RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 MED23Q9ULK4 1368 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 CHRNA2Q15822 529 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 ARID3AQ99856 593 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 DBNDD2Q9BQY9 259 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 KDM6AO15550 1401 aaPredicted RBP17.23■□□□□ 0.35
HDAC9-208ENST00000417496 TERF1P54274 439 aa17.22■□□□□ 0.35
HDAC9-208ENST00000417496 KRT85P78386 507 aa17.22■□□□□ 0.35
HDAC9-208ENST00000417496 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
HDAC9-208ENST00000417496 DDX46Q7L014 1031 aaKnown RBP17.22■□□□□ 0.35
HDAC9-208ENST00000417496 SPC24Q8NBT2 197 aa17.22■□□□□ 0.35
HDAC9-208ENST00000417496 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
HDAC9-208ENST00000417496 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
HDAC9-208ENST00000417496 RFX5P48382 616 aaPredicted RBP17.22■□□□□ 0.35
HDAC9-208ENST00000417496 LRP10Q7Z4F1 713 aa17.22■□□□□ 0.35
HDAC9-208ENST00000417496 PROSER2Q86WR7 435 aaPredicted RBP17.22■□□□□ 0.35
HDAC9-208ENST00000417496 A0A087WZG4 1122 aa17.21■□□□□ 0.35
HDAC9-208ENST00000417496 PPFIA3O75145 1194 aa17.21■□□□□ 0.35
HDAC9-208ENST00000417496 TSC1Q92574 1164 aa17.21■□□□□ 0.35
HDAC9-208ENST00000417496 PDCL3Q9H2J4 239 aa17.21■□□□□ 0.35
HDAC9-208ENST00000417496 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.34
HDAC9-208ENST00000417496 DACT1Q9NYF0 836 aa17.2■□□□□ 0.34
HDAC9-208ENST00000417496 OVOS2A0A0G2JMS6 1433 aa17.2■□□□□ 0.34
HDAC9-208ENST00000417496 CYP27B1O15528 508 aa17.2■□□□□ 0.34
HDAC9-208ENST00000417496 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
HDAC9-208ENST00000417496 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
HDAC9-208ENST00000417496 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
HDAC9-208ENST00000417496 COPRSQ9NQ92 184 aa17.2■□□□□ 0.34
HDAC9-208ENST00000417496 ATP5JP18859 108 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 FOSBP53539 338 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 ANKRD1Q15327 319 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 LUZP1Q86V48 1076 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 CYP21A2P08686 494 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
HDAC9-208ENST00000417496 CCDC192P0DO97 292 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 SPATA32Q96LK8 384 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 SLIT3O75094 1523 aa17.19■□□□□ 0.34
HDAC9-208ENST00000417496 PDCP20941 246 aa17.18■□□□□ 0.34
HDAC9-208ENST00000417496 LMBR1LQ6UX01 489 aa17.18■□□□□ 0.34
HDAC9-208ENST00000417496 Q6ZUG5 572 aa17.18■□□□□ 0.34
HDAC9-208ENST00000417496 NEK1Q96PY6 1258 aa17.18■□□□□ 0.34
HDAC9-208ENST00000417496 A0A0G2JLW4 131 aa17.18■□□□□ 0.34
HDAC9-208ENST00000417496 GOLGA6L4A6NEF3 574 aa17.18■□□□□ 0.34
HDAC9-208ENST00000417496 HSP90B1P14625 803 aaKnown RBP17.18■□□□□ 0.34
HDAC9-208ENST00000417496 CEBPZQ03701 1054 aaKnown RBP17.18■□□□□ 0.34
HDAC9-208ENST00000417496 IFNL2Q8IZJ0 200 aa17.18■□□□□ 0.34
HDAC9-208ENST00000417496 NUP62CLQ9H1M0 184 aa17.18■□□□□ 0.34
HDAC9-208ENST00000417496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.17■□□□□ 0.34
HDAC9-208ENST00000417496 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 LEO1Q8WVC0 666 aaPredicted RBP17.17■□□□□ 0.34
HDAC9-208ENST00000417496 NEUROD6Q96NK8 337 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 ZNF609O15014 1411 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
HDAC9-208ENST00000417496 RGPD5Q99666 1765 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 FAM177BA6PVY3 158 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 TIMM10P62072 90 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 MAP3K11Q16584 847 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 GLIPR1L2Q4G1C9 344 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 BRF1Q92994 677 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 KCNF1Q9H3M0 494 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 HMG20BQ9P0W2 317 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 MEGF6O75095 1541 aa17.17■□□□□ 0.34
HDAC9-208ENST00000417496 NR1I2O75469 434 aa17.16■□□□□ 0.34
HDAC9-208ENST00000417496 TYRO3Q06418 890 aa17.16■□□□□ 0.34
HDAC9-208ENST00000417496 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
HDAC9-208ENST00000417496 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
HDAC9-208ENST00000417496 GTF3C6Q969F1 213 aa17.16■□□□□ 0.34
HDAC9-208ENST00000417496 PGBD1Q96JS3 809 aa17.16■□□□□ 0.34
HDAC9-208ENST00000417496 TNMDQ9H2S6 317 aa17.16■□□□□ 0.34
HDAC9-208ENST00000417496 PYCARDQ9ULZ3 195 aa17.16■□□□□ 0.34
HDAC9-208ENST00000417496 GOLIM4O00461 696 aa17.15■□□□□ 0.34
HDAC9-208ENST00000417496 FGD1P98174 961 aa17.15■□□□□ 0.34
HDAC9-208ENST00000417496 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
HDAC9-208ENST00000417496 MCMDC2Q4G0Z9 681 aa17.15■□□□□ 0.34
HDAC9-208ENST00000417496 FMNL2Q96PY5 1086 aa17.15■□□□□ 0.34
HDAC9-208ENST00000417496 C5P01031 1676 aa17.15■□□□□ 0.34
HDAC9-208ENST00000417496 CABP4P57796 275 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 SCRN1Q12765 414 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 ANO6Q4KMQ2 910 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 HAUS7Q99871 368 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
HDAC9-208ENST00000417496 SCAND2PQ9GZW5 306 aaPredicted RBP17.14■□□□□ 0.33
HDAC9-208ENST00000417496 ELP1O95163 1332 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
HDAC9-208ENST00000417496 CHST3Q7LGC8 479 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 ALDH8A1Q9H2A2 487 aaPredicted RBP17.14■□□□□ 0.33
HDAC9-208ENST00000417496 JCADQ9P266 1359 aa17.14■□□□□ 0.33
HDAC9-208ENST00000417496 TTLL7Q6ZT98 887 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 FAM200AQ8TCP9 573 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
HDAC9-208ENST00000417496 C19orf44Q9H6X5 657 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 C1orf167Q5SNV9 1468 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms