RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
SEMA3B-203ENST00000419007 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
SEMA3B-203ENST00000419007 TOB2Q14106 344 aaPredicted RBP17.96■□□□□ 0.47
SEMA3B-203ENST00000419007 AMOTQ4VCS5 1084 aa17.96■□□□□ 0.47
SEMA3B-203ENST00000419007 CHGBP05060 677 aa17.96■□□□□ 0.47
SEMA3B-203ENST00000419007 NEXNQ0ZGT2 675 aa17.96■□□□□ 0.47
SEMA3B-203ENST00000419007 CCDC94Q9BW85 323 aaPredicted RBP17.96■□□□□ 0.47
SEMA3B-203ENST00000419007 CBX8Q9HC52 389 aa17.96■□□□□ 0.47
SEMA3B-203ENST00000419007 ANKARQ7Z5J8 1434 aa17.96■□□□□ 0.47
SEMA3B-203ENST00000419007 LRMPQ12912 555 aa17.96■□□□□ 0.46
SEMA3B-203ENST00000419007 LEO1Q8WVC0 666 aaPredicted RBP17.96■□□□□ 0.46
SEMA3B-203ENST00000419007 NAP1L2Q9ULW6 460 aaPredicted RBP17.96■□□□□ 0.46
SEMA3B-203ENST00000419007 N4BP2Q86UW6 1770 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 PPFIA3O75145 1194 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 TPM3P06753 285 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 CCDC129Q6ZRS4 1044 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 KCNH5Q8NCM2 988 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 NRBP1Q9UHY1 535 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 RIOK3O14730 519 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 NR1I2O75469 434 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 CBX1P83916 185 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 MYD88Q99836 296 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 BCL2L12Q9HB09 334 aa17.95■□□□□ 0.46
SEMA3B-203ENST00000419007 DNAJC25Q9H1X3 360 aa17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 NPHP3Q7Z494 1330 aa17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 ANKRD24Q8TF21 1146 aa17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 DDX21Q9NR30 783 aaKnown RBP eCLIP17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 IGKV5-2P06315 115 aa17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 EPHA10Q5JZY3 1008 aa17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 PPP4R3BQ5MIZ7 849 aa17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 BRF1Q92994 677 aa17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 C16orf45Q96MC5 204 aaPredicted RBP17.94■□□□□ 0.46
SEMA3B-203ENST00000419007 ZNF165P49910 485 aa17.93■□□□□ 0.46
SEMA3B-203ENST00000419007 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
SEMA3B-203ENST00000419007 ELP1O95163 1332 aa17.93■□□□□ 0.46
SEMA3B-203ENST00000419007 TAF5LO75529 589 aa17.92■□□□□ 0.46
SEMA3B-203ENST00000419007 GCP02774 474 aa17.92■□□□□ 0.46
SEMA3B-203ENST00000419007 Q6ZUG5 572 aa17.92■□□□□ 0.46
SEMA3B-203ENST00000419007 XAGE3Q8WTP9 111 aa17.92■□□□□ 0.46
SEMA3B-203ENST00000419007 DDX19AQ9NUU7 478 aaKnown RBP17.92■□□□□ 0.46
SEMA3B-203ENST00000419007 PXDNQ92626 1479 aa17.92■□□□□ 0.46
SEMA3B-203ENST00000419007 COPS6Q7L5N1 327 aa17.92■□□□□ 0.46
SEMA3B-203ENST00000419007 NEK1Q96PY6 1258 aa17.92■□□□□ 0.46
SEMA3B-203ENST00000419007 PGBD1Q96JS3 809 aa17.91■□□□□ 0.46
SEMA3B-203ENST00000419007 HMG20BQ9P0W2 317 aa17.91■□□□□ 0.46
SEMA3B-203ENST00000419007 LTN1O94822 1766 aa17.91■□□□□ 0.46
SEMA3B-203ENST00000419007 GTF2F1P35269 517 aaKnown RBP eCLIP17.91■□□□□ 0.46
SEMA3B-203ENST00000419007 DDX46Q7L014 1031 aaKnown RBP17.91■□□□□ 0.46
SEMA3B-203ENST00000419007 CLSTN2Q9H4D0 955 aa17.91■□□□□ 0.46
SEMA3B-203ENST00000419007 TFCP2Q12800 502 aa17.9■□□□□ 0.46
SEMA3B-203ENST00000419007 SPDYE4A6NLX3 237 aa17.9■□□□□ 0.46
SEMA3B-203ENST00000419007 PDIA4P13667 645 aaKnown RBP17.9■□□□□ 0.46
SEMA3B-203ENST00000419007 FBXW7Q969H0 707 aa17.9■□□□□ 0.46
SEMA3B-203ENST00000419007 DBNLQ9UJU6 430 aaKnown RBP17.9■□□□□ 0.46
SEMA3B-203ENST00000419007 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
SEMA3B-203ENST00000419007 PDCL2Q8N4E4 241 aa17.9■□□□□ 0.46
SEMA3B-203ENST00000419007 GCKRQ14397 625 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 UBE3BQ7Z3V4 1068 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 GTF3C6Q969F1 213 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 MED23Q9ULK4 1368 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 ATP5J2-PTCD1G3V325 749 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 PTCD1O75127 700 aaKnown RBP17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 KRT32Q14532 448 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 MARF1Q9Y4F3 1742 aaKnown RBP17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 GOLGA6L19H0YKK7 550 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 ZNF75DP51815 510 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 ZNF592Q92610 1267 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 ORAI2Q96SN7 254 aa17.89■□□□□ 0.45
SEMA3B-203ENST00000419007 PDIA6Q15084 440 aa17.88■□□□□ 0.45
SEMA3B-203ENST00000419007 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
SEMA3B-203ENST00000419007 FTOQ9C0B1 505 aaKnown RBP eCLIP17.88■□□□□ 0.45
SEMA3B-203ENST00000419007 AXIN2Q9Y2T1 843 aa17.88■□□□□ 0.45
SEMA3B-203ENST00000419007 CRYBG1Q9Y4K1 1723 aa17.88■□□□□ 0.45
SEMA3B-203ENST00000419007 RGPD2P0DJD1 1756 aa17.88■□□□□ 0.45
SEMA3B-203ENST00000419007 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-203ENST00000419007 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
SEMA3B-203ENST00000419007 A0A087WWV3 80 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 SLFNL1Q499Z3 407 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 TNNI3KQ59H18 835 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 ZNF790Q6PG37 636 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 FPGT-TNNI3KV9GXZ4 949 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 KDM3BQ7LBC6 1761 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 CYP21A2P08686 494 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 CCT2P78371 535 aaKnown RBP17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 GUCY1B3Q02153 619 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 MED1Q15648 1581 aaPredicted RBP17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 SMAP1Q8IYB5 467 aaPredicted RBP17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 NEUROD6Q96NK8 337 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 ARHGEF25Q86VW2 580 aa17.87■□□□□ 0.45
SEMA3B-203ENST00000419007 ATP2B3Q16720 1220 aa17.86■□□□□ 0.45
SEMA3B-203ENST00000419007 NLRP2Q9NX02 1062 aa17.86■□□□□ 0.45
SEMA3B-203ENST00000419007 CFAP45Q9UL16 551 aa17.86■□□□□ 0.45
SEMA3B-203ENST00000419007 UTYO14607 1347 aa17.86■□□□□ 0.45
SEMA3B-203ENST00000419007 RESTQ13127 1097 aa17.86■□□□□ 0.45
SEMA3B-203ENST00000419007 TPD52L1Q16890 204 aaPredicted RBP17.86■□□□□ 0.45
SEMA3B-203ENST00000419007 ANKRD13DQ6ZTN6 518 aa17.86■□□□□ 0.45
SEMA3B-203ENST00000419007 ZHX1Q9UKY1 873 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms