RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
CLCN3P1-201ENST00000423965 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
CLCN3P1-201ENST00000423965 C6orf132Q5T0Z8 1188 aa11.07□□□□□ -0.64
CLCN3P1-201ENST00000423965 STYK1Q6J9G0 422 aa11.07□□□□□ -0.64
CLCN3P1-201ENST00000423965 CTU1Q7Z7A3 348 aaKnown RBP11.07□□□□□ -0.64
CLCN3P1-201ENST00000423965 SOS1Q07889 1333 aaPredicted RBP11.07□□□□□ -0.64
CLCN3P1-201ENST00000423965 CABP4P57796 275 aa11.06□□□□□ -0.64
CLCN3P1-201ENST00000423965 AKAP4Q5JQC9 854 aa11.06□□□□□ -0.64
CLCN3P1-201ENST00000423965 PRPF40BQ6NWY9 871 aaKnown RBP11.06□□□□□ -0.64
CLCN3P1-201ENST00000423965 USP50Q70EL3 339 aaPredicted RBP11.06□□□□□ -0.64
CLCN3P1-201ENST00000423965 C7orf43Q8WVR3 580 aa11.06□□□□□ -0.64
CLCN3P1-201ENST00000423965 TRPM7Q96QT4 1865 aa11.06□□□□□ -0.64
CLCN3P1-201ENST00000423965 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 CARMIL3Q8ND23 1372 aa11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 TK2O00142 265 aa11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 TRAF5O00463 557 aa11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 FYB1O15117 783 aa11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 LMOD1P29536 600 aaPredicted RBP11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 FKBP4Q02790 459 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 CCDC93Q567U6 631 aa11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 BICDL1Q6ZP65 573 aa11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 SLC17A8Q8NDX2 589 aa11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
CLCN3P1-201ENST00000423965 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
CLCN3P1-201ENST00000423965 COL9A1P20849 921 aa11.04□□□□□ -0.64
CLCN3P1-201ENST00000423965 MASTLQ96GX5 879 aa11.04□□□□□ -0.64
CLCN3P1-201ENST00000423965 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
CLCN3P1-201ENST00000423965 SEMA3EO15041 775 aa11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 CELF2O95319 508 aaKnown RBP11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 SRGNP10124 158 aa11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 OSBPP22059 807 aa11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 RTKN2Q8IZC4 609 aa11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 EYA1Q99502 592 aa11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 ZNF277Q9NRM2 450 aaPredicted RBP11.03□□□□□ -0.64
CLCN3P1-201ENST00000423965 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
CLCN3P1-201ENST00000423965 VPS9D1Q9Y2B5 631 aa11.02□□□□□ -0.65
CLCN3P1-201ENST00000423965 SZT2Q5T011 3432 aa11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 SLX4Q8IY92 1834 aa11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 CYP19A1P11511 503 aaPredicted RBP11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 IARSP41252 1262 aaKnown RBP11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 EIF6P56537 245 aaKnown RBP11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 PRR5LQ6MZQ0 368 aa11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 JDP2Q8WYK2 163 aa11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 L3MBTL2Q969R5 705 aa11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 COL15A1P39059 1388 aa11.01□□□□□ -0.65
CLCN3P1-201ENST00000423965 EPS15P42566 896 aa11□□□□□ -0.65
CLCN3P1-201ENST00000423965 DNAJC10Q8IXB1 793 aa11□□□□□ -0.65
CLCN3P1-201ENST00000423965 NFATC2IPQ8NCF5 419 aa11□□□□□ -0.65
CLCN3P1-201ENST00000423965 ZIC5Q96T25 663 aa11□□□□□ -0.65
CLCN3P1-201ENST00000423965 SLC4A5Q9BY07 1137 aa11□□□□□ -0.65
CLCN3P1-201ENST00000423965 RNF186Q9NXI6 227 aa11□□□□□ -0.65
CLCN3P1-201ENST00000423965 WASHC2AQ641Q2 1341 aa11□□□□□ -0.65
CLCN3P1-201ENST00000423965 A0A087WZG4 1122 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 ST20-MTHFSA0A0A6YYL1 179 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 TRPA1O75762 1119 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 MTHFSP49914 203 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 SCNN1DP51172 638 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 PLEKHO1Q53GL0 409 aaPredicted RBP10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 PGAP2Q9UHJ9 254 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 GJA3Q9Y6H8 435 aa10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 MKI67P46013 3256 aaKnown RBP10.99□□□□□ -0.65
CLCN3P1-201ENST00000423965 ANKRD31Q8N7Z5 1873 aa10.98□□□□□ -0.65
CLCN3P1-201ENST00000423965 HRO43593 1189 aa10.98□□□□□ -0.65
CLCN3P1-201ENST00000423965 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
CLCN3P1-201ENST00000423965 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
CLCN3P1-201ENST00000423965 SYNE4Q8N205 404 aa10.98□□□□□ -0.65
CLCN3P1-201ENST00000423965 ADARB2Q9NS39 739 aaKnown RBP10.98□□□□□ -0.65
CLCN3P1-201ENST00000423965 EMILIN1Q9Y6C2 1016 aa10.98□□□□□ -0.65
CLCN3P1-201ENST00000423965 TRIOBPQ9H2D6 2365 aa10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 NPR1P16066 1061 aa10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 HUNKP57058 714 aa10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 ST5P78524 1137 aa10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 CNBD1Q8NA66 436 aa10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 ZC3H15Q8WU90 426 aaKnown RBP10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 ZBTB1Q9Y2K1 713 aa10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 PITPNM2Q9BZ72 1349 aa10.97□□□□□ -0.65
CLCN3P1-201ENST00000423965 FAM155AB1AL88 458 aaPredicted RBP10.96□□□□□ -0.65
CLCN3P1-201ENST00000423965 KIF23Q02241 960 aaPredicted RBP10.96□□□□□ -0.65
CLCN3P1-201ENST00000423965 RGMBQ6NW40 437 aa10.96□□□□□ -0.65
CLCN3P1-201ENST00000423965 CDC37L1Q7L3B6 337 aa10.96□□□□□ -0.65
CLCN3P1-201ENST00000423965 CCDC24Q8N4L8 307 aa10.96□□□□□ -0.65
CLCN3P1-201ENST00000423965 SETDB2Q96T68 719 aa10.96□□□□□ -0.65
CLCN3P1-201ENST00000423965 PSMD1Q99460 953 aa10.96□□□□□ -0.65
CLCN3P1-201ENST00000423965 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
CLCN3P1-201ENST00000423965 TJP1Q07157 1748 aa10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 KLRG2A4D1S0 409 aaPredicted RBP10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 NPHP1O15259 732 aa10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 PPM1GO15355 546 aaPredicted RBP10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 ZNF530Q6P9A1 599 aaPredicted RBP10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 FBXO46Q6PJ61 603 aaPredicted RBP10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 GLIS2Q9BZE0 524 aaPredicted RBP10.95□□□□□ -0.66
CLCN3P1-201ENST00000423965 ZNF408Q9H9D4 720 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms