RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 ZFATQ9P243 1243 aa7.13□□□□□ -1.27
SEMA3A-202ENST00000420047 UBTFP17480 764 aaKnown RBP7.12□□□□□ -1.27
SEMA3A-202ENST00000420047 GRNP28799 593 aaKnown RBP7.12□□□□□ -1.27
SEMA3A-202ENST00000420047 IDH3AP50213 366 aa7.12□□□□□ -1.27
SEMA3A-202ENST00000420047 DZIP1LQ8IYY4 767 aaKnown RBP7.12□□□□□ -1.27
SEMA3A-202ENST00000420047 TMEM130Q8N3G9 435 aa7.12□□□□□ -1.27
SEMA3A-202ENST00000420047 MEGF10Q96KG7 1140 aa7.12□□□□□ -1.27
SEMA3A-202ENST00000420047 HINFPQ9BQA5 517 aa7.12□□□□□ -1.27
SEMA3A-202ENST00000420047 BTBD11A6QL63 1104 aa7.11□□□□□ -1.27
SEMA3A-202ENST00000420047 DLL1O00548 723 aa7.11□□□□□ -1.27
SEMA3A-202ENST00000420047 DEAF1O75398 565 aaPredicted RBP7.11□□□□□ -1.27
SEMA3A-202ENST00000420047 ARSDP51689 593 aa7.11□□□□□ -1.27
SEMA3A-202ENST00000420047 LARP1Q6PKG0 1096 aaKnown RBP7.11□□□□□ -1.27
SEMA3A-202ENST00000420047 IFT43Q96FT9 208 aa7.11□□□□□ -1.27
SEMA3A-202ENST00000420047 RARAP10276 462 aa7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 TARSP26639 723 aaKnown RBP7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 NRLP54845 237 aa7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 MCTP1Q6DN14 999 aa7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 DCAF11Q8TEB1 546 aa7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 AKTIPQ9H8T0 292 aa7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 SRA1Q9HD15 236 aaKnown RBP7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 RB1CC1Q8TDY2 1594 aa7.1□□□□□ -1.27
SEMA3A-202ENST00000420047 PLAURQ03405 335 aa7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 KRT25Q7Z3Z0 450 aa7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 MRPL18Q9H0U6 180 aaKnown RBP7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 SMG9Q9H0W8 520 aaKnown RBP7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 PCMTD2Q9NV79 361 aa7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 KLK14Q9P0G3 267 aa7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 TFIP11Q9UBB9 837 aaKnown RBP7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 MAFBQ9Y5Q3 323 aaPredicted RBP7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 COL17A1Q9UMD9 1497 aaPredicted RBP7.09□□□□□ -1.27
SEMA3A-202ENST00000420047 SASH3O75995 380 aa7.08□□□□□ -1.28
SEMA3A-202ENST00000420047 MICAL2O94851 1124 aa7.08□□□□□ -1.28
SEMA3A-202ENST00000420047 EGFRP00533 1210 aa7.08□□□□□ -1.28
SEMA3A-202ENST00000420047 FSTP19883 344 aa7.08□□□□□ -1.28
SEMA3A-202ENST00000420047 MAP4K3Q8IVH8 894 aa7.08□□□□□ -1.28
SEMA3A-202ENST00000420047 TLR7Q9NYK1 1049 aaKnown RBP7.08□□□□□ -1.28
SEMA3A-202ENST00000420047 MLLT1Q03111 559 aaPredicted RBP7.07□□□□□ -1.28
SEMA3A-202ENST00000420047 PTK7Q13308 1070 aa7.07□□□□□ -1.28
SEMA3A-202ENST00000420047 DGKZQ13574 1117 aa7.07□□□□□ -1.28
SEMA3A-202ENST00000420047 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
SEMA3A-202ENST00000420047 F8W735 103 aaPredicted RBP7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 PAX4O43316 350 aa7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 FOXO3O43524 673 aa7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 EIF2AK2P19525 551 aaKnown RBP7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 DPYDQ12882 1025 aa7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 CACTIN-AS1Q8N1I8 211 aa7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 MYO19Q96H55 970 aa7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 KRTAP9-9Q9BYP9 154 aa7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.06□□□□□ -1.28
SEMA3A-202ENST00000420047 GSC2O15499 205 aa7.05□□□□□ -1.28
SEMA3A-202ENST00000420047 CRTC2Q53ET0 693 aaPredicted RBP7.05□□□□□ -1.28
SEMA3A-202ENST00000420047 Q6ZS46 218 aa7.05□□□□□ -1.28
SEMA3A-202ENST00000420047 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
SEMA3A-202ENST00000420047 QTRT2Q9H974 415 aaKnown RBP7.05□□□□□ -1.28
SEMA3A-202ENST00000420047 NACADO15069 1562 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 LOC102724428A0A0B4J2F2 783 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 FAM196BA6NMK8 535 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 OPLAHO14841 1288 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 PSAPP07602 524 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 HOXD8P13378 290 aaPredicted RBP7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 WEE1P30291 646 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 TXKP42681 527 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 CD97P48960 835 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 SIK1P57059 783 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 KANK4Q5T7N3 995 aaPredicted RBP7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 ANKMY2Q8IV38 441 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 IL22RA1Q8N6P7 574 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 GLMNQ92990 594 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 PLD4Q96BZ4 506 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 RBSNQ9H1K0 784 aa7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 RTCBQ9Y3I0 505 aaKnown RBP7.04□□□□□ -1.28
SEMA3A-202ENST00000420047 PTCD1O75127 700 aaKnown RBP7.03□□□□□ -1.28
SEMA3A-202ENST00000420047 XYLBO75191 536 aa7.03□□□□□ -1.28
SEMA3A-202ENST00000420047 ALX3O95076 343 aa7.03□□□□□ -1.28
SEMA3A-202ENST00000420047 GHRHP01286 108 aa7.03□□□□□ -1.28
SEMA3A-202ENST00000420047 SSTR4P31391 388 aa7.03□□□□□ -1.28
SEMA3A-202ENST00000420047 SOX18P35713 384 aa7.03□□□□□ -1.28
SEMA3A-202ENST00000420047 VTI1AQ96AJ9 217 aa7.03□□□□□ -1.28
SEMA3A-202ENST00000420047 MUC3BQ9H195 1237 aa7.03□□□□□ -1.28
SEMA3A-202ENST00000420047 USP17L15C9J2P7 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L10C9JJH3 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L13C9JLJ4 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L12C9JPN9 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L11C9JVI0 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L21D6R901 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L18D6R9N7 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L22D6RA61 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L17D6RBQ6 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L19D6RCP7 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L20D6RJB6 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 USP17L24Q0WX57 530 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 FMNL2Q96PY5 1086 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 RAXQ9Y2V3 346 aa7.02□□□□□ -1.29
SEMA3A-202ENST00000420047 LGR5O75473 907 aa7.01□□□□□ -1.29
SEMA3A-202ENST00000420047 SETDB1Q15047 1291 aa7.01□□□□□ -1.29
SEMA3A-202ENST00000420047 GDF6Q6KF10 455 aaPredicted RBP7.01□□□□□ -1.29
SEMA3A-202ENST00000420047 FNBP4Q8N3X1 1017 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms