RNA–Protein interactions for RNA: ENST00000417107.5

HDAC7-204, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-204ENST00000417107 EAPPQ56P03 285 aaPredicted RBP23.1■■□□□ 1.29
HDAC7-204ENST00000417107 KSR2Q6VAB6 950 aa23.1■■□□□ 1.29
HDAC7-204ENST00000417107 G2E3Q7L622 706 aa23.1■■□□□ 1.29
HDAC7-204ENST00000417107 FAM89AQ96GI7 184 aa23.1■■□□□ 1.29
HDAC7-204ENST00000417107 HACL1Q9UJ83 578 aa23.1■■□□□ 1.29
HDAC7-204ENST00000417107 GJA3Q9Y6H8 435 aa23.1■■□□□ 1.29
HDAC7-204ENST00000417107 EIF6P56537 245 aaKnown RBP23.09■■□□□ 1.29
HDAC7-204ENST00000417107 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.293e-6■□□□□ 11.1
HDAC7-204ENST00000417107 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
HDAC7-204ENST00000417107 DDX46Q7L014 1031 aaKnown RBP23.09■■□□□ 1.29
HDAC7-204ENST00000417107 LDHDQ86WU2 507 aa23.09■■□□□ 1.29
HDAC7-204ENST00000417107 GPC2Q8N158 579 aa23.09■■□□□ 1.29
HDAC7-204ENST00000417107 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
HDAC7-204ENST00000417107 LAMB2P55268 1798 aa23.09■■□□□ 1.29
HDAC7-204ENST00000417107 PI4KAP2A4QPH2 592 aa23.08■■□□□ 1.29
HDAC7-204ENST00000417107 PPIP5K2O43314 1243 aa23.08■■□□□ 1.29
HDAC7-204ENST00000417107 BBOX1O75936 387 aa23.08■■□□□ 1.29
HDAC7-204ENST00000417107 EPHX2P34913 555 aa23.08■■□□□ 1.29
HDAC7-204ENST00000417107 AOC3Q16853 763 aa23.08■■□□□ 1.29
HDAC7-204ENST00000417107 PI4KAP1Q8N8J0 262 aa23.08■■□□□ 1.29
HDAC7-204ENST00000417107 JMYQ8N9B5 988 aa23.08■■□□□ 1.29
HDAC7-204ENST00000417107 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.29
HDAC7-204ENST00000417107 FLIIQ13045 1269 aa23.07■■□□□ 1.28
HDAC7-204ENST00000417107 MYD88Q99836 296 aa23.07■■□□□ 1.28
HDAC7-204ENST00000417107 MAP3K2Q9Y2U5 619 aa23.07■■□□□ 1.28
HDAC7-204ENST00000417107 SCN4AP35499 1836 aa23.07■■□□□ 1.28
HDAC7-204ENST00000417107 GRAPQ13588 217 aa23.06■■□□□ 1.28
HDAC7-204ENST00000417107 SP8Q8IXZ3 490 aa23.06■■□□□ 1.28
HDAC7-204ENST00000417107 NIM1KQ8IY84 436 aa23.06■■□□□ 1.28
HDAC7-204ENST00000417107 GRAPLQ8TC17 118 aaPredicted RBP23.06■■□□□ 1.28
HDAC7-204ENST00000417107 CLEC11AQ9Y240 323 aa23.06■■□□□ 1.28
HDAC7-204ENST00000417107 DPP8Q6V1X1 898 aaPredicted RBP23.05■■□□□ 1.28
HDAC7-204ENST00000417107 NEXNQ0ZGT2 675 aa23.04■■□□□ 1.28
HDAC7-204ENST00000417107 FKBP5Q13451 457 aaPredicted RBP23.04■■□□□ 1.28
HDAC7-204ENST00000417107 MPNDQ8N594 471 aa23.04■■□□□ 1.28
HDAC7-204ENST00000417107 CCDC191Q8NCU4 936 aa23.04■■□□□ 1.28
HDAC7-204ENST00000417107 RTFDC1Q9BY42 306 aaPredicted RBP23.04■■□□□ 1.28
HDAC7-204ENST00000417107 DDX60Q8IY21 1712 aaKnown RBP23.02■■□□□ 1.28
HDAC7-204ENST00000417107 CT47B1P0C2W7 299 aaPredicted RBP23.02■■□□□ 1.28
HDAC7-204ENST00000417107 PNMA8AQ86V59 439 aaPredicted RBP23.02■■□□□ 1.28
HDAC7-204ENST00000417107 SUPT20HQ8NEM7 779 aa23.02■■□□□ 1.28
HDAC7-204ENST00000417107 TAF1P21675 1872 aa23.02■■□□□ 1.28
HDAC7-204ENST00000417107 PASKQ96RG2 1323 aa23.02■■□□□ 1.28
HDAC7-204ENST00000417107 PCNTO95613 3336 aa23.01■■□□□ 1.27
HDAC7-204ENST00000417107 IRS4O14654 1257 aaPredicted RBP23.01■■□□□ 1.27
HDAC7-204ENST00000417107 ITGBL1O95965 494 aaPredicted RBP23.01■■□□□ 1.27
HDAC7-204ENST00000417107 EPS15P42566 896 aa23.01■■□□□ 1.27
HDAC7-204ENST00000417107 SCNN1DP51172 638 aa23.01■■□□□ 1.27
HDAC7-204ENST00000417107 SF3B3Q15393 1217 aaKnown RBP23.01■■□□□ 1.27
HDAC7-204ENST00000417107 IFFO2Q5TF58 517 aa23.01■■□□□ 1.27
HDAC7-204ENST00000417107 MAP1SQ66K74 1059 aaPredicted RBP23.01■■□□□ 1.27
HDAC7-204ENST00000417107 CELF1Q92879 486 aaKnown RBP23.01■■□□□ 1.27
HDAC7-204ENST00000417107 CREBZFQ9NS37 354 aa23.01■■□□□ 1.27
HDAC7-204ENST00000417107 CWC25Q9NXE8 425 aaPredicted RBP23.01■■□□□ 1.27
HDAC7-204ENST00000417107 LTBP1Q14766 1721 aa23■■□□□ 1.27
HDAC7-204ENST00000417107 LMOD1P29536 600 aaPredicted RBP23■■□□□ 1.27
HDAC7-204ENST00000417107 ZBTB38Q8NAP3 1195 aaPredicted RBP23■■□□□ 1.27
HDAC7-204ENST00000417107 DNAAF4Q8WXU2 420 aa23■■□□□ 1.27
HDAC7-204ENST00000417107 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
HDAC7-204ENST00000417107 VPS33BQ9H267 617 aa23■■□□□ 1.27
HDAC7-204ENST00000417107 MKRN1Q9UHC7 482 aaKnown RBP23■■□□□ 1.27
HDAC7-204ENST00000417107 ZNRF3Q9ULT6 936 aa23■■□□□ 1.27
HDAC7-204ENST00000417107 COL4A1P02462 1669 aa23■■□□□ 1.27
HDAC7-204ENST00000417107 ADAMTSL1Q8N6G6 1762 aa22.99■■□□□ 1.27
HDAC7-204ENST00000417107 CXCL9Q07325 125 aa22.99■■□□□ 1.27
HDAC7-204ENST00000417107 MRPL50Q8N5N7 158 aaKnown RBP22.99■■□□□ 1.27
HDAC7-204ENST00000417107 IGKV5-2P06315 115 aa22.98■■□□□ 1.27
HDAC7-204ENST00000417107 HSP90B1P14625 803 aaKnown RBP22.98■■□□□ 1.27
HDAC7-204ENST00000417107 KIAA2012Q0VF49 1180 aa22.98■■□□□ 1.27
HDAC7-204ENST00000417107 ALDH1L2Q3SY69 923 aa22.98■■□□□ 1.27
HDAC7-204ENST00000417107 CNTROBQ8N137 903 aa22.98■■□□□ 1.27
HDAC7-204ENST00000417107 SSH1Q8WYL5 1049 aa22.98■■□□□ 1.27
HDAC7-204ENST00000417107 PCCAP05165 728 aaPredicted RBP22.97■■□□□ 1.27
HDAC7-204ENST00000417107 TMC4Q7Z404 712 aa22.97■■□□□ 1.27
HDAC7-204ENST00000417107 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
HDAC7-204ENST00000417107 DUOX1Q9NRD9 1551 aa22.96■■□□□ 1.27
HDAC7-204ENST00000417107 NEURL1BA8MQ27 555 aa22.95■■□□□ 1.26
HDAC7-204ENST00000417107 F6X3S4 739 aa22.95■■□□□ 1.26
HDAC7-204ENST00000417107 RAD17O75943 681 aa22.95■■□□□ 1.26
HDAC7-204ENST00000417107 GPSM2P81274 684 aa22.95■■□□□ 1.26
HDAC7-204ENST00000417107 CWF19L2Q2TBE0 894 aaKnown RBP22.95■■□□□ 1.26
HDAC7-204ENST00000417107 LINS1Q8NG48 757 aa22.95■■□□□ 1.26
HDAC7-204ENST00000417107 ZBED9Q6R2W3 1325 aa22.94■■□□□ 1.26
HDAC7-204ENST00000417107 TMEM88BA6NKF7 163 aa22.94■■□□□ 1.26
HDAC7-204ENST00000417107 GMPSP49915 693 aaPredicted RBP22.94■■□□□ 1.26
HDAC7-204ENST00000417107 SEC31BQ9NQW1 1179 aa22.94■■□□□ 1.26
HDAC7-204ENST00000417107 GPRC5DQ9NZD1 345 aa22.94■■□□□ 1.26
HDAC7-204ENST00000417107 LRRC37AA6NMS7 1700 aa22.94■■□□□ 1.26
HDAC7-204ENST00000417107 CACNA1FO60840 1977 aa22.93■■□□□ 1.26
HDAC7-204ENST00000417107 HSPA1AP0DMV8 641 aaKnown RBP22.93■■□□□ 1.26
HDAC7-204ENST00000417107 HSPA1BP0DMV9 641 aaKnown RBP22.93■■□□□ 1.26
HDAC7-204ENST00000417107 RPS8P62241 208 aaKnown RBP22.93■■□□□ 1.26
HDAC7-204ENST00000417107 FMR1Q06787 632 aaKnown RBP eCLIP22.93■■□□□ 1.26
HDAC7-204ENST00000417107 CIAPIN1Q6FI81 312 aa22.93■■□□□ 1.26
HDAC7-204ENST00000417107 CCDC85AQ96PX6 553 aaPredicted RBP22.93■■□□□ 1.26
HDAC7-204ENST00000417107 YDJCA8MPS7 323 aa22.92■■□□□ 1.26
HDAC7-204ENST00000417107 C6orf229H3BNL8 230 aa22.92■■□□□ 1.26
HDAC7-204ENST00000417107 RIMBP2O15034 1052 aa22.92■■□□□ 1.26
HDAC7-204ENST00000417107 GCKRQ14397 625 aa22.92■■□□□ 1.26
HDAC7-204ENST00000417107 BEND3Q5T5X7 828 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms