RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ZBTB40Q9NUA8 1239 aa18.1■□□□□ 0.49
SGCE-202ENST00000415788 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
SGCE-202ENST00000415788 FOXO4P98177 505 aa18.09■□□□□ 0.49
SGCE-202ENST00000415788 RABL6Q3YEC7 729 aaPredicted RBP18.09■□□□□ 0.49
SGCE-202ENST00000415788 KAZALD1Q96I82 304 aa18.09■□□□□ 0.49
SGCE-202ENST00000415788 LRRFIP2Q9Y608 721 aaKnown RBP18.09■□□□□ 0.49
SGCE-202ENST00000415788 LAMB2P55268 1798 aa18.09■□□□□ 0.49
SGCE-202ENST00000415788 LRP5O75197 1615 aa18.09■□□□□ 0.49
SGCE-202ENST00000415788 H0YIN7 160 aa18.08■□□□□ 0.49
SGCE-202ENST00000415788 CSF1RP07333 972 aa18.08■□□□□ 0.49
SGCE-202ENST00000415788 PDE4AP27815 886 aa18.08■□□□□ 0.49
SGCE-202ENST00000415788 TTLL11Q8NHH1 800 aa18.08■□□□□ 0.49
SGCE-202ENST00000415788 BACH2Q9BYV9 841 aa18.08■□□□□ 0.49
SGCE-202ENST00000415788 BICC1Q9H694 974 aaKnown RBP18.08■□□□□ 0.49
SGCE-202ENST00000415788 RPGRQ92834 1020 aaKnown RBP18.07■□□□□ 0.48
SGCE-202ENST00000415788 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
SGCE-202ENST00000415788 DDX60Q8IY21 1712 aaKnown RBP18.07■□□□□ 0.48
SGCE-202ENST00000415788 LMBR1LQ6UX01 489 aa18.07■□□□□ 0.48
SGCE-202ENST00000415788 C3orf67Q6ZVT6 689 aa18.07■□□□□ 0.48
SGCE-202ENST00000415788 C2CD5Q86YS7 1000 aa18.07■□□□□ 0.48
SGCE-202ENST00000415788 KIF13BQ9NQT8 1826 aa18.06■□□□□ 0.48
SGCE-202ENST00000415788 SRGNP10124 158 aa18.06■□□□□ 0.48
SGCE-202ENST00000415788 NPR1P16066 1061 aa18.06■□□□□ 0.48
SGCE-202ENST00000415788 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
SGCE-202ENST00000415788 KLHL34Q8N239 644 aa18.06■□□□□ 0.48
SGCE-202ENST00000415788 EXOC6Q8TAG9 804 aa18.06■□□□□ 0.48
SGCE-202ENST00000415788 MASTLQ96GX5 879 aa18.06■□□□□ 0.48
SGCE-202ENST00000415788 TNRC6CQ9HCJ0 1690 aaKnown RBP18.05■□□□□ 0.48
SGCE-202ENST00000415788 HOXA10P31260 410 aaPredicted RBP18.05■□□□□ 0.48
SGCE-202ENST00000415788 MTX1Q13505 466 aa18.05■□□□□ 0.48
SGCE-202ENST00000415788 ANKRD44Q8N8A2 993 aa18.05■□□□□ 0.48
SGCE-202ENST00000415788 DDRGK1Q96HY6 314 aa18.05■□□□□ 0.48
SGCE-202ENST00000415788 RBM17Q96I25 401 aaKnown RBP18.05■□□□□ 0.48
SGCE-202ENST00000415788 ANKRD31Q8N7Z5 1873 aa18.05■□□□□ 0.48
SGCE-202ENST00000415788 STYK1Q6J9G0 422 aa18.05■□□□□ 0.48
SGCE-202ENST00000415788 DDX46Q7L014 1031 aaKnown RBP18.05■□□□□ 0.48
SGCE-202ENST00000415788 FHDC1Q9C0D6 1143 aaPredicted RBP18.05■□□□□ 0.48
SGCE-202ENST00000415788 CRAMP1Q96RY5 1269 aa18.04■□□□□ 0.48
SGCE-202ENST00000415788 CHMP3Q9Y3E7 222 aa18.04■□□□□ 0.48
SGCE-202ENST00000415788 ALDH1B1P30837 517 aa18.03■□□□□ 0.48
SGCE-202ENST00000415788 IFIT5Q13325 482 aaKnown RBP18.03■□□□□ 0.48
SGCE-202ENST00000415788 CCDC57Q2TAC2 916 aa18.03■□□□□ 0.48
SGCE-202ENST00000415788 RPAP2Q8IXW5 612 aaPredicted RBP18.03■□□□□ 0.48
SGCE-202ENST00000415788 CDC5LQ99459 802 aaKnown RBP18.03■□□□□ 0.48
SGCE-202ENST00000415788 GREM2Q9H772 168 aa18.03■□□□□ 0.48
SGCE-202ENST00000415788 C1orf115Q9H7X2 142 aa18.03■□□□□ 0.48
SGCE-202ENST00000415788 DPEP1P16444 411 aa18.03■□□□□ 0.48
SGCE-202ENST00000415788 ITGA6P23229 1130 aa18.03■□□□□ 0.48
SGCE-202ENST00000415788 FAM161AQ3B820 660 aa18.03■□□□□ 0.48
SGCE-202ENST00000415788 CNKSR1Q969H4 720 aa18.03■□□□□ 0.48
SGCE-202ENST00000415788 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.48
SGCE-202ENST00000415788 CHRNA5P30532 468 aa18.02■□□□□ 0.48
SGCE-202ENST00000415788 ATP8B2P98198 1209 aa18.02■□□□□ 0.48
SGCE-202ENST00000415788 SYT17Q9BSW7 474 aa18.02■□□□□ 0.48
SGCE-202ENST00000415788 A0A0G2JLW4 131 aa18.01■□□□□ 0.47
SGCE-202ENST00000415788 SRGAP3O43295 1099 aa18.01■□□□□ 0.47
SGCE-202ENST00000415788 GRAPQ13588 217 aa18.01■□□□□ 0.47
SGCE-202ENST00000415788 CEP85Q6P2H3 762 aa18.01■□□□□ 0.47
SGCE-202ENST00000415788 GRAPLQ8TC17 118 aaPredicted RBP18.01■□□□□ 0.47
SGCE-202ENST00000415788 ZNF622Q969S3 477 aaKnown RBP eCLIP18.01■□□□□ 0.47
SGCE-202ENST00000415788 CCDC85AQ96PX6 553 aaPredicted RBP18.01■□□□□ 0.47
SGCE-202ENST00000415788 MYH3P11055 1940 aa18.01■□□□□ 0.47
SGCE-202ENST00000415788 PIM2Q9P1W9 311 aa18.01■□□□□ 0.47
SGCE-202ENST00000415788 HMMRO75330 724 aa18■□□□□ 0.47
SGCE-202ENST00000415788 BBOX1O75936 387 aa18■□□□□ 0.47
SGCE-202ENST00000415788 KCNA3P22001 575 aa18■□□□□ 0.47
SGCE-202ENST00000415788 TMC4Q7Z404 712 aa18■□□□□ 0.47
SGCE-202ENST00000415788 TAF7LQ5H9L4 462 aa17.99■□□□□ 0.47
SGCE-202ENST00000415788 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
SGCE-202ENST00000415788 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
SGCE-202ENST00000415788 COL11A2P13942 1736 aaPredicted RBP17.99■□□□□ 0.47
SGCE-202ENST00000415788 IGHMBP2P38935 993 aaKnown RBP17.99■□□□□ 0.47
SGCE-202ENST00000415788 RPS8P62241 208 aaKnown RBP17.99■□□□□ 0.47
SGCE-202ENST00000415788 TTLL6Q8N841 843 aa17.99■□□□□ 0.47
SGCE-202ENST00000415788 NLGN2Q8NFZ4 835 aa17.99■□□□□ 0.47
SGCE-202ENST00000415788 SSH3Q8TE77 659 aa17.99■□□□□ 0.47
SGCE-202ENST00000415788 PNMA6EA0A0J9YXQ4 647 aa17.98■□□□□ 0.47
SGCE-202ENST00000415788 POLA2Q14181 598 aa17.98■□□□□ 0.47
SGCE-202ENST00000415788 KIAA1551Q9HCM1 1747 aa17.97■□□□□ 0.47
SGCE-202ENST00000415788 CELF1Q92879 486 aaKnown RBP17.97■□□□□ 0.47
SGCE-202ENST00000415788 FBXO3Q9UK99 471 aa17.97■□□□□ 0.47
SGCE-202ENST00000415788 DLEC1Q9Y238 1755 aa17.97■□□□□ 0.47
SGCE-202ENST00000415788 RFX5P48382 616 aaPredicted RBP17.97■□□□□ 0.47
SGCE-202ENST00000415788 PRPF40BQ6NWY9 871 aaKnown RBP17.97■□□□□ 0.47
SGCE-202ENST00000415788 MPHOSPH8Q99549 860 aa17.97■□□□□ 0.47
SGCE-202ENST00000415788 COPRSQ9NQ92 184 aa17.97■□□□□ 0.47
SGCE-202ENST00000415788 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
SGCE-202ENST00000415788 PPEF1O14829 653 aaPredicted RBP17.96■□□□□ 0.47
SGCE-202ENST00000415788 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
SGCE-202ENST00000415788 BSDC1Q9NW68 430 aaPredicted RBP17.96■□□□□ 0.47
SGCE-202ENST00000415788 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
SGCE-202ENST00000415788 SIRT2Q8IXJ6 389 aa17.95■□□□□ 0.46
SGCE-202ENST00000415788 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
SGCE-202ENST00000415788 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
SGCE-202ENST00000415788 SOGA3Q5TF21 947 aa17.94■□□□□ 0.46
SGCE-202ENST00000415788 CC2D2BQ6DHV5 1058 aa17.94■□□□□ 0.46
SGCE-202ENST00000415788 ATP6V0A2Q9Y487 856 aa17.94■□□□□ 0.46
SGCE-202ENST00000415788 CIAO1O76071 339 aa17.93■□□□□ 0.46
SGCE-202ENST00000415788 HDAC1Q13547 482 aaPredicted RBP17.93■□□□□ 0.46
SGCE-202ENST00000415788 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms