RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
TMEM53-206ENST00000420706 RWDD1Q9H446 243 aaPredicted RBP15.58■□□□□ 0.08
TMEM53-206ENST00000420706 RIC1Q4ADV7 1423 aa15.58■□□□□ 0.08
TMEM53-206ENST00000420706 MYH3P11055 1940 aa15.57■□□□□ 0.08
TMEM53-206ENST00000420706 HMMRO75330 724 aa15.57■□□□□ 0.08
TMEM53-206ENST00000420706 POLD1P28340 1107 aa15.57■□□□□ 0.08
TMEM53-206ENST00000420706 RFX5P48382 616 aaPredicted RBP15.57■□□□□ 0.08
TMEM53-206ENST00000420706 CCDC85AQ96PX6 553 aaPredicted RBP15.57■□□□□ 0.08
TMEM53-206ENST00000420706 BRIP1Q9BX63 1249 aa15.57■□□□□ 0.08
TMEM53-206ENST00000420706 CHMP3Q9Y3E7 222 aa15.57■□□□□ 0.08
TMEM53-206ENST00000420706 KLRG2A4D1S0 409 aaPredicted RBP15.56■□□□□ 0.08
TMEM53-206ENST00000420706 PTGER2P43116 358 aa15.56■□□□□ 0.08
TMEM53-206ENST00000420706 CCDC152Q4G0S7 254 aa15.56■□□□□ 0.08
TMEM53-206ENST00000420706 B4GALNT3Q6L9W6 998 aa15.56■□□□□ 0.08
TMEM53-206ENST00000420706 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
TMEM53-206ENST00000420706 GREM2Q9H772 168 aa15.56■□□□□ 0.08
TMEM53-206ENST00000420706 ITGA6P23229 1130 aa15.55■□□□□ 0.08
TMEM53-206ENST00000420706 FAM161AQ3B820 660 aa15.55■□□□□ 0.08
TMEM53-206ENST00000420706 ANKRD31Q8N7Z5 1873 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 TNRC6CQ9HCJ0 1690 aaKnown RBP15.54■□□□□ 0.08
TMEM53-206ENST00000420706 RTL9Q8NET4 1388 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 ANKRD18BA2A2Z9 1011 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 PDE6BP35913 854 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 PTPN12Q05209 780 aaKnown RBP15.54■□□□□ 0.08
TMEM53-206ENST00000420706 IFIT5Q13325 482 aaKnown RBP15.54■□□□□ 0.08
TMEM53-206ENST00000420706 CCDC57Q2TAC2 916 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 CRY2Q49AN0 593 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 DCTPP1Q9H773 170 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 COPRSQ9NQ92 184 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 SEC31BQ9NQW1 1179 aa15.54■□□□□ 0.08
TMEM53-206ENST00000420706 KLHDC4Q8TBB5 520 aa15.53■□□□□ 0.08
TMEM53-206ENST00000420706 ZNF594Q96JF6 807 aaPredicted RBP15.53■□□□□ 0.08
TMEM53-206ENST00000420706 PA2G4Q9UQ80 394 aaKnown RBP15.53■□□□□ 0.08
TMEM53-206ENST00000420706 NOP58Q9Y2X3 529 aaKnown RBP15.53■□□□□ 0.08
TMEM53-206ENST00000420706 SURF6O75683 361 aaKnown RBP15.52■□□□□ 0.08
TMEM53-206ENST00000420706 C10orf71Q711Q0 1435 aa15.51■□□□□ 0.07
TMEM53-206ENST00000420706 KDM2BQ8NHM5 1336 aa15.51■□□□□ 0.07
TMEM53-206ENST00000420706 SRGNP10124 158 aa15.51■□□□□ 0.07
TMEM53-206ENST00000420706 HOXA10P31260 410 aaPredicted RBP15.51■□□□□ 0.07
TMEM53-206ENST00000420706 DDX46Q7L014 1031 aaKnown RBP15.51■□□□□ 0.07
TMEM53-206ENST00000420706 SMC5Q8IY18 1101 aa15.51■□□□□ 0.07
TMEM53-206ENST00000420706 RBM17Q96I25 401 aaKnown RBP15.51■□□□□ 0.07
TMEM53-206ENST00000420706 PPP1R1BQ9UD71 204 aaPredicted RBP15.51■□□□□ 0.07
TMEM53-206ENST00000420706 PDZRN3Q9UPQ7 1066 aa15.51■□□□□ 0.07
TMEM53-206ENST00000420706 G3BP1Q13283 466 aaKnown RBP eCLIP15.5■□□□□ 0.07
TMEM53-206ENST00000420706 TAF7LQ5H9L4 462 aa15.5■□□□□ 0.07
TMEM53-206ENST00000420706 C2CD5Q86YS7 1000 aa15.5■□□□□ 0.07
TMEM53-206ENST00000420706 RPGRQ92834 1020 aaKnown RBP15.5■□□□□ 0.07
TMEM53-206ENST00000420706 CELF1Q92879 486 aaKnown RBP15.5■□□□□ 0.07
TMEM53-206ENST00000420706 GCC1Q96CN9 775 aa15.5■□□□□ 0.07
TMEM53-206ENST00000420706 CRAMP1Q96RY5 1269 aa15.5■□□□□ 0.07
TMEM53-206ENST00000420706 CDC5LQ99459 802 aaKnown RBP15.5■□□□□ 0.07
TMEM53-206ENST00000420706 EXOC6BQ9Y2D4 811 aa15.5■□□□□ 0.07
TMEM53-206ENST00000420706 TAF1P21675 1872 aa15.49■□□□□ 0.07
TMEM53-206ENST00000420706 H0YIN7 160 aa15.49■□□□□ 0.07
TMEM53-206ENST00000420706 EYA2O00167 538 aa15.49■□□□□ 0.07
TMEM53-206ENST00000420706 NPR1P16066 1061 aa15.49■□□□□ 0.07
TMEM53-206ENST00000420706 IGHMBP2P38935 993 aaKnown RBP15.49■□□□□ 0.07
TMEM53-206ENST00000420706 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
TMEM53-206ENST00000420706 GRAPQ13588 217 aa15.49■□□□□ 0.07
TMEM53-206ENST00000420706 CENPQQ7L2Z9 268 aaPredicted RBP15.49■□□□□ 0.07
TMEM53-206ENST00000420706 GRAPLQ8TC17 118 aaPredicted RBP15.49■□□□□ 0.07
TMEM53-206ENST00000420706 MASTLQ96GX5 879 aa15.49■□□□□ 0.07
TMEM53-206ENST00000420706 PUS3Q9BZE2 481 aaKnown RBP15.49■□□□□ 0.07
TMEM53-206ENST00000420706 SIL1Q9H173 461 aa15.49■□□□□ 0.07
TMEM53-206ENST00000420706 FBXO3Q9UK99 471 aa15.49■□□□□ 0.07
TMEM53-206ENST00000420706 KIF13BQ9NQT8 1826 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 RAB11FIP3O75154 756 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 CHRNA5P30532 468 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 TGFB2P61812 414 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 LRRC24Q50LG9 513 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 HSP90AB4PQ58FF6 505 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 LDHAL6AQ6ZMR3 332 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 ATG9AQ7Z3C6 839 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 ANKRD18AQ8IVF6 992 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 RIPOR2Q9Y4F9 1068 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 COL4A1P02462 1669 aa15.48■□□□□ 0.07
TMEM53-206ENST00000420706 CIAO1O76071 339 aa15.47■□□□□ 0.07
TMEM53-206ENST00000420706 SASH1O94885 1247 aa15.47■□□□□ 0.07
TMEM53-206ENST00000420706 ALDH1B1P30837 517 aa15.47■□□□□ 0.07
TMEM53-206ENST00000420706 STYK1Q6J9G0 422 aa15.47■□□□□ 0.07
TMEM53-206ENST00000420706 ZNF622Q969S3 477 aaKnown RBP eCLIP15.47■□□□□ 0.07
TMEM53-206ENST00000420706 MPHOSPH8Q99549 860 aa15.47■□□□□ 0.07
TMEM53-206ENST00000420706 BSDC1Q9NW68 430 aaPredicted RBP15.47■□□□□ 0.07
TMEM53-206ENST00000420706 CD2APQ9Y5K6 639 aa15.47■□□□□ 0.07
TMEM53-206ENST00000420706 BBOX1O75936 387 aa15.46■□□□□ 0.07
TMEM53-206ENST00000420706 DPEP1P16444 411 aa15.46■□□□□ 0.07
TMEM53-206ENST00000420706 IL15P40933 162 aaPredicted RBP15.46■□□□□ 0.07
TMEM53-206ENST00000420706 OS9Q13438 667 aaPredicted RBP15.46■□□□□ 0.07
TMEM53-206ENST00000420706 RHPN1Q8TCX5 695 aa15.46■□□□□ 0.07
TMEM53-206ENST00000420706 CNNM1Q9NRU3 951 aa15.46■□□□□ 0.07
TMEM53-206ENST00000420706 COL11A2P13942 1736 aaPredicted RBP15.46■□□□□ 0.06
TMEM53-206ENST00000420706 A0A0G2JLW4 131 aa15.45■□□□□ 0.06
TMEM53-206ENST00000420706 APBB1O00213 710 aa15.45■□□□□ 0.06
TMEM53-206ENST00000420706 KCNA3P22001 575 aa15.45■□□□□ 0.06
TMEM53-206ENST00000420706 ANKRD45Q5TZF3 282 aa15.45■□□□□ 0.06
TMEM53-206ENST00000420706 ERC1Q8IUD2 1116 aa15.45■□□□□ 0.06
TMEM53-206ENST00000420706 CNKSR1Q969H4 720 aa15.45■□□□□ 0.06
TMEM53-206ENST00000420706 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms