RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 PSD3Q9NYI0 1048 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 RTL1A6NKG5 1358 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 TUBB4AP04350 444 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 ZNF75DP51815 510 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 ZC3H6P61129 1189 aaKnown RBP6.97□□□□□ -1.29
NPHP1-204ENST00000417665 LRMPQ12912 555 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 CFAP70Q5T0N1 1121 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 GIMAP6Q6P9H5 292 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 TMCO3Q6UWJ1 677 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 PTF1AQ7RTS3 328 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 CCDC91Q7Z6B0 441 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 PLA2G4DQ86XP0 818 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 IFNLR1Q8IU57 520 aaPredicted RBP6.97□□□□□ -1.29
NPHP1-204ENST00000417665 MNS1Q8NEH6 495 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 MTFR1LQ9H019 292 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 TMX1Q9H3N1 280 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 KCND1Q9NSA2 647 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 RRP15Q9Y3B9 282 aaKnown RBP6.97□□□□□ -1.29
NPHP1-204ENST00000417665 BCL9O00512 1426 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 SHANK3Q9BYB0 1731 aa6.97□□□□□ -1.29
NPHP1-204ENST00000417665 LRRC37A3O60309 1634 aa6.96□□□□□ -1.29
NPHP1-204ENST00000417665 ADGRB1O14514 1584 aa6.96□□□□□ -1.29
NPHP1-204ENST00000417665 TRIM66O15016 1216 aa6.96□□□□□ -1.29
NPHP1-204ENST00000417665 KIF1CO43896 1103 aaKnown RBP6.96□□□□□ -1.29
NPHP1-204ENST00000417665 IVLP07476 585 aa6.96□□□□□ -1.29
NPHP1-204ENST00000417665 SDSP20132 328 aa6.96□□□□□ -1.29
NPHP1-204ENST00000417665 MAGEA9P43362 315 aa6.96□□□□□ -1.29
NPHP1-204ENST00000417665 NGDNQ8NEJ9 315 aaKnown RBP6.96□□□□□ -1.29
NPHP1-204ENST00000417665 SRCIN1Q9C0H9 1055 aa6.96□□□□□ -1.29
NPHP1-204ENST00000417665 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.96□□□□□ -1.29
NPHP1-204ENST00000417665 PLEKHG2Q9H7P9 1386 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 ZRANB2O95218 330 aaKnown RBP eCLIP6.96□□□□□ -1.3
NPHP1-204ENST00000417665 TPM1P09493 284 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-204ENST00000417665 ATP2B1P20020 1258 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 CLCN6P51797 869 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 CARD10Q9BWT7 1032 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 TRIM5Q9C035 493 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 DCTPP1Q9H773 170 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 CNPY2Q9Y2B0 182 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 AATKQ6ZMQ8 1374 aa6.96□□□□□ -1.3
NPHP1-204ENST00000417665 COL5A2P05997 1499 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 ERBB3P21860 1342 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 WASLO00401 505 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 GYS2P54840 703 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 SLC15A2Q16348 729 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 MAP3K11Q16584 847 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 FOXD4L6Q3SYB3 417 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 FOXD4L3Q6VB84 417 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 SUGP1Q8IWZ8 645 aaKnown RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 SIRT2Q8IXJ6 389 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 CNPY4Q8N129 248 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 SMARCE1Q969G3 411 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 EXOC4Q96A65 974 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 UBXN6Q9BZV1 441 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 L2HGDHQ9H9P8 463 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 STK32BQ9NY57 414 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 DONSONQ9NYP3 566 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 CLIP2Q9UDT6 1046 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 KCNG1Q9UIX4 513 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 ITSN1Q15811 1721 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 KIF24Q5T7B8 1368 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 POLR3GO15318 223 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 CAVIN2O95810 425 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 U2AF1L5P0DN76 240 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 U2AF1Q01081 240 aaKnown RBP eCLIP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 SWT1Q5T5J6 900 aaKnown RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 LRRC8AQ8IWT6 810 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 GPATCH11Q8N954 259 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 TDRD7Q8NHU6 1098 aaKnown RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 CACTINQ8WUQ7 758 aaKnown RBP6.95□□□□□ -1.3
NPHP1-204ENST00000417665 IL17RAQ96F46 866 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 C1orf115Q9H7X2 142 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 LCMT1Q9UIC8 334 aa6.95□□□□□ -1.3
NPHP1-204ENST00000417665 CRB1P82279 1406 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 ACTN2P35609 894 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 TMPOP42166 694 aaKnown RBP6.94□□□□□ -1.3
NPHP1-204ENST00000417665 MTHFSP49914 203 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 SATB1Q01826 763 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 TYRO3Q06418 890 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 TXNRD1Q16881 649 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 LEKR1Q6ZMV7 388 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 PPM1EQ8WY54 764 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 DRC1Q96MC2 740 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 NRBP1Q9UHY1 535 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 MRVI1Q9Y6F6 885 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 UTRNP46939 3433 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 NSD3Q9BZ95 1437 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 CEP350Q5VT06 3117 aa6.94□□□□□ -1.3
NPHP1-204ENST00000417665 MINK1Q8N4C8 1332 aaPredicted RBP6.94□□□□□ -1.3
NPHP1-204ENST00000417665 WNK3Q9BYP7 1800 aa6.93□□□□□ -1.3
NPHP1-204ENST00000417665 F13A1P00488 732 aa6.93□□□□□ -1.3
NPHP1-204ENST00000417665 GSCP56915 257 aaPredicted RBP6.93□□□□□ -1.3
NPHP1-204ENST00000417665 ERCC6LQ2NKX8 1250 aa6.93□□□□□ -1.3
NPHP1-204ENST00000417665 ARHGAP29Q52LW3 1261 aa6.93□□□□□ -1.3
NPHP1-204ENST00000417665 NUTM2GQ5VZR2 741 aa6.93□□□□□ -1.3
NPHP1-204ENST00000417665 MED4Q9NPJ6 270 aa6.93□□□□□ -1.3
NPHP1-204ENST00000417665 TOMM22Q9NS69 142 aa6.93□□□□□ -1.3
NPHP1-204ENST00000417665 TRIM35Q9UPQ4 493 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms