RNA–Protein interactions for RNA: ENST00000424415.1

FAM239B-202, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 2 BASIC

Gene FAM239B, Length 2,194 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-202ENST00000424415 IL15P40933 162 aaPredicted RBP12.47□□□□□ -0.41
FAM239B-202ENST00000424415 CASP7P55210 303 aa12.47□□□□□ -0.41
FAM239B-202ENST00000424415 UVSSAQ2YD98 709 aa12.47□□□□□ -0.41
FAM239B-202ENST00000424415 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
FAM239B-202ENST00000424415 USP48Q86UV5 1035 aa12.47□□□□□ -0.41
FAM239B-202ENST00000424415 CABLES1Q8TDN4 633 aa12.47□□□□□ -0.41
FAM239B-202ENST00000424415 FAM227BQ96M60 508 aa12.47□□□□□ -0.41
FAM239B-202ENST00000424415 SYCE3A1L190 88 aa12.46□□□□□ -0.41
FAM239B-202ENST00000424415 CIAO1O76071 339 aa12.46□□□□□ -0.41
FAM239B-202ENST00000424415 IL2RBP14784 551 aa12.46□□□□□ -0.41
FAM239B-202ENST00000424415 RPS6KB1P23443 525 aa12.46□□□□□ -0.41
FAM239B-202ENST00000424415 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
FAM239B-202ENST00000424415 FOXD4L5Q5VV16 416 aaPredicted RBP12.46□□□□□ -0.41
FAM239B-202ENST00000424415 BRINP3Q76B58 766 aa12.46□□□□□ -0.41
FAM239B-202ENST00000424415 FOXD4L4Q8WXT5 416 aaPredicted RBP12.46□□□□□ -0.41
FAM239B-202ENST00000424415 RBSNQ9H1K0 784 aa12.46□□□□□ -0.41
FAM239B-202ENST00000424415 DBNLQ9UJU6 430 aaKnown RBP12.46□□□□□ -0.41
FAM239B-202ENST00000424415 GLI3P10071 1580 aa12.46□□□□□ -0.41
FAM239B-202ENST00000424415 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.42
FAM239B-202ENST00000424415 MSNP26038 577 aaKnown RBP12.46□□□□□ -0.42
FAM239B-202ENST00000424415 GJB2P29033 226 aa12.46□□□□□ -0.42
FAM239B-202ENST00000424415 TFCP2Q12800 502 aa12.46□□□□□ -0.42
FAM239B-202ENST00000424415 TLR7Q9NYK1 1049 aaKnown RBP12.46□□□□□ -0.42
FAM239B-202ENST00000424415 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.42
FAM239B-202ENST00000424415 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.42
FAM239B-202ENST00000424415 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.42
FAM239B-202ENST00000424415 PALLDQ8WX93 1383 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 A0A0D9SFI3 127 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 TAF5LO75529 589 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 MCMDC2Q4G0Z9 681 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 CCDC83Q8IWF9 413 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.45□□□□□ -0.42
FAM239B-202ENST00000424415 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
FAM239B-202ENST00000424415 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
FAM239B-202ENST00000424415 SH3TC1Q8TE82 1336 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 PAPPAQ13219 1627 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 KBTBD3Q8NAB2 608 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 HELLSQ9NRZ9 838 aa12.45□□□□□ -0.42
FAM239B-202ENST00000424415 LMBR1LQ6UX01 489 aa12.44□□□□□ -0.42
FAM239B-202ENST00000424415 CCDC39Q9UFE4 941 aa12.44□□□□□ -0.42
FAM239B-202ENST00000424415 MTMR6Q9Y217 621 aa12.44□□□□□ -0.42
FAM239B-202ENST00000424415 KIF3AQ9Y496 699 aa12.44□□□□□ -0.42
FAM239B-202ENST00000424415 KCPQ6ZWJ8 1503 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 KRT85P78386 507 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 FOXO4P98177 505 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 TRIM28Q13263 835 aaKnown RBP12.43□□□□□ -0.42
FAM239B-202ENST00000424415 ME3Q16798 604 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 KLHDC4Q8TBB5 520 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 ELP1O95163 1332 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 PTCD1O75127 700 aaKnown RBP12.43□□□□□ -0.42
FAM239B-202ENST00000424415 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
FAM239B-202ENST00000424415 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
FAM239B-202ENST00000424415 NEK1Q96PY6 1258 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 DSCC1Q9BVC3 393 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 SCAND2PQ9GZW5 306 aaPredicted RBP12.42□□□□□ -0.42
FAM239B-202ENST00000424415 SLAIN2Q9P270 581 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 TPCN1Q9ULQ1 816 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 NOL7Q9UMY1 257 aaKnown RBP12.42□□□□□ -0.42
FAM239B-202ENST00000424415 AKAP2Q9Y2D5 859 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 EYA2O00167 538 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 NBPF14Q5TI25 921 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 NBPF10Q6P3W6 841 aaKnown RBP12.42□□□□□ -0.42
FAM239B-202ENST00000424415 NBPF15Q8N660 670 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
FAM239B-202ENST00000424415 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
FAM239B-202ENST00000424415 CNPY2Q9Y2B0 182 aa12.42□□□□□ -0.42
FAM239B-202ENST00000424415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.42□□□□□ -0.42
FAM239B-202ENST00000424415 NUP188Q5SRE5 1749 aa12.41□□□□□ -0.42
FAM239B-202ENST00000424415 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
FAM239B-202ENST00000424415 LARGE1O95461 756 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 CPA1P15085 419 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 ZNF589Q86UQ0 364 aaPredicted RBP12.4□□□□□ -0.42
FAM239B-202ENST00000424415 DNAJC2Q99543 621 aaKnown RBP12.4□□□□□ -0.42
FAM239B-202ENST00000424415 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
FAM239B-202ENST00000424415 GADD45BO75293 160 aaPredicted RBP12.4□□□□□ -0.42
FAM239B-202ENST00000424415 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.42
FAM239B-202ENST00000424415 EVA1CP58658 441 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 ATG9AQ7Z3C6 839 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 ISCA1Q9BUE6 129 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 PLA2G12BQ9BX93 195 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 TMOD3Q9NYL9 352 aa12.4□□□□□ -0.42
FAM239B-202ENST00000424415 ZNF609O15014 1411 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 STARD3NLO95772 234 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 TOB2Q14106 344 aaPredicted RBP12.39□□□□□ -0.43
FAM239B-202ENST00000424415 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 HSP90AB3PQ58FF7 597 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.39□□□□□ -0.43
FAM239B-202ENST00000424415 GTF3C6Q969F1 213 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 ZSCAN16Q9H4T2 348 aaPredicted RBP12.39□□□□□ -0.43
FAM239B-202ENST00000424415 CEP126Q9P2H0 1117 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 FIBPO43427 364 aa12.39□□□□□ -0.43
FAM239B-202ENST00000424415 ZNF500O60304 480 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms