RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
HDLBP-206ENST00000417540 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-206ENST00000417540 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
HDLBP-206ENST00000417540 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
HDLBP-206ENST00000417540 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
HDLBP-206ENST00000417540 IARSP41252 1262 aaKnown RBP13.12□□□□□ -0.31
HDLBP-206ENST00000417540 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
HDLBP-206ENST00000417540 ZBTB38Q8NAP3 1195 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-206ENST00000417540 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
HDLBP-206ENST00000417540 MYH16Q9H6N6 1097 aa13.12□□□□□ -0.31
HDLBP-206ENST00000417540 POTECB2RU33 542 aa13.11□□□□□ -0.31
HDLBP-206ENST00000417540 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-206ENST00000417540 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
HDLBP-206ENST00000417540 PCCAP05165 728 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-206ENST00000417540 AOC3Q16853 763 aa13.11□□□□□ -0.31
HDLBP-206ENST00000417540 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
HDLBP-206ENST00000417540 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 CASP7P55210 303 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 CTSWP56202 376 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 SLFN5Q08AF3 891 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 TRIM28Q13263 835 aaKnown RBP13.1□□□□□ -0.31
HDLBP-206ENST00000417540 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 DNAAF4Q8WXU2 420 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 ARAP2Q8WZ64 1704 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 CDHR2Q9BYE9 1310 aa13.1□□□□□ -0.31
HDLBP-206ENST00000417540 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
HDLBP-206ENST00000417540 APLP1P51693 650 aa13.09□□□□□ -0.31
HDLBP-206ENST00000417540 COL13A1Q5TAT6 717 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-206ENST00000417540 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
HDLBP-206ENST00000417540 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
HDLBP-206ENST00000417540 PSMD1Q99460 953 aa13.09□□□□□ -0.31
HDLBP-206ENST00000417540 GREM2Q9H772 168 aa13.09□□□□□ -0.31
HDLBP-206ENST00000417540 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
HDLBP-206ENST00000417540 E9PSI1 815 aa13.08□□□□□ -0.32
HDLBP-206ENST00000417540 PPIP5K2O43314 1243 aa13.08□□□□□ -0.32
HDLBP-206ENST00000417540 GPSM2P81274 684 aa13.08□□□□□ -0.32
HDLBP-206ENST00000417540 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
HDLBP-206ENST00000417540 MRPL50Q8N5N7 158 aaKnown RBP13.08□□□□□ -0.32
HDLBP-206ENST00000417540 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.32
HDLBP-206ENST00000417540 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-206ENST00000417540 TOMM70O94826 608 aa13.07□□□□□ -0.32
HDLBP-206ENST00000417540 GCKRQ14397 625 aa13.07□□□□□ -0.32
HDLBP-206ENST00000417540 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
HDLBP-206ENST00000417540 RTKN2Q8IZC4 609 aa13.07□□□□□ -0.32
HDLBP-206ENST00000417540 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
HDLBP-206ENST00000417540 YDJCA8MPS7 323 aa13.06□□□□□ -0.32
HDLBP-206ENST00000417540 PDE8AO60658 829 aa13.06□□□□□ -0.32
HDLBP-206ENST00000417540 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
HDLBP-206ENST00000417540 DPP8Q6V1X1 898 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-206ENST00000417540 LARGE2Q8N3Y3 721 aa13.06□□□□□ -0.32
HDLBP-206ENST00000417540 TNNQ9UQP3 1299 aa13.06□□□□□ -0.32
HDLBP-206ENST00000417540 FZD9O00144 591 aa13.05□□□□□ -0.32
HDLBP-206ENST00000417540 CAPN15O75808 1086 aa13.05□□□□□ -0.32
HDLBP-206ENST00000417540 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
HDLBP-206ENST00000417540 SLC4A10Q6U841 1118 aa13.05□□□□□ -0.32
HDLBP-206ENST00000417540 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
HDLBP-206ENST00000417540 POLLQ9UGP5 575 aa13.05□□□□□ -0.32
HDLBP-206ENST00000417540 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
HDLBP-206ENST00000417540 KLRK1P26718 216 aa13.04□□□□□ -0.32
HDLBP-206ENST00000417540 SCNN1DP51172 638 aa13.04□□□□□ -0.32
HDLBP-206ENST00000417540 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
HDLBP-206ENST00000417540 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
HDLBP-206ENST00000417540 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-206ENST00000417540 DBNDD1Q9H9R9 158 aa13.04□□□□□ -0.32
HDLBP-206ENST00000417540 GJA3Q9Y6H8 435 aa13.04□□□□□ -0.32
HDLBP-206ENST00000417540 MYH13Q9UKX3 1938 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 H7C1W4 665 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 HNRNPUQ00839 825 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■□□□□ 8.9
HDLBP-206ENST00000417540 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 SP8Q8IXZ3 490 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 NIM1KQ8IY84 436 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 MPNDQ8N594 471 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 SUCLG2Q96I99 432 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 L3MBTL3Q96JM7 780 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-206ENST00000417540 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 TRPM7Q96QT4 1865 aa13.03□□□□□ -0.32
HDLBP-206ENST00000417540 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
HDLBP-206ENST00000417540 UFL1O94874 794 aa13.02□□□□□ -0.33
HDLBP-206ENST00000417540 KIAA2012Q0VF49 1180 aa13.02□□□□□ -0.33
HDLBP-206ENST00000417540 CC2D2BQ6DHV5 1058 aa13.02□□□□□ -0.33
HDLBP-206ENST00000417540 RBM46Q8TBY0 533 aaKnown RBP13.02□□□□□ -0.33
HDLBP-206ENST00000417540 SNAP23O00161 211 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 RAD17O75943 681 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 FOXO4P98177 505 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 KAZALD1Q96I82 304 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 PLA2G12BQ9BX93 195 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-206ENST00000417540 KCNQ5Q9NR82 932 aa13.01□□□□□ -0.33
HDLBP-206ENST00000417540 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
HDLBP-206ENST00000417540 THSD7BQ9C0I4 1608 aa13□□□□□ -0.33
HDLBP-206ENST00000417540 GRM8O00222 908 aa13□□□□□ -0.33
HDLBP-206ENST00000417540 BBOX1O75936 387 aa13□□□□□ -0.33
HDLBP-206ENST00000417540 NBPF7P0C2Y1 421 aaPredicted RBP13□□□□□ -0.33
HDLBP-206ENST00000417540 ITGA6P23229 1130 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms