RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 CCDC125Q86Z20 511 aa9.15□□□□□ -0.94
EPHA4-206ENST00000424339 SLC52A2Q9HAB3 445 aa9.15□□□□□ -0.94
EPHA4-206ENST00000424339 TMOD3Q9NYL9 352 aa9.15□□□□□ -0.94
EPHA4-206ENST00000424339 KAT6BQ8WYB5 2073 aa9.15□□□□□ -0.94
EPHA4-206ENST00000424339 NEUROD2Q15784 382 aa9.14□□□□□ -0.95
EPHA4-206ENST00000424339 LCE2CQ5TA81 110 aa9.14□□□□□ -0.95
EPHA4-206ENST00000424339 MPRIPQ6WCQ1 1025 aa9.14□□□□□ -0.95
EPHA4-206ENST00000424339 WWC1Q8IX03 1113 aa9.14□□□□□ -0.95
EPHA4-206ENST00000424339 FAM160A2Q8N612 972 aaPredicted RBP9.14□□□□□ -0.95
EPHA4-206ENST00000424339 IL17REQ8NFR9 667 aa9.14□□□□□ -0.95
EPHA4-206ENST00000424339 SMARCC1Q92922 1105 aaPredicted RBP9.14□□□□□ -0.95
EPHA4-206ENST00000424339 KIFC2Q96AC6 838 aa9.14□□□□□ -0.95
EPHA4-206ENST00000424339 YTHDC1Q96MU7 727 aaKnown RBP9.14□□□□□ -0.95
EPHA4-206ENST00000424339 ITGB4P16144 1822 aa9.14□□□□□ -0.95
EPHA4-206ENST00000424339 SIPA1L3O60292 1781 aaPredicted RBP9.14□□□□□ -0.95
EPHA4-206ENST00000424339 TOGARAM1Q9Y4F4 1720 aa9.14□□□□□ -0.95
EPHA4-206ENST00000424339 ZBED9Q6R2W3 1325 aa9.13□□□□□ -0.95
EPHA4-206ENST00000424339 WNT7AO00755 349 aa9.13□□□□□ -0.95
EPHA4-206ENST00000424339 GNAI1P63096 354 aa9.13□□□□□ -0.95
EPHA4-206ENST00000424339 HNRNPUQ00839 825 aaKnown RBP eCLIP9.13□□□□□ -0.95
EPHA4-206ENST00000424339 TAF7Q15545 349 aaPredicted RBP9.13□□□□□ -0.95
EPHA4-206ENST00000424339 MORN1Q5T089 497 aa9.13□□□□□ -0.95
EPHA4-206ENST00000424339 CHMP4AQ9BY43 222 aa9.13□□□□□ -0.95
EPHA4-206ENST00000424339 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
EPHA4-206ENST00000424339 RRP7AQ9Y3A4 280 aaKnown RBP9.13□□□□□ -0.95
EPHA4-206ENST00000424339 RGPD3A6NKT7 1758 aaPredicted RBP9.12□□□□□ -0.95
EPHA4-206ENST00000424339 RGPD4Q7Z3J3 1758 aa9.12□□□□□ -0.95
EPHA4-206ENST00000424339 ZNF521Q96K83 1311 aa9.12□□□□□ -0.95
EPHA4-206ENST00000424339 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
EPHA4-206ENST00000424339 MCM10Q7L590 875 aa9.12□□□□□ -0.95
EPHA4-206ENST00000424339 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
EPHA4-206ENST00000424339 PXYLP1Q8TE99 480 aa9.12□□□□□ -0.95
EPHA4-206ENST00000424339 THAP11Q96EK4 314 aa9.12□□□□□ -0.95
EPHA4-206ENST00000424339 SOS1Q07889 1333 aaPredicted RBP9.11□□□□□ -0.95
EPHA4-206ENST00000424339 ZNF831Q5JPB2 1677 aa9.11□□□□□ -0.95
EPHA4-206ENST00000424339 BTAF1O14981 1849 aa9.11□□□□□ -0.95
EPHA4-206ENST00000424339 SF3B2Q13435 895 aaKnown RBP9.11□□□□□ -0.95
EPHA4-206ENST00000424339 TTC5Q8N0Z6 440 aa9.11□□□□□ -0.95
EPHA4-206ENST00000424339 NFATC2IPQ8NCF5 419 aa9.11□□□□□ -0.95
EPHA4-206ENST00000424339 ARHGEF1Q92888 912 aaKnown RBP9.11□□□□□ -0.95
EPHA4-206ENST00000424339 SYTL4Q96C24 671 aaPredicted RBP9.11□□□□□ -0.95
EPHA4-206ENST00000424339 MYH16Q9H6N6 1097 aa9.11□□□□□ -0.95
EPHA4-206ENST00000424339 LGR6Q9HBX8 967 aa9.11□□□□□ -0.95
EPHA4-206ENST00000424339 PAPPAQ13219 1627 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 BTBD11A6QL63 1104 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 E9PSI1 815 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 J3QL48 77 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 CHL1O00533 1208 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 PLSCR1O15162 318 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 FUT2Q10981 343 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 PIGBQ92521 554 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 SLC27A5Q9Y2P5 690 aa9.1□□□□□ -0.95
EPHA4-206ENST00000424339 KDM3BQ7LBC6 1761 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 UBR2Q8IWV8 1755 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 CICQ96RK0 1608 aaPredicted RBP9.09□□□□□ -0.95
EPHA4-206ENST00000424339 TNS1Q9HBL0 1735 aaKnown RBP9.09□□□□□ -0.95
EPHA4-206ENST00000424339 LOC100996750A0A140TA64 210 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 TRIM37O94972 964 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 ZNF853P0CG23 659 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 DCTN1Q14203 1278 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 ZNF790Q6PG37 636 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 ACSBG1Q96GR2 724 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 TSPYL4Q9UJ04 414 aa9.09□□□□□ -0.95
EPHA4-206ENST00000424339 KCNQ2O43526 872 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 HOXB7P09629 217 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 FECHP22830 423 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 BAG6P46379 1132 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 SLC27A3Q5K4L6 730 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 FAM182BQ5T319 152 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 ZSCAN1Q8NBB4 408 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 MRGPRX2Q96LB1 330 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 THUMPD2Q9BTF0 503 aaKnown RBP9.08□□□□□ -0.96
EPHA4-206ENST00000424339 TEX13AQ9BXU3 409 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-206ENST00000424339 SALL2Q9Y467 1007 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-206ENST00000424339 PALLDQ8WX93 1383 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 LY75O60449 1722 aa9.08□□□□□ -0.96
EPHA4-206ENST00000424339 CT47B1P0C2W7 299 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-206ENST00000424339 BRICD5Q6PL45 260 aa9.07□□□□□ -0.96
EPHA4-206ENST00000424339 HPS1Q92902 700 aa9.07□□□□□ -0.96
EPHA4-206ENST00000424339 ZNF428Q96B54 188 aa9.07□□□□□ -0.96
EPHA4-206ENST00000424339 PRDM9Q9NQV7 894 aa9.07□□□□□ -0.96
EPHA4-206ENST00000424339 ATG3Q9NT62 314 aa9.07□□□□□ -0.96
EPHA4-206ENST00000424339 APBA3O96018 575 aa9.06□□□□□ -0.96
EPHA4-206ENST00000424339 SLFN5Q08AF3 891 aa9.06□□□□□ -0.96
EPHA4-206ENST00000424339 TRIM32Q13049 653 aa9.06□□□□□ -0.96
EPHA4-206ENST00000424339 MBIPQ9NS73 344 aa9.06□□□□□ -0.96
EPHA4-206ENST00000424339 NXF1Q9UBU9 619 aaKnown RBP9.06□□□□□ -0.96
EPHA4-206ENST00000424339 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-206ENST00000424339 ASAP1Q9ULH1 1129 aa9.06□□□□□ -0.96
EPHA4-206ENST00000424339 LAS1LQ9Y4W2 734 aaKnown RBP9.06□□□□□ -0.96
EPHA4-206ENST00000424339 EP400Q96L91 3159 aa9.06□□□□□ -0.96
EPHA4-206ENST00000424339 HEG1Q9ULI3 1381 aa9.06□□□□□ -0.96
EPHA4-206ENST00000424339 FANCIQ9NVI1 1328 aa9.05□□□□□ -0.96
EPHA4-206ENST00000424339 KCPQ6ZWJ8 1503 aa9.05□□□□□ -0.96
EPHA4-206ENST00000424339 LOC102724428A0A0B4J2F2 783 aa9.05□□□□□ -0.96
EPHA4-206ENST00000424339 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
EPHA4-206ENST00000424339 SNRPA1P09661 255 aaKnown RBP9.05□□□□□ -0.96
EPHA4-206ENST00000424339 GMPRP36959 345 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms