RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 RBM26Q5T8P6 1007 aaKnown RBP12.43□□□□□ -0.42
LINC01238-201ENST00000416204 CDC37L1Q7L3B6 337 aa12.43□□□□□ -0.42
LINC01238-201ENST00000416204 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
LINC01238-201ENST00000416204 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
LINC01238-201ENST00000416204 TRPA1O75762 1119 aa12.42□□□□□ -0.42
LINC01238-201ENST00000416204 NOGQ13253 232 aa12.42□□□□□ -0.42
LINC01238-201ENST00000416204 PROSER3Q2NL68 480 aa12.42□□□□□ -0.42
LINC01238-201ENST00000416204 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
LINC01238-201ENST00000416204 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
LINC01238-201ENST00000416204 PPP1R42Q7Z4L9 355 aa12.42□□□□□ -0.42
LINC01238-201ENST00000416204 MPNDQ8N594 471 aa12.42□□□□□ -0.42
LINC01238-201ENST00000416204 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
LINC01238-201ENST00000416204 UTP14AQ9BVJ6 771 aaKnown RBP12.42□□□□□ -0.42
LINC01238-201ENST00000416204 PGAP2Q9UHJ9 254 aa12.42□□□□□ -0.42
LINC01238-201ENST00000416204 FAM155AB1AL88 458 aaPredicted RBP12.41□□□□□ -0.42
LINC01238-201ENST00000416204 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
LINC01238-201ENST00000416204 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
LINC01238-201ENST00000416204 KIF23Q02241 960 aaPredicted RBP12.41□□□□□ -0.42
LINC01238-201ENST00000416204 KIAA2012Q0VF49 1180 aa12.41□□□□□ -0.42
LINC01238-201ENST00000416204 TNIP1Q15025 636 aa12.41□□□□□ -0.42
LINC01238-201ENST00000416204 SUPT20HQ8NEM7 779 aa12.41□□□□□ -0.42
LINC01238-201ENST00000416204 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
LINC01238-201ENST00000416204 RTFDC1Q9BY42 306 aaPredicted RBP12.41□□□□□ -0.42
LINC01238-201ENST00000416204 DBNDD1Q9H9R9 158 aa12.41□□□□□ -0.42
LINC01238-201ENST00000416204 KCNQ5Q9NR82 932 aa12.41□□□□□ -0.42
LINC01238-201ENST00000416204 IBTKQ9P2D0 1353 aaPredicted RBP12.41□□□□□ -0.42
LINC01238-201ENST00000416204 H7C1D1 291 aa12.4□□□□□ -0.42
LINC01238-201ENST00000416204 RIMBP2O15034 1052 aa12.4□□□□□ -0.42
LINC01238-201ENST00000416204 HTATSF1O43719 755 aaKnown RBP12.4□□□□□ -0.42
LINC01238-201ENST00000416204 ZNF157P51786 506 aaPredicted RBP12.4□□□□□ -0.42
LINC01238-201ENST00000416204 AIMP1Q12904 312 aaKnown RBP12.4□□□□□ -0.42
LINC01238-201ENST00000416204 RGMBQ6NW40 437 aa12.4□□□□□ -0.42
LINC01238-201ENST00000416204 KRT26Q7Z3Y9 468 aa12.4□□□□□ -0.42
LINC01238-201ENST00000416204 RNF186Q9NXI6 227 aa12.4□□□□□ -0.42
LINC01238-201ENST00000416204 ASTN2O75129 1339 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-201ENST00000416204 PSMD14O00487 310 aa12.39□□□□□ -0.43
LINC01238-201ENST00000416204 PARP10Q53GL7 1025 aa12.39□□□□□ -0.43
LINC01238-201ENST00000416204 SP8Q8IXZ3 490 aa12.39□□□□□ -0.43
LINC01238-201ENST00000416204 ZC3H15Q8WU90 426 aaKnown RBP12.39□□□□□ -0.43
LINC01238-201ENST00000416204 GBA2Q9HCG7 927 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-201ENST00000416204 PDE4DIPQ5VU43 2346 aa12.39□□□□□ -0.43
LINC01238-201ENST00000416204 BBOX1O75936 387 aa12.38□□□□□ -0.43
LINC01238-201ENST00000416204 PDIA6Q15084 440 aa12.38□□□□□ -0.43
LINC01238-201ENST00000416204 DOK7Q18PE1 504 aa12.38□□□□□ -0.43
LINC01238-201ENST00000416204 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
LINC01238-201ENST00000416204 VPS33BQ9H267 617 aa12.38□□□□□ -0.43
LINC01238-201ENST00000416204 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
LINC01238-201ENST00000416204 KDM3BQ7LBC6 1761 aa12.38□□□□□ -0.43
LINC01238-201ENST00000416204 GRAPQ13588 217 aa12.37□□□□□ -0.43
LINC01238-201ENST00000416204 SLC10A5Q5PT55 438 aa12.37□□□□□ -0.43
LINC01238-201ENST00000416204 LRP10Q7Z4F1 713 aa12.37□□□□□ -0.43
LINC01238-201ENST00000416204 NLRP10Q86W26 655 aa12.37□□□□□ -0.43
LINC01238-201ENST00000416204 C2orf69Q8N8R5 385 aa12.37□□□□□ -0.43
LINC01238-201ENST00000416204 GRAPLQ8TC17 118 aaPredicted RBP12.37□□□□□ -0.43
LINC01238-201ENST00000416204 PNISRQ8TF01 805 aaKnown RBP12.37□□□□□ -0.43
LINC01238-201ENST00000416204 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
LINC01238-201ENST00000416204 DUOX1Q9NRD9 1551 aa12.37□□□□□ -0.43
LINC01238-201ENST00000416204 TAF1P21675 1872 aa12.37□□□□□ -0.43
LINC01238-201ENST00000416204 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
LINC01238-201ENST00000416204 C6orf229H3BNL8 230 aa12.36□□□□□ -0.43
LINC01238-201ENST00000416204 RTL5Q5HYW3 569 aaPredicted RBP12.36□□□□□ -0.43
LINC01238-201ENST00000416204 XAGE3Q8WTP9 111 aa12.36□□□□□ -0.43
LINC01238-201ENST00000416204 DCPSQ96C86 337 aaKnown RBP12.36□□□□□ -0.43
LINC01238-201ENST00000416204 CSRNP1Q96S65 589 aa12.36□□□□□ -0.43
LINC01238-201ENST00000416204 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
LINC01238-201ENST00000416204 NSFL1CQ9UNZ2 370 aaKnown RBP12.36□□□□□ -0.43
LINC01238-201ENST00000416204 RTL9Q8NET4 1388 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 GPSM2P81274 684 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 NFE2L2Q16236 605 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 COPS6Q7L5N1 327 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 CELF1Q92879 486 aaKnown RBP12.35□□□□□ -0.43
LINC01238-201ENST00000416204 SAGE1Q9NXZ1 904 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 GGA3Q9NZ52 723 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 LAMB2P55268 1798 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 COL4A1P02462 1669 aa12.35□□□□□ -0.43
LINC01238-201ENST00000416204 ECE2O60344 883 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 NEFMP07197 916 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 SLC10A3P09131 477 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 PRPF38BQ5VTL8 546 aaKnown RBP12.34□□□□□ -0.43
LINC01238-201ENST00000416204 MOB2Q70IA6 237 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 CTU1Q7Z7A3 348 aaKnown RBP12.34□□□□□ -0.43
LINC01238-201ENST00000416204 CCDC102AQ96A19 550 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 CDCA5Q96FF9 252 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 POLLQ9UGP5 575 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 HPS5Q9UPZ3 1129 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 SH3TC1Q8TE82 1336 aa12.34□□□□□ -0.43
LINC01238-201ENST00000416204 DLG5Q8TDM6 1919 aa12.33□□□□□ -0.44
LINC01238-201ENST00000416204 TBC1D8O95759 1140 aa12.33□□□□□ -0.44
LINC01238-201ENST00000416204 KRT24Q2M2I5 525 aa12.33□□□□□ -0.44
LINC01238-201ENST00000416204 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
LINC01238-201ENST00000416204 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
LINC01238-201ENST00000416204 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
LINC01238-201ENST00000416204 PRAMEF18Q5VWM3 479 aa12.32□□□□□ -0.44
LINC01238-201ENST00000416204 RASAL3Q86YV0 1011 aa12.32□□□□□ -0.44
LINC01238-201ENST00000416204 SULF1Q8IWU6 871 aa12.32□□□□□ -0.44
LINC01238-201ENST00000416204 DPF2Q92785 391 aa12.32□□□□□ -0.44
LINC01238-201ENST00000416204 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
LINC01238-201ENST00000416204 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms