RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 ABCC4O15439 1325 aa20.55■□□□□ 0.88
RPUSD3-204ENST00000424438 MYL6BP14649 208 aa20.55■□□□□ 0.88
RPUSD3-204ENST00000424438 TMC4Q7Z404 712 aa20.55■□□□□ 0.88
RPUSD3-204ENST00000424438 LRRC37AA6NMS7 1700 aa20.55■□□□□ 0.88
RPUSD3-204ENST00000424438 CELF2O95319 508 aaKnown RBP20.54■□□□□ 0.88
RPUSD3-204ENST00000424438 TNIP1Q15025 636 aa20.54■□□□□ 0.88
RPUSD3-204ENST00000424438 HSP90AB3PQ58FF7 597 aa20.54■□□□□ 0.88
RPUSD3-204ENST00000424438 CIAPIN1Q6FI81 312 aa20.54■□□□□ 0.88
RPUSD3-204ENST00000424438 GMPSP49915 693 aaPredicted RBP20.53■□□□□ 0.88
RPUSD3-204ENST00000424438 PDIA6Q15084 440 aa20.53■□□□□ 0.88
RPUSD3-204ENST00000424438 PRPF38BQ5VTL8 546 aaKnown RBP20.53■□□□□ 0.88
RPUSD3-204ENST00000424438 CASP8AP2Q9UKL3 1982 aa20.53■□□□□ 0.88
RPUSD3-204ENST00000424438 DPP8Q6V1X1 898 aaPredicted RBP20.52■□□□□ 0.88
RPUSD3-204ENST00000424438 CDC37L1Q7L3B6 337 aa20.52■□□□□ 0.88
RPUSD3-204ENST00000424438 MPNDQ8N594 471 aa20.52■□□□□ 0.88
RPUSD3-204ENST00000424438 SOX10P56693 466 aa20.51■□□□□ 0.87
RPUSD3-204ENST00000424438 NOGQ13253 232 aa20.51■□□□□ 0.87
RPUSD3-204ENST00000424438 SLC51AQ86UW1 340 aa20.51■□□□□ 0.87
RPUSD3-204ENST00000424438 DUOX1Q9NRD9 1551 aa20.51■□□□□ 0.87
RPUSD3-204ENST00000424438 DPF2Q92785 391 aa20.5■□□□□ 0.87
RPUSD3-204ENST00000424438 GLIS2Q9BZE0 524 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-204ENST00000424438 TNRC18O15417 2968 aaPredicted RBP20.49■□□□□ 0.87
RPUSD3-204ENST00000424438 HIRAP54198 1017 aaPredicted RBP20.49■□□□□ 0.87
RPUSD3-204ENST00000424438 GRAPQ13588 217 aa20.49■□□□□ 0.87
RPUSD3-204ENST00000424438 NLRP10Q86W26 655 aa20.49■□□□□ 0.87
RPUSD3-204ENST00000424438 GRAPLQ8TC17 118 aaPredicted RBP20.49■□□□□ 0.87
RPUSD3-204ENST00000424438 ZNF408Q9H9D4 720 aa20.49■□□□□ 0.87
RPUSD3-204ENST00000424438 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
RPUSD3-204ENST00000424438 DDX46Q7L014 1031 aaKnown RBP20.48■□□□□ 0.87
RPUSD3-204ENST00000424438 THUMPD2Q9BTF0 503 aaKnown RBP20.48■□□□□ 0.87
RPUSD3-204ENST00000424438 BCL2L13Q9BXK5 485 aa20.48■□□□□ 0.87
RPUSD3-204ENST00000424438 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
RPUSD3-204ENST00000424438 DDX60Q8IY21 1712 aaKnown RBP20.47■□□□□ 0.87
RPUSD3-204ENST00000424438 CNOT7Q9UIV1 285 aaKnown RBP20.47■□□□□ 0.87
RPUSD3-204ENST00000424438 TSPYL4Q9UJ04 414 aa20.47■□□□□ 0.87
RPUSD3-204ENST00000424438 SH3TC1Q8TE82 1336 aa20.47■□□□□ 0.87
RPUSD3-204ENST00000424438 H7C1D1 291 aa20.46■□□□□ 0.87
RPUSD3-204ENST00000424438 TCIRG1Q13488 830 aa20.46■□□□□ 0.87
RPUSD3-204ENST00000424438 TRPM4Q8TD43 1214 aa20.46■□□□□ 0.87
RPUSD3-204ENST00000424438 RAD17O75943 681 aa20.45■□□□□ 0.86
RPUSD3-204ENST00000424438 RPS12P25398 132 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-204ENST00000424438 SAGE1Q9NXZ1 904 aa20.45■□□□□ 0.86
RPUSD3-204ENST00000424438 POLR2AP24928 1970 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-204ENST00000424438 YDJCA8MPS7 323 aa20.44■□□□□ 0.86
RPUSD3-204ENST00000424438 PROSER3Q2NL68 480 aa20.44■□□□□ 0.86
RPUSD3-204ENST00000424438 TAF1P21675 1872 aa20.43■□□□□ 0.86
RPUSD3-204ENST00000424438 HCLS1P14317 486 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-204ENST00000424438 LMOD3Q0VAK6 560 aa20.43■□□□□ 0.86
RPUSD3-204ENST00000424438 COPS6Q7L5N1 327 aa20.43■□□□□ 0.86
RPUSD3-204ENST00000424438 TRMT112Q9UI30 125 aaKnown RBP20.43■□□□□ 0.86
RPUSD3-204ENST00000424438 ZNF609O15014 1411 aa20.43■□□□□ 0.86
RPUSD3-204ENST00000424438 EIF2S2P20042 333 aaKnown RBP20.42■□□□□ 0.86
RPUSD3-204ENST00000424438 HUNKP57058 714 aa20.42■□□□□ 0.86
RPUSD3-204ENST00000424438 MICALL2Q8IY33 904 aa20.42■□□□□ 0.86
RPUSD3-204ENST00000424438 AKAP11Q9UKA4 1901 aa20.41■□□□□ 0.86
RPUSD3-204ENST00000424438 SF3B3Q15393 1217 aaKnown RBP20.41■□□□□ 0.86
RPUSD3-204ENST00000424438 XAGE3Q8WTP9 111 aa20.41■□□□□ 0.86
RPUSD3-204ENST00000424438 CCDC102AQ96A19 550 aa20.41■□□□□ 0.86
RPUSD3-204ENST00000424438 RGMBQ6NW40 437 aa20.4■□□□□ 0.86
RPUSD3-204ENST00000424438 FAM155AB1AL88 458 aaPredicted RBP20.39■□□□□ 0.85
RPUSD3-204ENST00000424438 HOXB7P09629 217 aa20.39■□□□□ 0.85
RPUSD3-204ENST00000424438 WASHC4Q2M389 1173 aa20.39■□□□□ 0.85
RPUSD3-204ENST00000424438 USP48Q86UV5 1035 aa20.39■□□□□ 0.85
RPUSD3-204ENST00000424438 PSMD14O00487 310 aa20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 ANXA1P04083 346 aa20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 RIPK4P57078 832 aa20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 TRIM28Q13263 835 aaKnown RBP20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 KRT26Q7Z3Y9 468 aa20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 REM2Q8IYK8 340 aaPredicted RBP20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 C2orf69Q8N8R5 385 aa20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 PLBD2Q8NHP8 589 aa20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 GCC1Q96CN9 775 aa20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 GBA2Q9HCG7 927 aaPredicted RBP20.38■□□□□ 0.85
RPUSD3-204ENST00000424438 PSME4Q14997 1843 aa20.37■□□□□ 0.85
RPUSD3-204ENST00000424438 ZIC5Q96T25 663 aa20.37■□□□□ 0.85
RPUSD3-204ENST00000424438 EYA3Q99504 573 aa20.37■□□□□ 0.85
RPUSD3-204ENST00000424438 ISCA1Q9BUE6 129 aa20.37■□□□□ 0.85
RPUSD3-204ENST00000424438 SHTN1A0MZ66 631 aa20.36■□□□□ 0.85
RPUSD3-204ENST00000424438 CHL1O00533 1208 aa20.36■□□□□ 0.85
RPUSD3-204ENST00000424438 TMPOP42166 694 aaKnown RBP20.36■□□□□ 0.85
RPUSD3-204ENST00000424438 CTU1Q7Z7A3 348 aaKnown RBP20.36■□□□□ 0.85
RPUSD3-204ENST00000424438 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
RPUSD3-204ENST00000424438 DCPSQ96C86 337 aaKnown RBP20.36■□□□□ 0.85
RPUSD3-204ENST00000424438 SCN9AQ15858 1988 aa20.35■□□□□ 0.85
RPUSD3-204ENST00000424438 TRPA1O75762 1119 aa20.35■□□□□ 0.85
RPUSD3-204ENST00000424438 AIMP1Q12904 312 aaKnown RBP20.35■□□□□ 0.85
RPUSD3-204ENST00000424438 SAMD7Q7Z3H4 446 aa20.35■□□□□ 0.85
RPUSD3-204ENST00000424438 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
RPUSD3-204ENST00000424438 ZBTB12Q9Y330 459 aaPredicted RBP20.35■□□□□ 0.85
RPUSD3-204ENST00000424438 RTL9Q8NET4 1388 aa20.34■□□□□ 0.85
RPUSD3-204ENST00000424438 VIL1P09327 827 aaKnown RBP20.34■□□□□ 0.85
RPUSD3-204ENST00000424438 CELF1Q92879 486 aaKnown RBP20.34■□□□□ 0.85
RPUSD3-204ENST00000424438 POLLQ9UGP5 575 aa20.34■□□□□ 0.85
RPUSD3-204ENST00000424438 NSFL1CQ9UNZ2 370 aaKnown RBP20.34■□□□□ 0.85
RPUSD3-204ENST00000424438 ECE2O60344 883 aa20.33■□□□□ 0.85
RPUSD3-204ENST00000424438 SLC10A3P09131 477 aa20.33■□□□□ 0.85
RPUSD3-204ENST00000424438 FKBP1BP68106 108 aa20.33■□□□□ 0.85
RPUSD3-204ENST00000424438 TBC1D10BQ4KMP7 808 aaPredicted RBP20.33■□□□□ 0.85
RPUSD3-204ENST00000424438 ANKRD13DQ6ZTN6 518 aa20.33■□□□□ 0.85
RPUSD3-204ENST00000424438 DBNDD1Q9H9R9 158 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms