RNA–Protein interactions for RNA: ENST00000421687.6

PABPC4-205, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 1,663 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-205ENST00000421687 MTX1Q13505 466 aa17.55■□□□□ 0.4
PABPC4-205ENST00000421687 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
PABPC4-205ENST00000421687 CEP85Q6P2H3 762 aa17.54■□□□□ 0.4
PABPC4-205ENST00000421687 CD2APQ9Y5K6 639 aa17.54■□□□□ 0.4
PABPC4-205ENST00000421687 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
PABPC4-205ENST00000421687 CHMP3Q9Y3E7 222 aa17.53■□□□□ 0.4
PABPC4-205ENST00000421687 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
PABPC4-205ENST00000421687 ATP8B2P98198 1209 aa17.52■□□□□ 0.4
PABPC4-205ENST00000421687 ERICH6BQ5W0A0 696 aa17.52■□□□□ 0.4
PABPC4-205ENST00000421687 RPGRQ92834 1020 aaKnown RBP17.52■□□□□ 0.4
PABPC4-205ENST00000421687 GREM2Q9H772 168 aa17.52■□□□□ 0.4
PABPC4-205ENST00000421687 H0YIN7 160 aa17.52■□□□□ 0.39
PABPC4-205ENST00000421687 SRGAP3O43295 1099 aa17.52■□□□□ 0.39
PABPC4-205ENST00000421687 SRGNP10124 158 aa17.52■□□□□ 0.39
PABPC4-205ENST00000421687 TGFB2P61812 414 aa17.52■□□□□ 0.39
PABPC4-205ENST00000421687 FAM161AQ3B820 660 aa17.52■□□□□ 0.39
PABPC4-205ENST00000421687 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.39
PABPC4-205ENST00000421687 PCDHB15Q9Y5E8 787 aa17.52■□□□□ 0.39
PABPC4-205ENST00000421687 ITGA6P23229 1130 aa17.51■□□□□ 0.39
PABPC4-205ENST00000421687 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
PABPC4-205ENST00000421687 IFIT5Q13325 482 aaKnown RBP17.51■□□□□ 0.39
PABPC4-205ENST00000421687 CCDC57Q2TAC2 916 aa17.51■□□□□ 0.39
PABPC4-205ENST00000421687 DDX46Q7L014 1031 aaKnown RBP17.51■□□□□ 0.39
PABPC4-205ENST00000421687 C2CD5Q86YS7 1000 aa17.51■□□□□ 0.39
PABPC4-205ENST00000421687 PPP1R1BQ9UD71 204 aaPredicted RBP17.51■□□□□ 0.39
PABPC4-205ENST00000421687 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
PABPC4-205ENST00000421687 NPR1P16066 1061 aa17.5■□□□□ 0.39
PABPC4-205ENST00000421687 MASTLQ96GX5 879 aa17.5■□□□□ 0.39
PABPC4-205ENST00000421687 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
PABPC4-205ENST00000421687 ANKRD18BA2A2Z9 1011 aa17.49■□□□□ 0.39
PABPC4-205ENST00000421687 HMMRO75330 724 aa17.49■□□□□ 0.39
PABPC4-205ENST00000421687 POLA2Q14181 598 aa17.49■□□□□ 0.39
PABPC4-205ENST00000421687 SIRT2Q8IXJ6 389 aa17.49■□□□□ 0.39
PABPC4-205ENST00000421687 KLHL34Q8N239 644 aa17.49■□□□□ 0.39
PABPC4-205ENST00000421687 SSH3Q8TE77 659 aa17.49■□□□□ 0.39
PABPC4-205ENST00000421687 CHRNA5P30532 468 aa17.48■□□□□ 0.39
PABPC4-205ENST00000421687 STYK1Q6J9G0 422 aa17.48■□□□□ 0.39
PABPC4-205ENST00000421687 CRAMP1Q96RY5 1269 aa17.48■□□□□ 0.39
PABPC4-205ENST00000421687 CDC5LQ99459 802 aaKnown RBP17.48■□□□□ 0.39
PABPC4-205ENST00000421687 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
PABPC4-205ENST00000421687 ALDH1B1P30837 517 aa17.48■□□□□ 0.39
PABPC4-205ENST00000421687 RFX5P48382 616 aaPredicted RBP17.48■□□□□ 0.39
PABPC4-205ENST00000421687 LRP5O75197 1615 aa17.48■□□□□ 0.39
PABPC4-205ENST00000421687 COL11A2P13942 1736 aaPredicted RBP17.48■□□□□ 0.39
PABPC4-205ENST00000421687 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
PABPC4-205ENST00000421687 DPEP1P16444 411 aa17.47■□□□□ 0.39
PABPC4-205ENST00000421687 GRAPQ13588 217 aa17.47■□□□□ 0.39
PABPC4-205ENST00000421687 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
PABPC4-205ENST00000421687 FHDC1Q9C0D6 1143 aaPredicted RBP17.47■□□□□ 0.39
PABPC4-205ENST00000421687 KCNA3P22001 575 aa17.46■□□□□ 0.39
PABPC4-205ENST00000421687 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
PABPC4-205ENST00000421687 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
PABPC4-205ENST00000421687 CNKSR1Q969H4 720 aa17.46■□□□□ 0.39
PABPC4-205ENST00000421687 ZNF622Q969S3 477 aaKnown RBP eCLIP17.46■□□□□ 0.39
PABPC4-205ENST00000421687 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
PABPC4-205ENST00000421687 RPS8P62241 208 aaKnown RBP17.45■□□□□ 0.38
PABPC4-205ENST00000421687 PTPN12Q05209 780 aaKnown RBP17.45■□□□□ 0.38
PABPC4-205ENST00000421687 HDAC1Q13547 482 aaPredicted RBP17.45■□□□□ 0.38
PABPC4-205ENST00000421687 CELF1Q92879 486 aaKnown RBP17.45■□□□□ 0.38
PABPC4-205ENST00000421687 COPRSQ9NQ92 184 aa17.45■□□□□ 0.38
PABPC4-205ENST00000421687 DLEC1Q9Y238 1755 aa17.45■□□□□ 0.38
PABPC4-205ENST00000421687 BBOX1O75936 387 aa17.45■□□□□ 0.38
PABPC4-205ENST00000421687 IGHMBP2P38935 993 aaKnown RBP17.45■□□□□ 0.38
PABPC4-205ENST00000421687 RWDD1Q9H446 243 aaPredicted RBP17.45■□□□□ 0.38
PABPC4-205ENST00000421687 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
PABPC4-205ENST00000421687 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
PABPC4-205ENST00000421687 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
PABPC4-205ENST00000421687 SYT17Q9BSW7 474 aa17.44■□□□□ 0.38
PABPC4-205ENST00000421687 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
PABPC4-205ENST00000421687 LDHAL6AQ6ZMR3 332 aa17.43■□□□□ 0.38
PABPC4-205ENST00000421687 TMC4Q7Z404 712 aa17.43■□□□□ 0.38
PABPC4-205ENST00000421687 TTLL6Q8N841 843 aa17.43■□□□□ 0.38
PABPC4-205ENST00000421687 NLGN2Q8NFZ4 835 aa17.43■□□□□ 0.38
PABPC4-205ENST00000421687 BSDC1Q9NW68 430 aaPredicted RBP17.43■□□□□ 0.38
PABPC4-205ENST00000421687 PIM2Q9P1W9 311 aa17.43■□□□□ 0.38
PABPC4-205ENST00000421687 PA2G4Q9UQ80 394 aaKnown RBP17.43■□□□□ 0.38
PABPC4-205ENST00000421687 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
PABPC4-205ENST00000421687 COL4A1P02462 1669 aa17.42■□□□□ 0.38
PABPC4-205ENST00000421687 TAF1P21675 1872 aa17.42■□□□□ 0.38
PABPC4-205ENST00000421687 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
PABPC4-205ENST00000421687 EYA2O00167 538 aa17.42■□□□□ 0.38
PABPC4-205ENST00000421687 SURF6O75683 361 aaKnown RBP17.42■□□□□ 0.38
PABPC4-205ENST00000421687 CIAO1O76071 339 aa17.42■□□□□ 0.38
PABPC4-205ENST00000421687 PRPF40BQ6NWY9 871 aaKnown RBP17.42■□□□□ 0.38
PABPC4-205ENST00000421687 SIL1Q9H173 461 aa17.42■□□□□ 0.38
PABPC4-205ENST00000421687 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
PABPC4-205ENST00000421687 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
PABPC4-205ENST00000421687 DCTPP1Q9H773 170 aa17.41■□□□□ 0.38
PABPC4-205ENST00000421687 CNNM1Q9NRU3 951 aa17.41■□□□□ 0.38
PABPC4-205ENST00000421687 PPP4R2Q9NY27 417 aa17.41■□□□□ 0.38
PABPC4-205ENST00000421687 IGHDP01880 384 aa17.4■□□□□ 0.38
PABPC4-205ENST00000421687 G3BP1Q13283 466 aaKnown RBP eCLIP17.4■□□□□ 0.384e-7■□□□□ 10.4
PABPC4-205ENST00000421687 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
PABPC4-205ENST00000421687 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
PABPC4-205ENST00000421687 IL15P40933 162 aaPredicted RBP17.39■□□□□ 0.37
PABPC4-205ENST00000421687 LRRC24Q50LG9 513 aa17.39■□□□□ 0.37
PABPC4-205ENST00000421687 DALRD3Q5D0E6 543 aaKnown RBP17.39■□□□□ 0.37
PABPC4-205ENST00000421687 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
PABPC4-205ENST00000421687 EXOC6BQ9Y2D4 811 aa17.39■□□□□ 0.37
PABPC4-205ENST00000421687 ATP6V0A2Q9Y487 856 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms