RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GRIPAP1Q4V328 841 aa28.07■■■□□ 2.08
TRAF4-204ENST00000422344 RTL5Q5HYW3 569 aaPredicted RBP28.07■■■□□ 2.08
TRAF4-204ENST00000422344 KSR2Q6VAB6 950 aa28.07■■■□□ 2.08
TRAF4-204ENST00000422344 SPINK5Q9NQ38 1064 aaPredicted RBP28.07■■■□□ 2.08
TRAF4-204ENST00000422344 ABCC4O15439 1325 aa28.07■■■□□ 2.08
TRAF4-204ENST00000422344 LAMB2P55268 1798 aa28.06■■■□□ 2.08
TRAF4-204ENST00000422344 CCDC191Q8NCU4 936 aa28.06■■■□□ 2.08
TRAF4-204ENST00000422344 HACL1Q9UJ83 578 aa28.06■■■□□ 2.08
TRAF4-204ENST00000422344 CLEC11AQ9Y240 323 aa28.06■■■□□ 2.08
TRAF4-204ENST00000422344 PI4KAP2A4QPH2 592 aa28.05■■■□□ 2.08
TRAF4-204ENST00000422344 VAMP4O75379 141 aa28.05■■■□□ 2.08
TRAF4-204ENST00000422344 HSP90B1P14625 803 aaKnown RBP28.05■■■□□ 2.08
TRAF4-204ENST00000422344 IARSP41252 1262 aaKnown RBP28.05■■■□□ 2.08
TRAF4-204ENST00000422344 CNTNAP1P78357 1384 aa28.05■■■□□ 2.08
TRAF4-204ENST00000422344 NEXNQ0ZGT2 675 aa28.05■■■□□ 2.08
TRAF4-204ENST00000422344 PI4KAP1Q8N8J0 262 aa28.05■■■□□ 2.08
TRAF4-204ENST00000422344 ZBTB38Q8NAP3 1195 aaPredicted RBP28.05■■■□□ 2.08
TRAF4-204ENST00000422344 CWC25Q9NXE8 425 aaPredicted RBP28.05■■■□□ 2.08
TRAF4-204ENST00000422344 IRS4O14654 1257 aaPredicted RBP28.04■■■□□ 2.08
TRAF4-204ENST00000422344 PSMD1Q99460 953 aa28.04■■■□□ 2.08
TRAF4-204ENST00000422344 DDX60Q8IY21 1712 aaKnown RBP28.04■■■□□ 2.08
TRAF4-204ENST00000422344 BBOX1O75936 387 aa28.03■■■□□ 2.08
TRAF4-204ENST00000422344 ITGBL1O95965 494 aaPredicted RBP28.03■■■□□ 2.08
TRAF4-204ENST00000422344 EPHX2P34913 555 aa28.03■■■□□ 2.08
TRAF4-204ENST00000422344 G2E3Q7L622 706 aa28.02■■■□□ 2.08
TRAF4-204ENST00000422344 ATP6V0A2Q9Y487 856 aa28.02■■■□□ 2.08
TRAF4-204ENST00000422344 ZNF521Q96K83 1311 aa28.01■■■□□ 2.07
TRAF4-204ENST00000422344 TMEM88BA6NKF7 163 aa28.01■■■□□ 2.07
TRAF4-204ENST00000422344 FZD9O00144 591 aa28.01■■■□□ 2.07
TRAF4-204ENST00000422344 FLIIQ13045 1269 aa28.01■■■□□ 2.07
TRAF4-204ENST00000422344 GRAPQ13588 217 aa28.01■■■□□ 2.07
TRAF4-204ENST00000422344 GRAPLQ8TC17 118 aaPredicted RBP28.01■■■□□ 2.07
TRAF4-204ENST00000422344 PCCAP05165 728 aaPredicted RBP28■■■□□ 2.07
TRAF4-204ENST00000422344 FKBP5Q13451 457 aaPredicted RBP28■■■□□ 2.07
TRAF4-204ENST00000422344 SF3B3Q15393 1217 aaKnown RBP28■■■□□ 2.07
TRAF4-204ENST00000422344 SNED1Q8TER0 1413 aa28■■■□□ 2.07
TRAF4-204ENST00000422344 FOXN1O15353 648 aa27.99■■■□□ 2.07
TRAF4-204ENST00000422344 VEGFBP49765 207 aa27.98■■■□□ 2.07
TRAF4-204ENST00000422344 TMC4Q7Z404 712 aa27.98■■■□□ 2.07
TRAF4-204ENST00000422344 PNMA8AQ86V59 439 aaPredicted RBP27.98■■■□□ 2.07
TRAF4-204ENST00000422344 JDP2Q8WYK2 163 aa27.98■■■□□ 2.07
TRAF4-204ENST00000422344 ADAMTSL1Q8N6G6 1762 aa27.97■■■□□ 2.07
TRAF4-204ENST00000422344 SP8Q8IXZ3 490 aa27.97■■■□□ 2.07
TRAF4-204ENST00000422344 GPC2Q8N158 579 aa27.97■■■□□ 2.07
TRAF4-204ENST00000422344 MAP1SQ66K74 1059 aaPredicted RBP27.96■■■□□ 2.07
TRAF4-204ENST00000422344 CNTROBQ8N137 903 aa27.96■■■□□ 2.07
TRAF4-204ENST00000422344 CACNA1FO60840 1977 aa27.96■■■□□ 2.07
TRAF4-204ENST00000422344 E9PSI1 815 aa27.95■■■□□ 2.06
TRAF4-204ENST00000422344 IGKV5-2P06315 115 aa27.95■■■□□ 2.06
TRAF4-204ENST00000422344 DPP8Q6V1X1 898 aaPredicted RBP27.95■■■□□ 2.06
TRAF4-204ENST00000422344 SLC51AQ86UW1 340 aa27.95■■■□□ 2.06
TRAF4-204ENST00000422344 LARGE2Q8N3Y3 721 aa27.95■■■□□ 2.06
TRAF4-204ENST00000422344 SUPT20HQ8NEM7 779 aa27.95■■■□□ 2.06
TRAF4-204ENST00000422344 JARID2Q92833 1246 aaPredicted RBP27.95■■■□□ 2.06
TRAF4-204ENST00000422344 GJA3Q9Y6H8 435 aa27.95■■■□□ 2.06
TRAF4-204ENST00000422344 EIF6P56537 245 aaKnown RBP27.94■■■□□ 2.06
TRAF4-204ENST00000422344 CWF19L2Q2TBE0 894 aaKnown RBP27.94■■■□□ 2.06
TRAF4-204ENST00000422344 DIEXFQ68CQ4 756 aaKnown RBP27.94■■■□□ 2.06
TRAF4-204ENST00000422344 MPNDQ8N594 471 aa27.94■■■□□ 2.06
TRAF4-204ENST00000422344 DNAAF4Q8WXU2 420 aa27.94■■■□□ 2.06
TRAF4-204ENST00000422344 NEURL1BA8MQ27 555 aa27.93■■■□□ 2.06
TRAF4-204ENST00000422344 PDE8AO60658 829 aa27.93■■■□□ 2.06
TRAF4-204ENST00000422344 CCDC152Q4G0S7 254 aa27.93■■■□□ 2.06
TRAF4-204ENST00000422344 AIDAQ96BJ3 306 aa27.93■■■□□ 2.06
TRAF4-204ENST00000422344 CDHR2Q9BYE9 1310 aa27.92■■■□□ 2.06
TRAF4-204ENST00000422344 COL4A5P29400 1685 aa27.92■■■□□ 2.06
TRAF4-204ENST00000422344 CELF1Q92879 486 aaKnown RBP27.92■■■□□ 2.06
TRAF4-204ENST00000422344 PPIP5K2O43314 1243 aa27.91■■■□□ 2.06
TRAF4-204ENST00000422344 TAF1P21675 1872 aa27.91■■■□□ 2.06
TRAF4-204ENST00000422344 CTCFP49711 727 aaPredicted RBP27.9■■■□□ 2.06
TRAF4-204ENST00000422344 NIM1KQ8IY84 436 aa27.9■■■□□ 2.06
TRAF4-204ENST00000422344 VPS33BQ9H267 617 aa27.9■■■□□ 2.06
TRAF4-204ENST00000422344 PRDM10Q9NQV6 1147 aa27.9■■■□□ 2.06
TRAF4-204ENST00000422344 LMOD1P29536 600 aaPredicted RBP27.89■■■□□ 2.06
TRAF4-204ENST00000422344 DEFB115Q30KQ5 88 aa27.89■■■□□ 2.06
TRAF4-204ENST00000422344 LINS1Q8NG48 757 aa27.89■■■□□ 2.06
TRAF4-204ENST00000422344 RTFDC1Q9BY42 306 aaPredicted RBP27.89■■■□□ 2.06
TRAF4-204ENST00000422344 RPS8P62241 208 aaKnown RBP27.88■■■□□ 2.05
TRAF4-204ENST00000422344 SLFN5Q08AF3 891 aa27.88■■■□□ 2.05
TRAF4-204ENST00000422344 AOC3Q16853 763 aa27.88■■■□□ 2.05
TRAF4-204ENST00000422344 UBE3BQ7Z3V4 1068 aa27.88■■■□□ 2.05
TRAF4-204ENST00000422344 CCDC85AQ96PX6 553 aaPredicted RBP27.88■■■□□ 2.05
TRAF4-204ENST00000422344 WBP1LQ9NX94 342 aa27.88■■■□□ 2.05
TRAF4-204ENST00000422344 RASSF10A6NK89 507 aa27.87■■■□□ 2.05
TRAF4-204ENST00000422344 GCKRQ14397 625 aa27.87■■■□□ 2.05
TRAF4-204ENST00000422344 ABT1Q9ULW3 272 aaKnown RBP27.87■■■□□ 2.05
TRAF4-204ENST00000422344 LRRC37AA6NMS7 1700 aa27.87■■■□□ 2.05
TRAF4-204ENST00000422344 LTBP1Q14766 1721 aa27.87■■■□□ 2.05
TRAF4-204ENST00000422344 CTSWP56202 376 aa27.86■■■□□ 2.05
TRAF4-204ENST00000422344 SEC31BQ9NQW1 1179 aa27.86■■■□□ 2.05
TRAF4-204ENST00000422344 NSFL1CQ9UNZ2 370 aaKnown RBP27.86■■■□□ 2.05
TRAF4-204ENST00000422344 F6X3S4 739 aa27.85■■■□□ 2.05
TRAF4-204ENST00000422344 H7C1W4 665 aa27.85■■■□□ 2.05
TRAF4-204ENST00000422344 EPS15P42566 896 aa27.85■■■□□ 2.05
TRAF4-204ENST00000422344 SCNN1DP51172 638 aa27.85■■■□□ 2.05
TRAF4-204ENST00000422344 LBX1P52954 281 aa27.84■■■□□ 2.05
TRAF4-204ENST00000422344 MIER1Q8N108 512 aa27.83■■■□□ 2.05
TRAF4-204ENST00000422344 CDCA7LQ96GN5 454 aa27.83■■■□□ 2.05
TRAF4-204ENST00000422344 WDR33Q9C0J8 1336 aaKnown RBP27.83■■■□□ 2.05
TRAF4-204ENST00000422344 FMR1Q06787 632 aaKnown RBP eCLIP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms