RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 AK7Q96M32 723 aa17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ZSWIM6Q9HCJ5 1215 aa17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 NUP98P52948 1817 aa17.46■□□□□ 0.39
HLA-DPA1-242ENST00000419277 BRD1O95696 1058 aa17.46■□□□□ 0.39
HLA-DPA1-242ENST00000419277 MRE11P49959 708 aa17.46■□□□□ 0.39
HLA-DPA1-242ENST00000419277 KLHL34Q8N239 644 aa17.46■□□□□ 0.39
HLA-DPA1-242ENST00000419277 BOLA2Q9H3K6 86 aa17.46■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ZBTB3Q9H5J0 574 aa17.46■□□□□ 0.39
HLA-DPA1-242ENST00000419277 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
HLA-DPA1-242ENST00000419277 KCNJ4P48050 445 aa17.45■□□□□ 0.38
HLA-DPA1-242ENST00000419277 NMIQ13287 307 aaPredicted RBP17.45■□□□□ 0.38
HLA-DPA1-242ENST00000419277 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
HLA-DPA1-242ENST00000419277 ZGPATQ8N5A5 531 aaKnown RBP17.45■□□□□ 0.38
HLA-DPA1-242ENST00000419277 UPF3BQ9BZI7 483 aaKnown RBP17.45■□□□□ 0.38
HLA-DPA1-242ENST00000419277 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
HLA-DPA1-242ENST00000419277 HSP90B1P14625 803 aaKnown RBP17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 USPL1Q5W0Q7 1092 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 RUFY3Q7L099 469 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 ATG9AQ7Z3C6 839 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 RBM8AQ9Y5S9 174 aaKnown RBP17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 LRP5O75197 1615 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 MBD3O95983 291 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 CASTP20810 708 aaKnown RBP17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 DNAJC10Q8IXB1 793 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 ASAP1Q9ULH1 1129 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 CHMP3Q9Y3E7 222 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 LAMB2P55268 1798 aa17.44■□□□□ 0.38
HLA-DPA1-242ENST00000419277 SPATA31A1Q5TZJ5 1347 aa17.43■□□□□ 0.38
HLA-DPA1-242ENST00000419277 CREB3L3Q68CJ9 461 aa17.43■□□□□ 0.38
HLA-DPA1-242ENST00000419277 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
HLA-DPA1-242ENST00000419277 CSF1RP07333 972 aa17.42■□□□□ 0.38
HLA-DPA1-242ENST00000419277 CYP19A1P11511 503 aaPredicted RBP17.42■□□□□ 0.38
HLA-DPA1-242ENST00000419277 BARGINQ6ZT62 677 aa17.42■□□□□ 0.38
HLA-DPA1-242ENST00000419277 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
HLA-DPA1-242ENST00000419277 HELLSQ9NRZ9 838 aa17.42■□□□□ 0.38
HLA-DPA1-242ENST00000419277 SLIT2O94813 1529 aa17.42■□□□□ 0.38
HLA-DPA1-242ENST00000419277 A0A0D9SFI3 127 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 AK2P54819 239 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 CEP126Q9P2H0 1117 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 DDX49Q9Y6V7 483 aaKnown RBP17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 MYH7P12883 1935 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 RGL2O15211 777 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 HMGB1P09429 215 aaKnown RBP17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 PTH1RQ03431 593 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 CHMP4CQ96CF2 233 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 FAM227BQ96M60 508 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
HLA-DPA1-242ENST00000419277 ZFYP08048 801 aaPredicted RBP17.4■□□□□ 0.38
HLA-DPA1-242ENST00000419277 IFIT5Q13325 482 aaKnown RBP17.4■□□□□ 0.38
HLA-DPA1-242ENST00000419277 DDB1Q16531 1140 aa17.4■□□□□ 0.38
HLA-DPA1-242ENST00000419277 SLC27A2O14975 620 aa17.39■□□□□ 0.37
HLA-DPA1-242ENST00000419277 TAF5LO75529 589 aa17.39■□□□□ 0.37
HLA-DPA1-242ENST00000419277 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
HLA-DPA1-242ENST00000419277 MCTP1Q6DN14 999 aa17.39■□□□□ 0.37
HLA-DPA1-242ENST00000419277 BLOC1S2Q6QNY1 142 aa17.39■□□□□ 0.37
HLA-DPA1-242ENST00000419277 DSCC1Q9BVC3 393 aa17.39■□□□□ 0.37
HLA-DPA1-242ENST00000419277 PAG1Q9NWQ8 432 aa17.39■□□□□ 0.37
HLA-DPA1-242ENST00000419277 PDCP20941 246 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 CSPP1Q1MSJ5 1256 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 LMBRD1Q9NUN5 540 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZDHHC9Q9Y397 364 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 COL5A3P25940 1745 aaPredicted RBP17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 A0A1B0GUL7 405 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 TAF7LQ5H9L4 462 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZNF512BQ96KM6 892 aaPredicted RBP17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 SMC3Q9UQE7 1217 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 SPATA31A5Q5VU36 1347 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 SPATA31A7Q8IWB4 1347 aa17.38■□□□□ 0.37
HLA-DPA1-242ENST00000419277 BCORQ6W2J9 1755 aa17.37■□□□□ 0.37
HLA-DPA1-242ENST00000419277 TOM1O60784 492 aa17.37■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZNF445P59923 1031 aa17.37■□□□□ 0.37
HLA-DPA1-242ENST00000419277 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
HLA-DPA1-242ENST00000419277 KAT6BQ8WYB5 2073 aa17.37■□□□□ 0.37
HLA-DPA1-242ENST00000419277 IFIT1P09914 478 aaKnown RBP17.36■□□□□ 0.37
HLA-DPA1-242ENST00000419277 PKP1Q13835 747 aa17.36■□□□□ 0.37
HLA-DPA1-242ENST00000419277 TMEM87AQ8NBN3 555 aa17.36■□□□□ 0.37
HLA-DPA1-242ENST00000419277 DNAJC2Q99543 621 aaKnown RBP17.36■□□□□ 0.37
HLA-DPA1-242ENST00000419277 RPS6KB1P23443 525 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 CTSWP56202 376 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 PARP10Q53GL7 1025 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 GRPEL1Q9HAV7 217 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 PDE8AO60658 829 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
HLA-DPA1-242ENST00000419277 RTL9Q8NET4 1388 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms