RNA–Protein interactions for RNA: ENST00000416889.6

SPG21-202, Transcript of SPG21, maspardin, humanhuman

TSL 2 BASIC

Gene SPG21, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-202ENST00000416889 POLA2Q14181 598 aa28.17■■■□□ 2.1
SPG21-202ENST00000416889 SSH3Q8TE77 659 aa28.17■■■□□ 2.1
SPG21-202ENST00000416889 ATF5Q9Y2D1 282 aaPredicted RBP28.17■■■□□ 2.1
SPG21-202ENST00000416889 IGHDP01880 384 aa28.16■■■□□ 2.1
SPG21-202ENST00000416889 CCDC152Q4G0S7 254 aa28.16■■■□□ 2.1
SPG21-202ENST00000416889 CCDC85AQ96PX6 553 aaPredicted RBP28.16■■■□□ 2.1
SPG21-202ENST00000416889 SOCS7O14512 581 aa28.15■■■□□ 2.1
SPG21-202ENST00000416889 POLD1P28340 1107 aa28.15■■■□□ 2.1
SPG21-202ENST00000416889 TNRC6CQ9HCJ0 1690 aaKnown RBP28.15■■■□□ 2.1
SPG21-202ENST00000416889 FAM161AQ3B820 660 aa28.14■■■□□ 2.1
SPG21-202ENST00000416889 SF3B3Q15393 1217 aaKnown RBP28.13■■■□□ 2.09
SPG21-202ENST00000416889 CCDC57Q2TAC2 916 aa28.13■■■□□ 2.09
SPG21-202ENST00000416889 C3orf67Q6ZVT6 689 aa28.13■■■□□ 2.09
SPG21-202ENST00000416889 GREM2Q9H772 168 aa28.13■■■□□ 2.09
SPG21-202ENST00000416889 IFIT5Q13325 482 aaKnown RBP28.12■■■□□ 2.09
SPG21-202ENST00000416889 BRIP1Q9BX63 1249 aa28.12■■■□□ 2.09
SPG21-202ENST00000416889 RTL9Q8NET4 1388 aa28.11■■■□□ 2.09
SPG21-202ENST00000416889 ITGA6P23229 1130 aa28.11■■■□□ 2.09
SPG21-202ENST00000416889 ANKRD18BA2A2Z9 1011 aa28.1■■■□□ 2.09
SPG21-202ENST00000416889 CENPQQ7L2Z9 268 aaPredicted RBP28.1■■■□□ 2.09
SPG21-202ENST00000416889 ANKRD31Q8N7Z5 1873 aa28.1■■■□□ 2.09
SPG21-202ENST00000416889 RFX5P48382 616 aaPredicted RBP28.09■■■□□ 2.09
SPG21-202ENST00000416889 TAF7LQ5H9L4 462 aa28.09■■■□□ 2.09
SPG21-202ENST00000416889 KDM2BQ8NHM5 1336 aa28.09■■■□□ 2.09
SPG21-202ENST00000416889 DCTPP1Q9H773 170 aa28.08■■■□□ 2.09
SPG21-202ENST00000416889 SURF6O75683 361 aaKnown RBP28.08■■■□□ 2.08
SPG21-202ENST00000416889 PDE6BP35913 854 aa28.08■■■□□ 2.08
SPG21-202ENST00000416889 GCC1Q96CN9 775 aa28.08■■■□□ 2.08
SPG21-202ENST00000416889 COPRSQ9NQ92 184 aa28.08■■■□□ 2.08
SPG21-202ENST00000416889 PA2G4Q9UQ80 394 aaKnown RBP28.08■■■□□ 2.08
SPG21-202ENST00000416889 PTPN12Q05209 780 aaKnown RBP28.07■■■□□ 2.08
SPG21-202ENST00000416889 KLHDC4Q8TBB5 520 aa28.07■■■□□ 2.08
SPG21-202ENST00000416889 RPGRQ92834 1020 aaKnown RBP28.07■■■□□ 2.08
SPG21-202ENST00000416889 C10orf71Q711Q0 1435 aa28.06■■■□□ 2.08
SPG21-202ENST00000416889 SEC31BQ9NQW1 1179 aa28.06■■■□□ 2.08
SPG21-202ENST00000416889 EXOC6BQ9Y2D4 811 aa28.06■■■□□ 2.08
SPG21-202ENST00000416889 KLRG2A4D1S0 409 aaPredicted RBP28.05■■■□□ 2.08
SPG21-202ENST00000416889 CRY2Q49AN0 593 aa28.05■■■□□ 2.08
SPG21-202ENST00000416889 DDX46Q7L014 1031 aaKnown RBP28.05■■■□□ 2.08
SPG21-202ENST00000416889 SMC5Q8IY18 1101 aa28.05■■■□□ 2.08
SPG21-202ENST00000416889 ZNF594Q96JF6 807 aaPredicted RBP28.05■■■□□ 2.08
SPG21-202ENST00000416889 CDC5LQ99459 802 aaKnown RBP28.05■■■□□ 2.08
SPG21-202ENST00000416889 NOP58Q9Y2X3 529 aaKnown RBP28.05■■■□□ 2.08
SPG21-202ENST00000416889 OS9Q13438 667 aaPredicted RBP28.04■■■□□ 2.08
SPG21-202ENST00000416889 HSP90AB4PQ58FF6 505 aa28.04■■■□□ 2.08
SPG21-202ENST00000416889 SGIP1Q9BQI5 828 aa28.04■■■□□ 2.08
SPG21-202ENST00000416889 SIL1Q9H173 461 aa28.04■■■□□ 2.08
SPG21-202ENST00000416889 G3BP1Q13283 466 aaKnown RBP eCLIP28.03■■■□□ 2.08
SPG21-202ENST00000416889 SPON1Q9HCB6 807 aa28.03■■■□□ 2.08
SPG21-202ENST00000416889 IGHMBP2P38935 993 aaKnown RBP28.02■■■□□ 2.08
SPG21-202ENST00000416889 PTGER2P43116 358 aa28.02■■■□□ 2.08
SPG21-202ENST00000416889 RBM17Q96I25 401 aaKnown RBP28.02■■■□□ 2.08
SPG21-202ENST00000416889 PDZRN3Q9UPQ7 1066 aa28.02■■■□□ 2.08
SPG21-202ENST00000416889 RAB11FIP3O75154 756 aa28.01■■■□□ 2.07
SPG21-202ENST00000416889 ANKRD18AQ8IVF6 992 aa28.01■■■□□ 2.07
SPG21-202ENST00000416889 FBXO3Q9UK99 471 aa28.01■■■□□ 2.07
SPG21-202ENST00000416889 APBB1O00213 710 aa28■■■□□ 2.07
SPG21-202ENST00000416889 C2CD5Q86YS7 1000 aa28■■■□□ 2.07
SPG21-202ENST00000416889 MPHOSPH8Q99549 860 aa28■■■□□ 2.07
SPG21-202ENST00000416889 LRP5O75197 1615 aa28■■■□□ 2.07
SPG21-202ENST00000416889 COL11A2P13942 1736 aaPredicted RBP27.99■■■□□ 2.07
SPG21-202ENST00000416889 H0YIN7 160 aa27.99■■■□□ 2.07
SPG21-202ENST00000416889 EYA2O00167 538 aa27.99■■■□□ 2.07
SPG21-202ENST00000416889 SRGNP10124 158 aa27.99■■■□□ 2.07
SPG21-202ENST00000416889 NPR1P16066 1061 aa27.99■■■□□ 2.07
SPG21-202ENST00000416889 HOXA10P31260 410 aaPredicted RBP27.99■■■□□ 2.07
SPG21-202ENST00000416889 LDHAL6AQ6ZMR3 332 aa27.99■■■□□ 2.07
SPG21-202ENST00000416889 ERC1Q8IUD2 1116 aa27.99■■■□□ 2.07
SPG21-202ENST00000416889 SPEF2Q9C093 1822 aa27.98■■■□□ 2.07
SPG21-202ENST00000416889 KIF13BQ9NQT8 1826 aa27.98■■■□□ 2.07
SPG21-202ENST00000416889 CIAO1O76071 339 aa27.98■■■□□ 2.07
SPG21-202ENST00000416889 GRAPQ13588 217 aa27.98■■■□□ 2.07
SPG21-202ENST00000416889 GRAPLQ8TC17 118 aaPredicted RBP27.98■■■□□ 2.07
SPG21-202ENST00000416889 CELF1Q92879 486 aaKnown RBP27.98■■■□□ 2.07
SPG21-202ENST00000416889 CNNM1Q9NRU3 951 aa27.98■■■□□ 2.07
SPG21-202ENST00000416889 ZBTB47Q9UFB7 747 aaPredicted RBP27.98■■■□□ 2.07
SPG21-202ENST00000416889 TAF1P21675 1872 aa27.98■■■□□ 2.07
SPG21-202ENST00000416889 ANKRD45Q5TZF3 282 aa27.97■■■□□ 2.07
SPG21-202ENST00000416889 MASTLQ96GX5 879 aa27.97■■■□□ 2.07
SPG21-202ENST00000416889 PUS3Q9BZE2 481 aaKnown RBP27.97■■■□□ 2.07
SPG21-202ENST00000416889 IL15P40933 162 aaPredicted RBP27.97■■■□□ 2.07
SPG21-202ENST00000416889 RPS8P62241 208 aaKnown RBP27.97■■■□□ 2.07
SPG21-202ENST00000416889 LRRC24Q50LG9 513 aa27.97■■■□□ 2.07
SPG21-202ENST00000416889 KIF1BPQ96EK5 621 aa27.97■■■□□ 2.07
SPG21-202ENST00000416889 CRAMP1Q96RY5 1269 aa27.97■■■□□ 2.07
SPG21-202ENST00000416889 COL4A1P02462 1669 aa27.96■■■□□ 2.07
SPG21-202ENST00000416889 LRRCC1Q9C099 1032 aa27.96■■■□□ 2.07
SPG21-202ENST00000416889 ATG9AQ7Z3C6 839 aa27.95■■■□□ 2.06
SPG21-202ENST00000416889 CHRNA5P30532 468 aa27.94■■■□□ 2.06
SPG21-202ENST00000416889 STYK1Q6J9G0 422 aa27.94■■■□□ 2.06
SPG21-202ENST00000416889 RHPN1Q8TCX5 695 aa27.94■■■□□ 2.06
SPG21-202ENST00000416889 ZNF622Q969S3 477 aaKnown RBP eCLIP27.94■■■□□ 2.06
SPG21-202ENST00000416889 ALDH1B1P30837 517 aa27.93■■■□□ 2.06
SPG21-202ENST00000416889 NUCB1Q02818 461 aa27.93■■■□□ 2.06
SPG21-202ENST00000416889 KLHL34Q8N239 644 aa27.93■■■□□ 2.06
SPG21-202ENST00000416889 BSDC1Q9NW68 430 aaPredicted RBP27.93■■■□□ 2.06
SPG21-202ENST00000416889 PPP1R1BQ9UD71 204 aaPredicted RBP27.93■■■□□ 2.06
SPG21-202ENST00000416889 RIPOR2Q9Y4F9 1068 aa27.93■■■□□ 2.06
SPG21-202ENST00000416889 SASH1O94885 1247 aa27.92■■■□□ 2.06
SPG21-202ENST00000416889 TGFB2P61812 414 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms