RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 RAB11FIP4Q86YS3 637 aa11.98□□□□□ -0.49
SSPN-202ENST00000422622 CCDC87Q9NVE4 849 aa11.98□□□□□ -0.49
SSPN-202ENST00000422622 CCNL1Q9UK58 526 aaPredicted RBP11.98□□□□□ -0.49
SSPN-202ENST00000422622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.98□□□□□ -0.49
SSPN-202ENST00000422622 MRE11P49959 708 aa11.98□□□□□ -0.49
SSPN-202ENST00000422622 GREM2Q9H772 168 aa11.98□□□□□ -0.49
SSPN-202ENST00000422622 RNF20Q5VTR2 975 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 CREBRFQ8IUR6 639 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 CAMTA1Q9Y6Y1 1673 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 IGHMBP2P38935 993 aaKnown RBP11.97□□□□□ -0.49
SSPN-202ENST00000422622 RRP12Q5JTH9 1297 aaKnown RBP11.97□□□□□ -0.49
SSPN-202ENST00000422622 PTPN12Q05209 780 aaKnown RBP11.97□□□□□ -0.49
SSPN-202ENST00000422622 PI16Q6UXB8 463 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 ZNF771Q7L3S4 317 aaPredicted RBP11.97□□□□□ -0.49
SSPN-202ENST00000422622 CHAMP1Q96JM3 812 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
SSPN-202ENST00000422622 DBNLQ9UJU6 430 aaKnown RBP11.97□□□□□ -0.49
SSPN-202ENST00000422622 NCAPD2Q15021 1401 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 HSPA1LP34931 641 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 CHST3Q7LGC8 479 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 KAZALD1Q96I82 304 aa11.97□□□□□ -0.49
SSPN-202ENST00000422622 EYA2O00167 538 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 RFC4P35249 363 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 POLA2Q14181 598 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 ATP2B3Q16720 1220 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 CAVIN1Q6NZI2 390 aaKnown RBP11.96□□□□□ -0.49
SSPN-202ENST00000422622 PTF1AQ7RTS3 328 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.49
SSPN-202ENST00000422622 AK7Q96M32 723 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 SMC3Q9UQE7 1217 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 TOPAZ1Q8N9V7 1692 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 CPDO75976 1380 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 NECAB1Q8N987 351 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 MTMR7Q9Y216 660 aa11.96□□□□□ -0.49
SSPN-202ENST00000422622 COL5A2P05997 1499 aaPredicted RBP11.96□□□□□ -0.5
SSPN-202ENST00000422622 ADORA1P30542 326 aa11.96□□□□□ -0.5
SSPN-202ENST00000422622 IL15P40933 162 aaPredicted RBP11.96□□□□□ -0.5
SSPN-202ENST00000422622 CCAR2Q8N163 923 aaKnown RBP11.96□□□□□ -0.5
SSPN-202ENST00000422622 RBM8AQ9Y5S9 174 aaKnown RBP11.96□□□□□ -0.5
SSPN-202ENST00000422622 CYP46A1Q9Y6A2 500 aa11.96□□□□□ -0.5
SSPN-202ENST00000422622 LTN1O94822 1766 aa11.96□□□□□ -0.5
SSPN-202ENST00000422622 UTP14AQ9BVJ6 771 aaKnown RBP11.95□□□□□ -0.5
SSPN-202ENST00000422622 SEC31BQ9NQW1 1179 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 PDRG1Q9NUG6 133 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
SSPN-202ENST00000422622 ZNF652Q9Y2D9 606 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
SSPN-202ENST00000422622 PTH1RQ03431 593 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 IL25Q9H293 177 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 GDPD2Q9HCC8 539 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 RBM25P49756 843 aaKnown RBP11.95□□□□□ -0.5
SSPN-202ENST00000422622 FERMT3Q86UX7 667 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 A0A0D9SFI3 127 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
SSPN-202ENST00000422622 MAP3K15Q6ZN16 1313 aa11.94□□□□□ -0.5
SSPN-202ENST00000422622 BLOC1S2Q6QNY1 142 aa11.94□□□□□ -0.5
SSPN-202ENST00000422622 GIGYF2Q6Y7W6 1299 aaKnown RBP11.94□□□□□ -0.5
SSPN-202ENST00000422622 TNPO1Q92973 898 aaKnown RBP11.94□□□□□ -0.5
SSPN-202ENST00000422622 QTRT2Q9H974 415 aaKnown RBP11.94□□□□□ -0.5
SSPN-202ENST00000422622 LRP2BPQ9P2M1 347 aa11.94□□□□□ -0.5
SSPN-202ENST00000422622 ISY1Q9ULR0 285 aaKnown RBP11.94□□□□□ -0.5
SSPN-202ENST00000422622 PRPF40AO75400 957 aaKnown RBP11.94□□□□□ -0.5
SSPN-202ENST00000422622 PI4K2BQ8TCG2 481 aa11.94□□□□□ -0.5
SSPN-202ENST00000422622 TMX3Q96JJ7 454 aa11.94□□□□□ -0.5
SSPN-202ENST00000422622 CYP19A1P11511 503 aaPredicted RBP11.94□□□□□ -0.5
SSPN-202ENST00000422622 SETDB2Q96T68 719 aa11.94□□□□□ -0.5
SSPN-202ENST00000422622 PAG1Q9NWQ8 432 aa11.94□□□□□ -0.5
SSPN-202ENST00000422622 G3V3G9 751 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 ANTXR1Q9H6X2 564 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 RAI14Q9P0K7 980 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 AKAP2Q9Y2D5 859 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 OVOS2A0A0G2JMS6 1433 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 SPATA31A1Q5TZJ5 1347 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 SH3TC1Q8TE82 1336 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 HIP1O00291 1037 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 TRIM37O94972 964 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 NLRP10Q86W26 655 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
SSPN-202ENST00000422622 XAGE2Q96GT9 111 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 CDCA7Q9BWT1 371 aaPredicted RBP11.93□□□□□ -0.5
SSPN-202ENST00000422622 RTCBQ9Y3I0 505 aaKnown RBP11.93□□□□□ -0.5
SSPN-202ENST00000422622 TTC41PQ6P2S7 1318 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 MCM4P33991 863 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 USPL1Q5W0Q7 1092 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 NCOA3Q9Y6Q9 1424 aa11.93□□□□□ -0.5
SSPN-202ENST00000422622 SGSM2O43147 1006 aa11.92□□□□□ -0.5
SSPN-202ENST00000422622 NWD1Q149M9 1564 aa11.92□□□□□ -0.5
SSPN-202ENST00000422622 CEBPZQ03701 1054 aaKnown RBP11.92□□□□□ -0.5
SSPN-202ENST00000422622 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
SSPN-202ENST00000422622 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
SSPN-202ENST00000422622 FAM184AQ8NB25 1140 aa11.92□□□□□ -0.5
SSPN-202ENST00000422622 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
SSPN-202ENST00000422622 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
SSPN-202ENST00000422622 PKP1Q13835 747 aa11.92□□□□□ -0.5
SSPN-202ENST00000422622 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
SSPN-202ENST00000422622 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
SSPN-202ENST00000422622 PPP1R1BQ9UD71 204 aaPredicted RBP11.92□□□□□ -0.5
SSPN-202ENST00000422622 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms