RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 SURF6O75683 361 aaKnown RBP26.72■■□□□ 1.87
ABCF3-202ENST00000421340 ST5P78524 1137 aa26.72■■□□□ 1.87
ABCF3-202ENST00000421340 PTPN12Q05209 780 aaKnown RBP26.72■■□□□ 1.87
ABCF3-202ENST00000421340 FBXO3Q9UK99 471 aa26.72■■□□□ 1.87
ABCF3-202ENST00000421340 NPHP1O15259 732 aa26.71■■□□□ 1.87
ABCF3-202ENST00000421340 MMP10P09238 476 aa26.71■■□□□ 1.87
ABCF3-202ENST00000421340 NUCB1Q02818 461 aa26.71■■□□□ 1.87
ABCF3-202ENST00000421340 IFIT5Q13325 482 aaKnown RBP26.71■■□□□ 1.87
ABCF3-202ENST00000421340 CHMP3Q9Y3E7 222 aa26.71■■□□□ 1.87
ABCF3-202ENST00000421340 ABCC12Q96J65 1359 aa26.7■■□□□ 1.86
ABCF3-202ENST00000421340 ANKRD18BA2A2Z9 1011 aa26.69■■□□□ 1.86
ABCF3-202ENST00000421340 ERC1Q8IUD2 1116 aa26.69■■□□□ 1.86
ABCF3-202ENST00000421340 GREM2Q9H772 168 aa26.69■■□□□ 1.86
ABCF3-202ENST00000421340 ITGA6P23229 1130 aa26.68■■□□□ 1.86
ABCF3-202ENST00000421340 G3BP1Q13283 466 aaKnown RBP eCLIP26.68■■□□□ 1.86
ABCF3-202ENST00000421340 FAM161AQ3B820 660 aa26.68■■□□□ 1.86
ABCF3-202ENST00000421340 PDZRN3Q9UPQ7 1066 aa26.68■■□□□ 1.86
ABCF3-202ENST00000421340 EXOC6BQ9Y2D4 811 aa26.68■■□□□ 1.86
ABCF3-202ENST00000421340 LAMB2P55268 1798 aa26.68■■□□□ 1.86
ABCF3-202ENST00000421340 KLRG2A4D1S0 409 aaPredicted RBP26.67■■□□□ 1.86
ABCF3-202ENST00000421340 CIAO1O76071 339 aa26.67■■□□□ 1.86
ABCF3-202ENST00000421340 ANKRD45Q5TZF3 282 aa26.67■■□□□ 1.86
ABCF3-202ENST00000421340 MSL1Q68DK7 614 aa26.67■■□□□ 1.86
ABCF3-202ENST00000421340 CHD1LQ86WJ1 897 aa26.67■■□□□ 1.86
ABCF3-202ENST00000421340 PDGFDQ9GZP0 370 aaPredicted RBP26.67■■□□□ 1.86
ABCF3-202ENST00000421340 PA2G4Q9UQ80 394 aaKnown RBP26.67■■□□□ 1.86
ABCF3-202ENST00000421340 DDX60Q8IY21 1712 aaKnown RBP26.66■■□□□ 1.86
ABCF3-202ENST00000421340 KIF1BPQ96EK5 621 aa26.66■■□□□ 1.86
ABCF3-202ENST00000421340 BRIP1Q9BX63 1249 aa26.66■■□□□ 1.86
ABCF3-202ENST00000421340 LRRCC1Q9C099 1032 aa26.66■■□□□ 1.86
ABCF3-202ENST00000421340 ZBTB47Q9UFB7 747 aaPredicted RBP26.65■■□□□ 1.86
ABCF3-202ENST00000421340 NRXN2Q9P2S2 1712 aa26.65■■□□□ 1.86
ABCF3-202ENST00000421340 EYA2O00167 538 aa26.64■■□□□ 1.86
ABCF3-202ENST00000421340 R3HDM1Q15032 1099 aaKnown RBP26.64■■□□□ 1.86
ABCF3-202ENST00000421340 CRY2Q49AN0 593 aa26.64■■□□□ 1.86
ABCF3-202ENST00000421340 C3orf67Q6ZVT6 689 aa26.64■■□□□ 1.86
ABCF3-202ENST00000421340 RHPN1Q8TCX5 695 aa26.64■■□□□ 1.86
ABCF3-202ENST00000421340 IL15P40933 162 aaPredicted RBP26.63■■□□□ 1.85
ABCF3-202ENST00000421340 KLHDC4Q8TBB5 520 aa26.63■■□□□ 1.85
ABCF3-202ENST00000421340 CCDC85AQ96PX6 553 aaPredicted RBP26.63■■□□□ 1.85
ABCF3-202ENST00000421340 CDC5LQ99459 802 aaKnown RBP26.63■■□□□ 1.85
ABCF3-202ENST00000421340 MTFR1LQ9H019 292 aa26.63■■□□□ 1.85
ABCF3-202ENST00000421340 OS9Q13438 667 aaPredicted RBP26.62■■□□□ 1.85
ABCF3-202ENST00000421340 TAF7LQ5H9L4 462 aa26.62■■□□□ 1.85
ABCF3-202ENST00000421340 PDE6BP35913 854 aa26.61■■□□□ 1.85
ABCF3-202ENST00000421340 ATG9AQ7Z3C6 839 aa26.61■■□□□ 1.85
ABCF3-202ENST00000421340 CCDC24Q8N4L8 307 aa26.61■■□□□ 1.85
ABCF3-202ENST00000421340 ZNF594Q96JF6 807 aaPredicted RBP26.6■■□□□ 1.85
ABCF3-202ENST00000421340 SIL1Q9H173 461 aa26.6■■□□□ 1.85
ABCF3-202ENST00000421340 SEC31BQ9NQW1 1179 aa26.6■■□□□ 1.85
ABCF3-202ENST00000421340 MYH3P11055 1940 aa26.6■■□□□ 1.85
ABCF3-202ENST00000421340 SASH1O94885 1247 aa26.59■■□□□ 1.85
ABCF3-202ENST00000421340 HOXA10P31260 410 aaPredicted RBP26.59■■□□□ 1.85
ABCF3-202ENST00000421340 IGHMBP2P38935 993 aaKnown RBP26.59■■□□□ 1.85
ABCF3-202ENST00000421340 LDHAL6AQ6ZMR3 332 aa26.59■■□□□ 1.85
ABCF3-202ENST00000421340 DDX46Q7L014 1031 aaKnown RBP26.59■■□□□ 1.85
ABCF3-202ENST00000421340 RIPOR2Q9Y4F9 1068 aa26.59■■□□□ 1.85
ABCF3-202ENST00000421340 LNPKQ9C0E8 428 aa26.58■■□□□ 1.85
ABCF3-202ENST00000421340 CASZ1Q86V15 1759 aa26.58■■□□□ 1.85
ABCF3-202ENST00000421340 ANKRD18AQ8IVF6 992 aa26.57■■□□□ 1.84
ABCF3-202ENST00000421340 RBM17Q96I25 401 aaKnown RBP26.57■■□□□ 1.84
ABCF3-202ENST00000421340 GPR108Q9NPR9 543 aa26.57■■□□□ 1.84
ABCF3-202ENST00000421340 APBB1O00213 710 aa26.56■■□□□ 1.84
ABCF3-202ENST00000421340 RPS8P62241 208 aaKnown RBP26.56■■□□□ 1.84
ABCF3-202ENST00000421340 LRRC24Q50LG9 513 aa26.56■■□□□ 1.84
ABCF3-202ENST00000421340 CRAMP1Q96RY5 1269 aa26.56■■□□□ 1.84
ABCF3-202ENST00000421340 MPHOSPH8Q99549 860 aa26.56■■□□□ 1.84
ABCF3-202ENST00000421340 PUS3Q9BZE2 481 aaKnown RBP26.56■■□□□ 1.84
ABCF3-202ENST00000421340 BSDC1Q9NW68 430 aaPredicted RBP26.56■■□□□ 1.84
ABCF3-202ENST00000421340 SMARCA5O60264 1052 aaPredicted RBP26.55■■□□□ 1.84
ABCF3-202ENST00000421340 POLD1P28340 1107 aa26.55■■□□□ 1.84
ABCF3-202ENST00000421340 CLASRPQ8N2M8 674 aaKnown RBP26.55■■□□□ 1.84
ABCF3-202ENST00000421340 RPGRQ92834 1020 aaKnown RBP26.55■■□□□ 1.84
ABCF3-202ENST00000421340 CNNM1Q9NRU3 951 aa26.55■■□□□ 1.84
ABCF3-202ENST00000421340 ZBTB7AO95365 584 aa26.54■■□□□ 1.84
ABCF3-202ENST00000421340 PDE4AP27815 886 aa26.54■■□□□ 1.84
ABCF3-202ENST00000421340 CEP126Q9P2H0 1117 aa26.54■■□□□ 1.84
ABCF3-202ENST00000421340 MROH5Q6ZUA9 1318 aa26.54■■□□□ 1.84
ABCF3-202ENST00000421340 NPR1P16066 1061 aa26.53■■□□□ 1.84
ABCF3-202ENST00000421340 TFCP2Q12800 502 aa26.53■■□□□ 1.84
ABCF3-202ENST00000421340 GRAPQ13588 217 aa26.53■■□□□ 1.84
ABCF3-202ENST00000421340 GRAPLQ8TC17 118 aaPredicted RBP26.53■■□□□ 1.84
ABCF3-202ENST00000421340 TNRC6CQ9HCJ0 1690 aaKnown RBP26.53■■□□□ 1.84
ABCF3-202ENST00000421340 LRP5O75197 1615 aa26.52■■□□□ 1.84
ABCF3-202ENST00000421340 BBOX1O75936 387 aa26.52■■□□□ 1.84
ABCF3-202ENST00000421340 SRGNP10124 158 aa26.52■■□□□ 1.84
ABCF3-202ENST00000421340 CELF1Q92879 486 aaKnown RBP26.52■■□□□ 1.84
ABCF3-202ENST00000421340 IL1RAPL2Q9NP60 686 aa26.52■■□□□ 1.84
ABCF3-202ENST00000421340 AKAP2Q9Y2D5 859 aa26.51■■□□□ 1.83
ABCF3-202ENST00000421340 PSDA5PKW4 1024 aaPredicted RBP26.5■■□□□ 1.83
ABCF3-202ENST00000421340 TMC4Q7Z404 712 aa26.5■■□□□ 1.83
ABCF3-202ENST00000421340 C16orf71Q8IYS4 520 aaPredicted RBP26.5■■□□□ 1.83
ABCF3-202ENST00000421340 SGIP1Q9BQI5 828 aa26.5■■□□□ 1.83
ABCF3-202ENST00000421340 ATF5Q9Y2D1 282 aaPredicted RBP26.5■■□□□ 1.83
ABCF3-202ENST00000421340 C10orf71Q711Q0 1435 aa26.49■■□□□ 1.83
ABCF3-202ENST00000421340 SALL3Q9BXA9 1300 aa26.49■■□□□ 1.83
ABCF3-202ENST00000421340 ALDH1B1P30837 517 aa26.49■■□□□ 1.83
ABCF3-202ENST00000421340 TNNI3KQ59H18 835 aa26.49■■□□□ 1.83
ABCF3-202ENST00000421340 METTL24Q5JXM2 366 aa26.49■■□□□ 1.83
ABCF3-202ENST00000421340 STYK1Q6J9G0 422 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms