RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 RTL9Q8NET4 1388 aa20.53■□□□□ 0.88
NDUFA3-206ENST00000419113 KAZALD1Q96I82 304 aa20.52■□□□□ 0.88
NDUFA3-206ENST00000419113 COL11A2P13942 1736 aaPredicted RBP20.51■□□□□ 0.87
NDUFA3-206ENST00000419113 NPR1P16066 1061 aa20.51■□□□□ 0.87
NDUFA3-206ENST00000419113 MTX1Q13505 466 aa20.51■□□□□ 0.87
NDUFA3-206ENST00000419113 LMBR1LQ6UX01 489 aa20.51■□□□□ 0.87
NDUFA3-206ENST00000419113 C2CD5Q86YS7 1000 aa20.51■□□□□ 0.87
NDUFA3-206ENST00000419113 MASTLQ96GX5 879 aa20.51■□□□□ 0.87
NDUFA3-206ENST00000419113 RBM17Q96I25 401 aaKnown RBP20.51■□□□□ 0.87
NDUFA3-206ENST00000419113 KIAA1551Q9HCM1 1747 aa20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 SRGNP10124 158 aa20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 HOXA10P31260 410 aaPredicted RBP20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 EPHA10Q5JZY3 1008 aa20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 STYK1Q6J9G0 422 aa20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 DDX46Q7L014 1031 aaKnown RBP20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 RPAP2Q8IXW5 612 aaPredicted RBP20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 KLHL34Q8N239 644 aa20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 CHMP3Q9Y3E7 222 aa20.5■□□□□ 0.87
NDUFA3-206ENST00000419113 ALDH1B1P30837 517 aa20.49■□□□□ 0.87
NDUFA3-206ENST00000419113 IRX6P78412 446 aaPredicted RBP20.49■□□□□ 0.87
NDUFA3-206ENST00000419113 IFIT5Q13325 482 aaKnown RBP20.49■□□□□ 0.87
NDUFA3-206ENST00000419113 CCDC57Q2TAC2 916 aa20.49■□□□□ 0.87
NDUFA3-206ENST00000419113 ANKRD44Q8N8A2 993 aa20.49■□□□□ 0.87
NDUFA3-206ENST00000419113 EXOC6Q8TAG9 804 aa20.49■□□□□ 0.87
NDUFA3-206ENST00000419113 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
NDUFA3-206ENST00000419113 ANKRD18BA2A2Z9 1011 aa20.48■□□□□ 0.87
NDUFA3-206ENST00000419113 C3orf67Q6ZVT6 689 aa20.48■□□□□ 0.87
NDUFA3-206ENST00000419113 CNKSR1Q969H4 720 aa20.48■□□□□ 0.87
NDUFA3-206ENST00000419113 CRAMP1Q96RY5 1269 aa20.48■□□□□ 0.87
NDUFA3-206ENST00000419113 ATP8B2P98198 1209 aa20.47■□□□□ 0.87
NDUFA3-206ENST00000419113 FHDC1Q9C0D6 1143 aaPredicted RBP20.47■□□□□ 0.87
NDUFA3-206ENST00000419113 GREM2Q9H772 168 aa20.47■□□□□ 0.87
NDUFA3-206ENST00000419113 C1orf115Q9H7X2 142 aa20.47■□□□□ 0.87
NDUFA3-206ENST00000419113 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
NDUFA3-206ENST00000419113 SRGAP3O43295 1099 aa20.46■□□□□ 0.87
NDUFA3-206ENST00000419113 HMMRO75330 724 aa20.46■□□□□ 0.87
NDUFA3-206ENST00000419113 ITGA6P23229 1130 aa20.46■□□□□ 0.87
NDUFA3-206ENST00000419113 FAM161AQ3B820 660 aa20.46■□□□□ 0.87
NDUFA3-206ENST00000419113 ERICH6BQ5W0A0 696 aa20.46■□□□□ 0.87
NDUFA3-206ENST00000419113 CEP85Q6P2H3 762 aa20.46■□□□□ 0.87
NDUFA3-206ENST00000419113 TMC4Q7Z404 712 aa20.46■□□□□ 0.87
NDUFA3-206ENST00000419113 CACNA1SQ13698 1873 aa20.45■□□□□ 0.86
NDUFA3-206ENST00000419113 DPEP1P16444 411 aa20.45■□□□□ 0.86
NDUFA3-206ENST00000419113 GRAPQ13588 217 aa20.45■□□□□ 0.86
NDUFA3-206ENST00000419113 TAF7LQ5H9L4 462 aa20.45■□□□□ 0.86
NDUFA3-206ENST00000419113 GRAPLQ8TC17 118 aaPredicted RBP20.45■□□□□ 0.86
NDUFA3-206ENST00000419113 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
NDUFA3-206ENST00000419113 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
NDUFA3-206ENST00000419113 BBOX1O75936 387 aa20.44■□□□□ 0.86
NDUFA3-206ENST00000419113 CHRNA5P30532 468 aa20.44■□□□□ 0.86
NDUFA3-206ENST00000419113 IGHMBP2P38935 993 aaKnown RBP20.44■□□□□ 0.86
NDUFA3-206ENST00000419113 ANKRD18AQ8IVF6 992 aa20.44■□□□□ 0.86
NDUFA3-206ENST00000419113 SYT17Q9BSW7 474 aa20.44■□□□□ 0.86
NDUFA3-206ENST00000419113 PIM2Q9P1W9 311 aa20.44■□□□□ 0.86
NDUFA3-206ENST00000419113 FBXO3Q9UK99 471 aa20.44■□□□□ 0.86
NDUFA3-206ENST00000419113 A0A0G2JLW4 131 aa20.43■□□□□ 0.86
NDUFA3-206ENST00000419113 TTLL6Q8N841 843 aa20.43■□□□□ 0.86
NDUFA3-206ENST00000419113 SSH3Q8TE77 659 aa20.43■□□□□ 0.86
NDUFA3-206ENST00000419113 SPEF2Q9C093 1822 aa20.42■□□□□ 0.86
NDUFA3-206ENST00000419113 TAF1P21675 1872 aa20.42■□□□□ 0.86
NDUFA3-206ENST00000419113 RPS8P62241 208 aaKnown RBP20.42■□□□□ 0.86
NDUFA3-206ENST00000419113 POLA2Q14181 598 aa20.42■□□□□ 0.86
NDUFA3-206ENST00000419113 MPHOSPH8Q99549 860 aa20.42■□□□□ 0.86
NDUFA3-206ENST00000419113 SEC31BQ9NQW1 1179 aa20.42■□□□□ 0.86
NDUFA3-206ENST00000419113 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
NDUFA3-206ENST00000419113 KCNA3P22001 575 aa20.41■□□□□ 0.86
NDUFA3-206ENST00000419113 TMX4Q9H1E5 349 aaPredicted RBP20.41■□□□□ 0.86
NDUFA3-206ENST00000419113 COPRSQ9NQ92 184 aa20.41■□□□□ 0.86
NDUFA3-206ENST00000419113 RFX5P48382 616 aaPredicted RBP20.4■□□□□ 0.86
NDUFA3-206ENST00000419113 CELF1Q92879 486 aaKnown RBP20.4■□□□□ 0.86
NDUFA3-206ENST00000419113 SLX4Q8IY92 1834 aa20.39■□□□□ 0.86
NDUFA3-206ENST00000419113 ARFGEF1Q9Y6D6 1849 aa20.39■□□□□ 0.86
NDUFA3-206ENST00000419113 PPEF1O14829 653 aaPredicted RBP20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 PTPN12Q05209 780 aaKnown RBP20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 DALRD3Q5D0E6 543 aaKnown RBP20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 CC2D2BQ6DHV5 1058 aa20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 PRPF40BQ6NWY9 871 aaKnown RBP20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 NLGN2Q8NFZ4 835 aa20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 BSDC1Q9NW68 430 aaPredicted RBP20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 PCDHB15Q9Y5E8 787 aa20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.85
NDUFA3-206ENST00000419113 GRIPAP1Q4V328 841 aa20.38■□□□□ 0.85
NDUFA3-206ENST00000419113 HSP90AB4PQ58FF6 505 aa20.38■□□□□ 0.85
NDUFA3-206ENST00000419113 SOGA3Q5TF21 947 aa20.38■□□□□ 0.85
NDUFA3-206ENST00000419113 LDHAL6AQ6ZMR3 332 aa20.38■□□□□ 0.85
NDUFA3-206ENST00000419113 CIAO1O76071 339 aa20.37■□□□□ 0.85
NDUFA3-206ENST00000419113 HDAC1Q13547 482 aaPredicted RBP20.37■□□□□ 0.85
NDUFA3-206ENST00000419113 SP8Q8IXZ3 490 aa20.37■□□□□ 0.85
NDUFA3-206ENST00000419113 RWDD1Q9H446 243 aaPredicted RBP20.37■□□□□ 0.85
NDUFA3-206ENST00000419113 CNNM1Q9NRU3 951 aa20.37■□□□□ 0.85
NDUFA3-206ENST00000419113 EYA2O00167 538 aa20.36■□□□□ 0.85
NDUFA3-206ENST00000419113 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.85
NDUFA3-206ENST00000419113 SIRT2Q8IXJ6 389 aa20.36■□□□□ 0.85
NDUFA3-206ENST00000419113 ZNF594Q96JF6 807 aaPredicted RBP20.36■□□□□ 0.85
NDUFA3-206ENST00000419113 NOP58Q9Y2X3 529 aaKnown RBP20.36■□□□□ 0.85
NDUFA3-206ENST00000419113 ATP6V0A2Q9Y487 856 aa20.36■□□□□ 0.85
NDUFA3-206ENST00000419113 MROH5Q6ZUA9 1318 aa20.35■□□□□ 0.85
NDUFA3-206ENST00000419113 SURF6O75683 361 aaKnown RBP20.35■□□□□ 0.85
NDUFA3-206ENST00000419113 IL15P40933 162 aaPredicted RBP20.35■□□□□ 0.85
NDUFA3-206ENST00000419113 ERC1Q8IUD2 1116 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms