RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 VPS33BQ9H267 617 aa20.94■□□□□ 0.94
DDR1-231ENST00000417521 ANKRD36CQ5JPF3 1778 aa20.94■□□□□ 0.94
DDR1-231ENST00000417521 FZD9O00144 591 aa20.94■□□□□ 0.94
DDR1-231ENST00000417521 SLC51AQ86UW1 340 aa20.94■□□□□ 0.94
DDR1-231ENST00000417521 PDE8AO60658 829 aa20.93■□□□□ 0.94
DDR1-231ENST00000417521 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
DDR1-231ENST00000417521 FSTL1Q12841 308 aa20.93■□□□□ 0.94
DDR1-231ENST00000417521 FKBP5Q13451 457 aaPredicted RBP20.93■□□□□ 0.94
DDR1-231ENST00000417521 SUPT20HQ8NEM7 779 aa20.93■□□□□ 0.94
DDR1-231ENST00000417521 RTFDC1Q9BY42 306 aaPredicted RBP20.93■□□□□ 0.94
DDR1-231ENST00000417521 MPNDQ8N594 471 aa20.92■□□□□ 0.94
DDR1-231ENST00000417521 CDHR2Q9BYE9 1310 aa20.91■□□□□ 0.94
DDR1-231ENST00000417521 NEURL1BA8MQ27 555 aa20.91■□□□□ 0.94
DDR1-231ENST00000417521 E9PSI1 815 aa20.91■□□□□ 0.94
DDR1-231ENST00000417521 DPP8Q6V1X1 898 aaPredicted RBP20.91■□□□□ 0.94
DDR1-231ENST00000417521 LARGE2Q8N3Y3 721 aa20.91■□□□□ 0.94
DDR1-231ENST00000417521 DNAAF4Q8WXU2 420 aa20.91■□□□□ 0.94
DDR1-231ENST00000417521 CELF1Q92879 486 aaKnown RBP20.91■□□□□ 0.94
DDR1-231ENST00000417521 L3MBTL3Q96JM7 780 aaPredicted RBP20.91■□□□□ 0.94
DDR1-231ENST00000417521 CWF19L2Q2TBE0 894 aaKnown RBP20.9■□□□□ 0.94
DDR1-231ENST00000417521 CCDC152Q4G0S7 254 aa20.9■□□□□ 0.94
DDR1-231ENST00000417521 JARID2Q92833 1246 aaPredicted RBP20.9■□□□□ 0.94
DDR1-231ENST00000417521 RPS8P62241 208 aaKnown RBP20.89■□□□□ 0.94
DDR1-231ENST00000417521 SMC1BQ8NDV3 1235 aa20.89■□□□□ 0.94
DDR1-231ENST00000417521 ZNF541Q9H0D2 1346 aa20.89■□□□□ 0.93
DDR1-231ENST00000417521 IQCA1LA6NCM1 817 aa20.88■□□□□ 0.93
DDR1-231ENST00000417521 PPIP5K2O43314 1243 aa20.88■□□□□ 0.93
DDR1-231ENST00000417521 EIF6P56537 245 aaKnown RBP20.88■□□□□ 0.93
DDR1-231ENST00000417521 LINS1Q8NG48 757 aa20.88■□□□□ 0.93
DDR1-231ENST00000417521 H7C1W4 665 aa20.88■□□□□ 0.93
DDR1-231ENST00000417521 GPC2Q8N158 579 aa20.88■□□□□ 0.93
DDR1-231ENST00000417521 SLFN5Q08AF3 891 aa20.87■□□□□ 0.93
DDR1-231ENST00000417521 CACNA1SQ13698 1873 aa20.87■□□□□ 0.93
DDR1-231ENST00000417521 GCKRQ14397 625 aa20.87■□□□□ 0.93
DDR1-231ENST00000417521 AOC3Q16853 763 aa20.87■□□□□ 0.93
DDR1-231ENST00000417521 TIAM2Q8IVF5 1701 aa20.87■□□□□ 0.93
DDR1-231ENST00000417521 NIM1KQ8IY84 436 aa20.87■□□□□ 0.93
DDR1-231ENST00000417521 SEC31BQ9NQW1 1179 aa20.87■□□□□ 0.93
DDR1-231ENST00000417521 KIAA2012Q0VF49 1180 aa20.86■□□□□ 0.93
DDR1-231ENST00000417521 APLP1P51693 650 aa20.85■□□□□ 0.93
DDR1-231ENST00000417521 CTSWP56202 376 aa20.85■□□□□ 0.93
DDR1-231ENST00000417521 NSFL1CQ9UNZ2 370 aaKnown RBP20.85■□□□□ 0.93
DDR1-231ENST00000417521 WDR90Q96KV7 1748 aa20.85■□□□□ 0.93
DDR1-231ENST00000417521 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
DDR1-231ENST00000417521 TTLL11Q8NHH1 800 aa20.84■□□□□ 0.93
DDR1-231ENST00000417521 ZNRF3Q9ULT6 936 aa20.84■□□□□ 0.93
DDR1-231ENST00000417521 DICER1Q9UPY3 1922 aaKnown RBP20.83■□□□□ 0.93
DDR1-231ENST00000417521 BEND3Q5T5X7 828 aa20.83■□□□□ 0.93
DDR1-231ENST00000417521 PLA2G12BQ9BX93 195 aa20.83■□□□□ 0.93
DDR1-231ENST00000417521 TAF1DQ9H5J8 278 aaPredicted RBP20.83■□□□□ 0.93
DDR1-231ENST00000417521 HACL1Q9UJ83 578 aa20.83■□□□□ 0.93
DDR1-231ENST00000417521 F6X3S4 739 aa20.82■□□□□ 0.92
DDR1-231ENST00000417521 CAPN15O75808 1086 aa20.82■□□□□ 0.92
DDR1-231ENST00000417521 CDCA7LQ96GN5 454 aa20.82■□□□□ 0.92
DDR1-231ENST00000417521 CCDC85AQ96PX6 553 aaPredicted RBP20.82■□□□□ 0.92
DDR1-231ENST00000417521 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
DDR1-231ENST00000417521 CCDC88AQ3V6T2 1871 aa20.82■□□□□ 0.92
DDR1-231ENST00000417521 COL4A5P29400 1685 aa20.82■□□□□ 0.92
DDR1-231ENST00000417521 DDX60Q8IY21 1712 aaKnown RBP20.82■□□□□ 0.92
DDR1-231ENST00000417521 CASP7P55210 303 aa20.81■□□□□ 0.92
DDR1-231ENST00000417521 GPSM2P81274 684 aa20.81■□□□□ 0.92
DDR1-231ENST00000417521 WASHC4Q2M389 1173 aa20.81■□□□□ 0.92
DDR1-231ENST00000417521 ANKRD18AQ8IVF6 992 aa20.81■□□□□ 0.92
DDR1-231ENST00000417521 TRMT2AQ8IZ69 625 aaKnown RBP20.81■□□□□ 0.92
DDR1-231ENST00000417521 CDC5LQ99459 802 aaKnown RBP20.81■□□□□ 0.92
DDR1-231ENST00000417521 GJA3Q9Y6H8 435 aa20.81■□□□□ 0.92
DDR1-231ENST00000417521 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
DDR1-231ENST00000417521 POLLQ9UGP5 575 aa20.81■□□□□ 0.92
DDR1-231ENST00000417521 LAMB2P55268 1798 aa20.8■□□□□ 0.92
DDR1-231ENST00000417521 RTL9Q8NET4 1388 aa20.8■□□□□ 0.92
DDR1-231ENST00000417521 C6orf229H3BNL8 230 aa20.8■□□□□ 0.92
DDR1-231ENST00000417521 EPHX2P34913 555 aa20.8■□□□□ 0.92
DDR1-231ENST00000417521 CHADLQ6NUI6 762 aa20.8■□□□□ 0.92
DDR1-231ENST00000417521 PNMA8AQ86V59 439 aaPredicted RBP20.8■□□□□ 0.92
DDR1-231ENST00000417521 EYA3Q99504 573 aa20.8■□□□□ 0.92
DDR1-231ENST00000417521 CSF1RP07333 972 aa20.79■□□□□ 0.92
DDR1-231ENST00000417521 CXCL9Q07325 125 aa20.79■□□□□ 0.92
DDR1-231ENST00000417521 LDHDQ86WU2 507 aa20.79■□□□□ 0.92
DDR1-231ENST00000417521 MRPL50Q8N5N7 158 aaKnown RBP20.79■□□□□ 0.92
DDR1-231ENST00000417521 TBC1D16Q8TBP0 767 aa20.79■□□□□ 0.92
DDR1-231ENST00000417521 GREM2Q9H772 168 aa20.79■□□□□ 0.92
DDR1-231ENST00000417521 ZBED9Q6R2W3 1325 aa20.79■□□□□ 0.92
DDR1-231ENST00000417521 POTEIP0CG38 1075 aa20.78■□□□□ 0.92
DDR1-231ENST00000417521 POTEJP0CG39 1038 aa20.78■□□□□ 0.92
DDR1-231ENST00000417521 BSDC1Q9NW68 430 aaPredicted RBP20.78■□□□□ 0.92
DDR1-231ENST00000417521 ANKIB1Q9P2G1 1089 aa20.78■□□□□ 0.92
DDR1-231ENST00000417521 ALDH1L1O75891 902 aa20.77■□□□□ 0.92
DDR1-231ENST00000417521 LMOD1P29536 600 aaPredicted RBP20.77■□□□□ 0.92
DDR1-231ENST00000417521 SCNN1DP51172 638 aa20.77■□□□□ 0.92
DDR1-231ENST00000417521 TNIP1Q15025 636 aa20.77■□□□□ 0.92
DDR1-231ENST00000417521 CIAPIN1Q6FI81 312 aa20.77■□□□□ 0.92
DDR1-231ENST00000417521 CT47B1P0C2W7 299 aaPredicted RBP20.76■□□□□ 0.91
DDR1-231ENST00000417521 ALDH1L2Q3SY69 923 aa20.76■□□□□ 0.91
DDR1-231ENST00000417521 SSH1Q8WYL5 1049 aa20.76■□□□□ 0.91
DDR1-231ENST00000417521 ZC3H12CQ9C0D7 883 aaKnown RBP20.76■□□□□ 0.91
DDR1-231ENST00000417521 SRCIN1Q9C0H9 1055 aa20.76■□□□□ 0.91
DDR1-231ENST00000417521 GGA1Q9UJY5 639 aa20.76■□□□□ 0.91
DDR1-231ENST00000417521 EAPPQ56P03 285 aaPredicted RBP20.75■□□□□ 0.91
DDR1-231ENST00000417521 SLC4A10Q6U841 1118 aa20.75■□□□□ 0.91
DDR1-231ENST00000417521 PTPRCP08575 1304 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms