RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 CCAR2Q8N163 923 aaKnown RBP20.52■□□□□ 0.88
PMS1-206ENST00000418224 BICD2Q8TD16 824 aa20.52■□□□□ 0.88
PMS1-206ENST00000418224 RGS22Q8NE09 1264 aa20.52■□□□□ 0.88
PMS1-206ENST00000418224 NR1I2O75469 434 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 CDC37L1Q7L3B6 337 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 RUFY2Q8WXA3 655 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 CYP46A1Q9Y6A2 500 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 GLRX3O76003 335 aaKnown RBP20.51■□□□□ 0.87
PMS1-206ENST00000418224 HOXC9P31274 260 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 GYS2P54840 703 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 DNAAF4Q8WXU2 420 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 SPATA32Q96LK8 384 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 FAM208AQ9UK61 1670 aaKnown RBP20.51■□□□□ 0.87
PMS1-206ENST00000418224 A0A087WWV3 80 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 CLASRPQ8N2M8 674 aaKnown RBP20.51■□□□□ 0.87
PMS1-206ENST00000418224 LCMT1Q9UIC8 334 aa20.51■□□□□ 0.87
PMS1-206ENST00000418224 NFATC2IPQ8NCF5 419 aa20.5■□□□□ 0.87
PMS1-206ENST00000418224 FBXW7Q969H0 707 aa20.5■□□□□ 0.87
PMS1-206ENST00000418224 ADAMTS13Q76LX8 1427 aa20.5■□□□□ 0.87
PMS1-206ENST00000418224 SNW1Q13573 536 aaKnown RBP20.5■□□□□ 0.87
PMS1-206ENST00000418224 HSP90AB4PQ58FF6 505 aa20.5■□□□□ 0.87
PMS1-206ENST00000418224 SMARCE1Q969G3 411 aa20.5■□□□□ 0.87
PMS1-206ENST00000418224 AMOTL2Q9Y2J4 779 aa20.5■□□□□ 0.87
PMS1-206ENST00000418224 RNF20Q5VTR2 975 aa20.49■□□□□ 0.87
PMS1-206ENST00000418224 TMCO3Q6UWJ1 677 aa20.49■□□□□ 0.87
PMS1-206ENST00000418224 NALCNQ8IZF0 1738 aa20.49■□□□□ 0.87
PMS1-206ENST00000418224 CCDC191Q8NCU4 936 aa20.49■□□□□ 0.87
PMS1-206ENST00000418224 SEC31AO94979 1220 aaKnown RBP20.49■□□□□ 0.87
PMS1-206ENST00000418224 CCZ1BP86790 482 aa20.49■□□□□ 0.87
PMS1-206ENST00000418224 CCZ1P86791 482 aaPredicted RBP20.49■□□□□ 0.87
PMS1-206ENST00000418224 CLSTN2Q9H4D0 955 aa20.49■□□□□ 0.87
PMS1-206ENST00000418224 IFIT2P09913 472 aaKnown RBP20.48■□□□□ 0.87
PMS1-206ENST00000418224 KLHL34Q8N239 644 aa20.48■□□□□ 0.87
PMS1-206ENST00000418224 TXLNBQ8N3L3 684 aa20.48■□□□□ 0.87
PMS1-206ENST00000418224 DDX19AQ9NUU7 478 aaKnown RBP20.48■□□□□ 0.87
PMS1-206ENST00000418224 PA2G4Q9UQ80 394 aaKnown RBP20.48■□□□□ 0.87
PMS1-206ENST00000418224 BECN2A8MW95 431 aa20.48■□□□□ 0.87
PMS1-206ENST00000418224 TPM4P67936 248 aa20.48■□□□□ 0.87
PMS1-206ENST00000418224 FMN2Q9NZ56 1722 aa20.48■□□□□ 0.87
PMS1-206ENST00000418224 NEMFO60524 1076 aa20.48■□□□□ 0.87
PMS1-206ENST00000418224 ZKSCAN1P17029 563 aaPredicted RBP20.48■□□□□ 0.87
PMS1-206ENST00000418224 ME3Q16798 604 aa20.48■□□□□ 0.87
PMS1-206ENST00000418224 BEND3Q5T5X7 828 aa20.48■□□□□ 0.87
PMS1-206ENST00000418224 VPS53Q5VIR6 699 aa20.47■□□□□ 0.87
PMS1-206ENST00000418224 TCEANC2Q96MN5 208 aa20.47■□□□□ 0.87
PMS1-206ENST00000418224 MYO1CO00159 1063 aa20.47■□□□□ 0.87
PMS1-206ENST00000418224 C11orf57Q6ZUT1 292 aaPredicted RBP20.47■□□□□ 0.87
PMS1-206ENST00000418224 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
PMS1-206ENST00000418224 C9orf78Q9NZ63 289 aaPredicted RBP20.47■□□□□ 0.87
PMS1-206ENST00000418224 PXDNLA1KZ92 1463 aa20.46■□□□□ 0.87
PMS1-206ENST00000418224 KCNQ3O43525 872 aa20.46■□□□□ 0.87
PMS1-206ENST00000418224 ZSCAN26Q16670 478 aa20.46■□□□□ 0.87
PMS1-206ENST00000418224 ABTB2Q8N961 1025 aa20.46■□□□□ 0.87
PMS1-206ENST00000418224 EFCC1Q9HA90 598 aa20.46■□□□□ 0.87
PMS1-206ENST00000418224 LGR6Q9HBX8 967 aa20.46■□□□□ 0.87
PMS1-206ENST00000418224 SH2B1Q9NRF2 756 aaPredicted RBP20.46■□□□□ 0.87
PMS1-206ENST00000418224 ECHDC1Q9NTX5 307 aa20.46■□□□□ 0.87
PMS1-206ENST00000418224 GPATCH3Q96I76 525 aa20.46■□□□□ 0.87
PMS1-206ENST00000418224 UBXN4Q92575 508 aa20.45■□□□□ 0.87
PMS1-206ENST00000418224 TTC41PQ6P2S7 1318 aa20.45■□□□□ 0.86
PMS1-206ENST00000418224 CDC25BP30305 580 aa20.45■□□□□ 0.86
PMS1-206ENST00000418224 ST3GAL1Q11201 340 aa20.45■□□□□ 0.86
PMS1-206ENST00000418224 AACSQ86V21 672 aa20.45■□□□□ 0.86
PMS1-206ENST00000418224 TOPAZ1Q8N9V7 1692 aa20.45■□□□□ 0.86
PMS1-206ENST00000418224 DHX16O60231 1041 aaKnown RBP20.45■□□□□ 0.86
PMS1-206ENST00000418224 ZSWIM6Q9HCJ5 1215 aa20.45■□□□□ 0.86
PMS1-206ENST00000418224 ARGLU1Q9NWB6 273 aaPredicted RBP20.45■□□□□ 0.86
PMS1-206ENST00000418224 RBM8AQ9Y5S9 174 aaKnown RBP20.45■□□□□ 0.86
PMS1-206ENST00000418224 GTF2A1P52655 376 aaPredicted RBP20.44■□□□□ 0.86
PMS1-206ENST00000418224 HOMER1Q86YM7 354 aa20.44■□□□□ 0.86
PMS1-206ENST00000418224 LEO1Q8WVC0 666 aaPredicted RBP20.44■□□□□ 0.86
PMS1-206ENST00000418224 CCDC34Q96HJ3 373 aa20.44■□□□□ 0.86
PMS1-206ENST00000418224 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.44■□□□□ 0.866e-6■■□□□ 13.3
PMS1-206ENST00000418224 EIF4A1P60842 406 aaKnown RBP20.44■□□□□ 0.86
PMS1-206ENST00000418224 MRFAP1L1Q96HT8 127 aa20.44■□□□□ 0.86
PMS1-206ENST00000418224 FAM227BQ96M60 508 aa20.44■□□□□ 0.86
PMS1-206ENST00000418224 EPC1Q9H2F5 836 aa20.44■□□□□ 0.86
PMS1-206ENST00000418224 TPCN1Q9ULQ1 816 aa20.44■□□□□ 0.86
PMS1-206ENST00000418224 CEBPZQ03701 1054 aaKnown RBP20.43■□□□□ 0.86
PMS1-206ENST00000418224 GPS2Q13227 327 aa20.43■□□□□ 0.86
PMS1-206ENST00000418224 IQCB1Q15051 598 aa20.43■□□□□ 0.86
PMS1-206ENST00000418224 BABAM1Q9NWV8 329 aa20.43■□□□□ 0.86
PMS1-206ENST00000418224 NPHP3Q7Z494 1330 aa20.43■□□□□ 0.86
PMS1-206ENST00000418224 OAS2P29728 719 aaKnown RBP20.43■□□□□ 0.86
PMS1-206ENST00000418224 SCAND2PQ9GZW5 306 aaPredicted RBP20.43■□□□□ 0.86
PMS1-206ENST00000418224 NOP2P46087 812 aaKnown RBP20.43■□□□□ 0.86
PMS1-206ENST00000418224 TEFQ10587 303 aa20.43■□□□□ 0.86
PMS1-206ENST00000418224 SECISBP2LQ93073 1101 aaKnown RBP20.43■□□□□ 0.86
PMS1-206ENST00000418224 PTPRUQ92729 1446 aa20.42■□□□□ 0.86
PMS1-206ENST00000418224 COL9A3Q14050 684 aaPredicted RBP20.42■□□□□ 0.86
PMS1-206ENST00000418224 CREB3L3Q68CJ9 461 aa20.42■□□□□ 0.86
PMS1-206ENST00000418224 PGBD1Q96JS3 809 aa20.42■□□□□ 0.86
PMS1-206ENST00000418224 EID1Q9Y6B2 187 aa20.42■□□□□ 0.86
PMS1-206ENST00000418224 ELP1O95163 1332 aa20.42■□□□□ 0.86
PMS1-206ENST00000418224 KIF2AO00139 706 aaPredicted RBP20.42■□□□□ 0.86
PMS1-206ENST00000418224 STK3Q13188 491 aa20.42■□□□□ 0.86
PMS1-206ENST00000418224 L2HGDHQ9H9P8 463 aa20.42■□□□□ 0.86
PMS1-206ENST00000418224 CACNA1FO60840 1977 aa20.41■□□□□ 0.86
PMS1-206ENST00000418224 ZRANB2O95218 330 aaKnown RBP eCLIP20.41■□□□□ 0.865e-9■□□□□ 10.7
PMS1-206ENST00000418224 MUM1L1Q5H9M0 696 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms