNA: ENST00000425237.5

NEK6-208, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-208ENST00000425237 CRBNQ96SW2 442 aa14.4□□□□□ -0.1
NEK6-208ENST00000425237 BICC1Q9H694 974 aaKnown RBP14.4□□□□□ -0.1
NEK6-208ENST00000425237 RTL9Q8NET4 1388 aa14.39□□□□□ -0.11
NEK6-208ENST00000425237 DPEP1P16444 411 aa14.39□□□□□ -0.11
NEK6-208ENST00000425237 KCNA3P22001 575 aa14.39□□□□□ -0.11
NEK6-208ENST00000425237 LMBR1LQ6UX01 489 aa14.39□□□□□ -0.11
NEK6-208ENST00000425237 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
NEK6-208ENST00000425237 ANKRD44Q8N8A2 993 aa14.39□□□□□ -0.11
NEK6-208ENST00000425237 RPGRQ92834 1020 aaKnown RBP14.39□□□□□ -0.11
NEK6-208ENST00000425237 RBM17Q96I25 401 aaKnown RBP14.39□□□□□ -0.11
NEK6-208ENST00000425237 CRAMP1Q96RY5 1269 aa14.39□□□□□ -0.11
NEK6-208ENST00000425237 SYT17Q9BSW7 474 aa14.39□□□□□ -0.11
NEK6-208ENST00000425237 LRRFIP2Q9Y608 721 aaKnown RBP14.39□□□□□ -0.11
NEK6-208ENST00000425237 A0A0G2JLW4 131 aa14.38□□□□□ -0.11
NEK6-208ENST00000425237 CHRNA5P30532 468 aa14.38□□□□□ -0.11
NEK6-208ENST00000425237 MTX1Q13505 466 aa14.38□□□□□ -0.11
NEK6-208ENST00000425237 DDX46Q7L014 1031 aaKnown RBP14.38□□□□□ -0.11
NEK6-208ENST00000425237 CNKSR1Q969H4 720 aa14.38□□□□□ -0.11
NEK6-208ENST00000425237 KIF13BQ9NQT8 1826 aa14.38□□□□□ -0.11
NEK6-208ENST00000425237 ALDH1B1P30837 517 aa14.37□□□□□ -0.11
NEK6-208ENST00000425237 NLGN2Q8NFZ4 835 aa14.37□□□□□ -0.11
NEK6-208ENST00000425237 ZNF622Q969S3 477 aaKnown RBP eCLIP14.37□□□□□ -0.11
NEK6-208ENST00000425237 GREM2Q9H772 168 aa14.37□□□□□ -0.11
NEK6-208ENST00000425237 ANKRD31Q8N7Z5 1873 aa14.36□□□□□ -0.11
NEK6-208ENST00000425237 IFIT5Q13325 482 aaKnown RBP14.36□□□□□ -0.11
NEK6-208ENST00000425237 GRAPQ13588 217 aa14.36□□□□□ -0.11
NEK6-208ENST00000425237 CCDC57Q2TAC2 916 aa14.36□□□□□ -0.11
NEK6-208ENST00000425237 GRAPLQ8TC17 118 aaPredicted RBP14.36□□□□□ -0.11
NEK6-208ENST00000425237 CDC5LQ99459 802 aaKnown RBP14.36□□□□□ -0.11
NEK6-208ENST00000425237 PIM2Q9P1W9 311 aa14.36□□□□□ -0.11
NEK6-208ENST00000425237 TNRC6CQ9HCJ0 1690 aaKnown RBP14.36□□□□□ -0.11
NEK6-208ENST00000425237 DDX60Q8IY21 1712 aaKnown RBP14.35□□□□□ -0.11
NEK6-208ENST00000425237 LAMB2P55268 1798 aa14.35□□□□□ -0.11
NEK6-208ENST00000425237 ANKRD18BA2A2Z9 1011 aa14.35□□□□□ -0.11
NEK6-208ENST00000425237 BBOX1O75936 387 aa14.35□□□□□ -0.11
NEK6-208ENST00000425237 ITGA6P23229 1130 aa14.35□□□□□ -0.11
NEK6-208ENST00000425237 ATP8B2P98198 1209 aa14.35□□□□□ -0.11
NEK6-208ENST00000425237 FAM161AQ3B820 660 aa14.35□□□□□ -0.11
NEK6-208ENST00000425237 RPAP2Q8IXW5 612 aaPredicted RBP14.35□□□□□ -0.11
NEK6-208ENST00000425237 TTLL6Q8N841 843 aa14.35□□□□□ -0.11
NEK6-208ENST00000425237 CCDC85AQ96PX6 553 aaPredicted RBP14.35□□□□□ -0.11
NEK6-208ENST00000425237 CHMP3Q9Y3E7 222 aa14.35□□□□□ -0.11
NEK6-208ENST00000425237 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
NEK6-208ENST00000425237 CEP85Q6P2H3 762 aa14.34□□□□□ -0.11
NEK6-208ENST00000425237 TMC4Q7Z404 712 aa14.34□□□□□ -0.11
NEK6-208ENST00000425237 EXOC6Q8TAG9 804 aa14.34□□□□□ -0.11
NEK6-208ENST00000425237 C1orf115Q9H7X2 142 aa14.34□□□□□ -0.11
NEK6-208ENST00000425237 SEC31BQ9NQW1 1179 aa14.34□□□□□ -0.11
NEK6-208ENST00000425237 RFX5P48382 616 aaPredicted RBP14.33□□□□□ -0.12
NEK6-208ENST00000425237 ANKRD18AQ8IVF6 992 aa14.33□□□□□ -0.12
NEK6-208ENST00000425237 CELF1Q92879 486 aaKnown RBP14.33□□□□□ -0.12
NEK6-208ENST00000425237 SRGAP3O43295 1099 aa14.32□□□□□ -0.12
NEK6-208ENST00000425237 IGHMBP2P38935 993 aaKnown RBP14.32□□□□□ -0.12
NEK6-208ENST00000425237 IRX6P78412 446 aaPredicted RBP14.32□□□□□ -0.12
NEK6-208ENST00000425237 POLA2Q14181 598 aa14.32□□□□□ -0.12
NEK6-208ENST00000425237 DALRD3Q5D0E6 543 aaKnown RBP14.32□□□□□ -0.12
NEK6-208ENST00000425237 PRPF40BQ6NWY9 871 aaKnown RBP14.32□□□□□ -0.12
NEK6-208ENST00000425237 SSH3Q8TE77 659 aa14.32□□□□□ -0.12
NEK6-208ENST00000425237 C7orf43Q8WVR3 580 aa14.32□□□□□ -0.12
NEK6-208ENST00000425237 BSDC1Q9NW68 430 aaPredicted RBP14.32□□□□□ -0.12
NEK6-208ENST00000425237 KIAA1551Q9HCM1 1747 aa14.32□□□□□ -0.12
NEK6-208ENST00000425237 CHD4Q14839 1912 aa14.31□□□□□ -0.12
NEK6-208ENST00000425237 PNMA6EA0A0J9YXQ4 647 aa14.31□□□□□ -0.12
NEK6-208ENST00000425237 PPEF1O14829 653 aaPredicted RBP14.31□□□□□ -0.12
NEK6-208ENST00000425237 NEFLP07196 543 aa14.31□□□□□ -0.12
NEK6-208ENST00000425237 PTPN12Q05209 780 aaKnown RBP14.31□□□□□ -0.12
NEK6-208ENST00000425237 TAF7LQ5H9L4 462 aa14.31□□□□□ -0.12
NEK6-208ENST00000425237 CC2D2BQ6DHV5 1058 aa14.31□□□□□ -0.12
NEK6-208ENST00000425237 COPRSQ9NQ92 184 aa14.31□□□□□ -0.12
NEK6-208ENST00000425237 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
NEK6-208ENST00000425237 COL11A2P13942 1736 aaPredicted RBP14.3□□□□□ -0.12
NEK6-208ENST00000425237 HMMRO75330 724 aa14.3□□□□□ -0.12
NEK6-208ENST00000425237 SIRT2Q8IXJ6 389 aa14.3□□□□□ -0.12
NEK6-208ENST00000425237 SP8Q8IXZ3 490 aa14.3□□□□□ -0.12
NEK6-208ENST00000425237 MPHOSPH8Q99549 860 aa14.3□□□□□ -0.12
NEK6-208ENST00000425237 ATP6V0A2Q9Y487 856 aa14.3□□□□□ -0.12
NEK6-208ENST00000425237 PCDHB15Q9Y5E8 787 aa14.3□□□□□ -0.12
NEK6-208ENST00000425237 MYH3P11055 1940 aa14.29□□□□□ -0.12
NEK6-208ENST00000425237 GRIPAP1Q4V328 841 aa14.29□□□□□ -0.12
NEK6-208ENST00000425237 SOGA3Q5TF21 947 aa14.29□□□□□ -0.12
NEK6-208ENST00000425237 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
NEK6-208ENST00000425237 TMX4Q9H1E5 349 aaPredicted RBP14.29□□□□□ -0.12
NEK6-208ENST00000425237 BCS1LQ9Y276 419 aa14.29□□□□□ -0.12
NEK6-208ENST00000425237 CIAO1O76071 339 aa14.28□□□□□ -0.12
NEK6-208ENST00000425237 ZNF594Q96JF6 807 aaPredicted RBP14.28□□□□□ -0.12
NEK6-208ENST00000425237 MINPP1Q9UNW1 487 aa14.28□□□□□ -0.12
NEK6-208ENST00000425237 DLEC1Q9Y238 1755 aa14.28□□□□□ -0.12
NEK6-208ENST00000425237 NOP58Q9Y2X3 529 aaKnown RBP14.28□□□□□ -0.12
NEK6-208ENST00000425237 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
NEK6-208ENST00000425237 EYA2O00167 538 aa14.27□□□□□ -0.13
NEK6-208ENST00000425237 C21orf2O43822 256 aa14.27□□□□□ -0.13
NEK6-208ENST00000425237 GPR162Q16538 588 aa14.27□□□□□ -0.13
NEK6-208ENST00000425237 CCDC93Q567U6 631 aa14.27□□□□□ -0.13
NEK6-208ENST00000425237 ERICH6BQ5W0A0 696 aa14.27□□□□□ -0.13
NEK6-208ENST00000425237 KLHDC4Q8TBB5 520 aa14.27□□□□□ -0.13
NEK6-208ENST00000425237 CNNM1Q9NRU3 951 aa14.27□□□□□ -0.13
NEK6-208ENST00000425237 PA2G4Q9UQ80 394 aaKnown RBP14.27□□□□□ -0.13
NEK6-208ENST00000425237 GRIN3BO60391 1043 aa14.26□□□□□ -0.13
NEK6-208ENST00000425237 IL15P40933 162 aaPredicted RBP14.26□□□□□ -0.13
NEK6-208ENST00000425237 HDAC1Q13547 482 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms