RNA–Protein interactions for RNA: ENST00000416277.5

VWA3B-202, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,827 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-202ENST00000416277 VPS37CA5D8V6 355 aaPredicted RBP16.29■□□□□ 0.2
VWA3B-202ENST00000416277 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
VWA3B-202ENST00000416277 GCKRQ14397 625 aa16.28■□□□□ 0.2
VWA3B-202ENST00000416277 BLOC1S2Q6QNY1 142 aa16.28■□□□□ 0.2
VWA3B-202ENST00000416277 BOLA2Q9H3K6 86 aa16.28■□□□□ 0.2
VWA3B-202ENST00000416277 SIL1Q9H173 461 aa16.28■□□□□ 0.2
VWA3B-202ENST00000416277 SLC52A2Q9HAB3 445 aa16.28■□□□□ 0.2
VWA3B-202ENST00000416277 HMG20BQ9P0W2 317 aa16.28■□□□□ 0.2
VWA3B-202ENST00000416277 NPHP3Q7Z494 1330 aa16.28■□□□□ 0.2
VWA3B-202ENST00000416277 PDCP20941 246 aa16.27■□□□□ 0.2
VWA3B-202ENST00000416277 TSGA10IPQ3SY00 556 aa16.27■□□□□ 0.2
VWA3B-202ENST00000416277 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.2
VWA3B-202ENST00000416277 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
VWA3B-202ENST00000416277 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.2
VWA3B-202ENST00000416277 RFX7Q2KHR2 1363 aa16.27■□□□□ 0.2
VWA3B-202ENST00000416277 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.2
VWA3B-202ENST00000416277 RPS6KB1P23443 525 aa16.27■□□□□ 0.2
VWA3B-202ENST00000416277 ELP1O95163 1332 aa16.27■□□□□ 0.19
VWA3B-202ENST00000416277 COL15A1P39059 1388 aa16.27■□□□□ 0.19
VWA3B-202ENST00000416277 ADCY5O95622 1261 aa16.27■□□□□ 0.19
VWA3B-202ENST00000416277 LARP1BQ659C4 914 aaKnown RBP16.27■□□□□ 0.19
VWA3B-202ENST00000416277 COPRSQ9NQ92 184 aa16.27■□□□□ 0.19
VWA3B-202ENST00000416277 KDM4AO75164 1064 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 KRT85P78386 507 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 KRT28Q7Z3Y7 464 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 SLC39A6Q13433 755 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 EPHA10Q5JZY3 1008 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
VWA3B-202ENST00000416277 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 COL9A3Q14050 684 aaPredicted RBP16.25■□□□□ 0.19
VWA3B-202ENST00000416277 KLHDC4Q8TBB5 520 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 MYD88Q99836 296 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 LAMB4A4D0S4 1761 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 C1orf167Q5SNV9 1468 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 TOB2Q14106 344 aaPredicted RBP16.25■□□□□ 0.19
VWA3B-202ENST00000416277 USPL1Q5W0Q7 1092 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 COPS6Q7L5N1 327 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 ZNF589Q86UQ0 364 aaPredicted RBP16.25■□□□□ 0.19
VWA3B-202ENST00000416277 COL18A1P39060 1754 aa16.25■□□□□ 0.19
VWA3B-202ENST00000416277 DTNBO60941 627 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 MYL6BP14649 208 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 PHKG2P15735 406 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 ATP5JP18859 108 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 SLC20A2Q08357 652 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 LRP10Q7Z4F1 713 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 TTC6Q86TZ1 520 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 PIBF1Q8WXW3 757 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 MEGF6O75095 1541 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 ZBTB22O15209 634 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 TAF5LO75529 589 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 RFX5P48382 616 aaPredicted RBP16.24■□□□□ 0.19
VWA3B-202ENST00000416277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
VWA3B-202ENST00000416277 TAF6LQ9Y6J9 622 aa16.24■□□□□ 0.19
VWA3B-202ENST00000416277 KRT32Q14532 448 aa16.23■□□□□ 0.19
VWA3B-202ENST00000416277 RABL6Q3YEC7 729 aaPredicted RBP16.23■□□□□ 0.19
VWA3B-202ENST00000416277 DBNLQ9UJU6 430 aaKnown RBP16.23■□□□□ 0.19
VWA3B-202ENST00000416277 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
VWA3B-202ENST00000416277 TNNI3KQ59H18 835 aa16.23■□□□□ 0.19
VWA3B-202ENST00000416277 ZNF496Q96IT1 587 aaPredicted RBP16.23■□□□□ 0.19
VWA3B-202ENST00000416277 FPGT-TNNI3KV9GXZ4 949 aa16.23■□□□□ 0.19
VWA3B-202ENST00000416277 GLI3P10071 1580 aa16.22■□□□□ 0.19
VWA3B-202ENST00000416277 CCDC192P0DO97 292 aa16.22■□□□□ 0.19
VWA3B-202ENST00000416277 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
VWA3B-202ENST00000416277 NFATC2IPQ8NCF5 419 aa16.22■□□□□ 0.19
VWA3B-202ENST00000416277 TCEANC2Q96MN5 208 aa16.22■□□□□ 0.19
VWA3B-202ENST00000416277 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
VWA3B-202ENST00000416277 PARP4Q9UKK3 1724 aaKnown RBP16.21■□□□□ 0.19
VWA3B-202ENST00000416277 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
VWA3B-202ENST00000416277 SCAND2PQ9GZW5 306 aaPredicted RBP16.21■□□□□ 0.19
VWA3B-202ENST00000416277 FERMT3Q86UX7 667 aa16.21■□□□□ 0.19
VWA3B-202ENST00000416277 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
VWA3B-202ENST00000416277 EDC3Q96F86 508 aaKnown RBP16.21■□□□□ 0.19
VWA3B-202ENST00000416277 NLRP2Q9NX02 1062 aa16.21■□□□□ 0.19
VWA3B-202ENST00000416277 CGNQ9P2M7 1197 aaKnown RBP16.21■□□□□ 0.19
VWA3B-202ENST00000416277 ZNF609O15014 1411 aa16.21■□□□□ 0.18
VWA3B-202ENST00000416277 ZC3H6P61129 1189 aaKnown RBP16.2■□□□□ 0.18
VWA3B-202ENST00000416277 NUP62CLQ9H1M0 184 aa16.2■□□□□ 0.18
VWA3B-202ENST00000416277 TFCP2Q12800 502 aa16.2■□□□□ 0.18
VWA3B-202ENST00000416277 MAP3K11Q16584 847 aa16.2■□□□□ 0.18
VWA3B-202ENST00000416277 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
VWA3B-202ENST00000416277 GTF3C6Q969F1 213 aa16.19■□□□□ 0.18
VWA3B-202ENST00000416277 TTC12Q9H892 705 aaPredicted RBP16.19■□□□□ 0.18
VWA3B-202ENST00000416277 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
VWA3B-202ENST00000416277 LIG1P18858 919 aa16.19■□□□□ 0.18
VWA3B-202ENST00000416277 NOLC1Q14978 699 aaKnown RBP eCLIP16.19■□□□□ 0.18
VWA3B-202ENST00000416277 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
VWA3B-202ENST00000416277 SPTLC3Q9NUV7 552 aa16.19■□□□□ 0.18
VWA3B-202ENST00000416277 MYH15Q9Y2K3 1946 aa16.19■□□□□ 0.18
VWA3B-202ENST00000416277 AP5Z1O43299 807 aa16.18■□□□□ 0.18
VWA3B-202ENST00000416277 TPM3P06753 285 aa16.18■□□□□ 0.18
VWA3B-202ENST00000416277 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
VWA3B-202ENST00000416277 FAM173BQ6P4H8 233 aa16.18■□□□□ 0.18
VWA3B-202ENST00000416277 UBE3BQ7Z3V4 1068 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms