RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 NDUFB9Q9Y6M9 179 aa14.81□□□□□ -0.04
UBA3-203ENST00000415609 STX6O43752 255 aa14.8□□□□□ -0.04
UBA3-203ENST00000415609 ZSCAN22P10073 491 aaPredicted RBP14.8□□□□□ -0.04
UBA3-203ENST00000415609 TRIM44Q96DX7 344 aaPredicted RBP14.8□□□□□ -0.04
UBA3-203ENST00000415609 GDPD2Q9HCC8 539 aa14.8□□□□□ -0.04
UBA3-203ENST00000415609 CCDC9Q9Y3X0 531 aaKnown RBP14.8□□□□□ -0.04
UBA3-203ENST00000415609 SYT1P21579 422 aa14.8□□□□□ -0.04
UBA3-203ENST00000415609 TMOD3Q9NYL9 352 aa14.8□□□□□ -0.04
UBA3-203ENST00000415609 TOGARAM1Q9Y4F4 1720 aa14.79□□□□□ -0.04
UBA3-203ENST00000415609 SYCE3A1L190 88 aa14.79□□□□□ -0.04
UBA3-203ENST00000415609 CCDC191Q8NCU4 936 aa14.79□□□□□ -0.04
UBA3-203ENST00000415609 HAUS7Q99871 368 aa14.79□□□□□ -0.04
UBA3-203ENST00000415609 ZNF330Q9Y3S2 320 aaPredicted RBP14.79□□□□□ -0.04
UBA3-203ENST00000415609 RFX7Q2KHR2 1363 aa14.79□□□□□ -0.04
UBA3-203ENST00000415609 JCADQ9P266 1359 aa14.79□□□□□ -0.04
UBA3-203ENST00000415609 GJB2P29033 226 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 PRIM1P49642 420 aaKnown RBP14.78□□□□□ -0.04
UBA3-203ENST00000415609 CCDC173Q0VFZ6 552 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 BLOC1S2Q6QNY1 142 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 NEUROD6Q96NK8 337 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 NHSL1Q5SYE7 1610 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 TAF5LO75529 589 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 ME3Q16798 604 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 DDX46Q7L014 1031 aaKnown RBP14.78□□□□□ -0.04
UBA3-203ENST00000415609 USP48Q86UV5 1035 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 HMG20BQ9P0W2 317 aa14.78□□□□□ -0.04
UBA3-203ENST00000415609 ZNF609O15014 1411 aa14.77□□□□□ -0.04
UBA3-203ENST00000415609 LRSAM1Q6UWE0 723 aa14.77□□□□□ -0.04
UBA3-203ENST00000415609 ATG9AQ7Z3C6 839 aa14.77□□□□□ -0.04
UBA3-203ENST00000415609 NECAB1Q8N987 351 aa14.77□□□□□ -0.04
UBA3-203ENST00000415609 SYAP1Q96A49 352 aaPredicted RBP14.77□□□□□ -0.04
UBA3-203ENST00000415609 RBSNQ9H1K0 784 aa14.77□□□□□ -0.04
UBA3-203ENST00000415609 TPCN1Q9ULQ1 816 aa14.77□□□□□ -0.04
UBA3-203ENST00000415609 DTNBO60941 627 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 F13A1P00488 732 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 RPS6KB1P23443 525 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 IL15P40933 162 aaPredicted RBP14.76□□□□□ -0.05
UBA3-203ENST00000415609 TCEANC2Q96MN5 208 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 CNPY2Q9Y2B0 182 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 TAF6LQ9Y6J9 622 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 GADD45BO75293 160 aaPredicted RBP14.76□□□□□ -0.05
UBA3-203ENST00000415609 ST3GAL1Q11201 340 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 ANKRD1Q15327 319 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 CCDC129Q6ZRS4 1044 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 ZNF594Q96JF6 807 aaPredicted RBP14.76□□□□□ -0.05
UBA3-203ENST00000415609 ATP6V1DQ9Y5K8 247 aa14.76□□□□□ -0.05
UBA3-203ENST00000415609 EYA2O00167 538 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 CHGBP05060 677 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 COL9A3Q14050 684 aaPredicted RBP14.75□□□□□ -0.05
UBA3-203ENST00000415609 SEC62Q99442 399 aaKnown RBP14.75□□□□□ -0.05
UBA3-203ENST00000415609 GOLIM4O00461 696 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 TIMM10P62072 90 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 KRT32Q14532 448 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 MCMDC2Q4G0Z9 681 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 LRRC24Q50LG9 513 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 USPL1Q5W0Q7 1092 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 KBTBD3Q8NAB2 608 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 TMEM87AQ8NBN3 555 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 PPP1R9BQ96SB3 815 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 GPR108Q9NPR9 543 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 BTG4Q9NY30 223 aa14.75□□□□□ -0.05
UBA3-203ENST00000415609 VPS37CA5D8V6 355 aaPredicted RBP14.74□□□□□ -0.05
UBA3-203ENST00000415609 TCIRG1Q13488 830 aa14.74□□□□□ -0.05
UBA3-203ENST00000415609 TSGA10IPQ3SY00 556 aa14.74□□□□□ -0.05
UBA3-203ENST00000415609 DNAJC10Q8IXB1 793 aa14.74□□□□□ -0.05
UBA3-203ENST00000415609 ISCA1Q9BUE6 129 aa14.74□□□□□ -0.05
UBA3-203ENST00000415609 PAG1Q9NWQ8 432 aa14.74□□□□□ -0.05
UBA3-203ENST00000415609 ASAP1Q9ULH1 1129 aa14.74□□□□□ -0.05
UBA3-203ENST00000415609 MTMR6Q9Y217 621 aa14.74□□□□□ -0.05
UBA3-203ENST00000415609 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
UBA3-203ENST00000415609 TCHHQ07283 1943 aa14.74□□□□□ -0.05
UBA3-203ENST00000415609 FIBPO43427 364 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 PIGBQ92521 554 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 SH3TC1Q8TE82 1336 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 ESPNB1AK53 854 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 CIAO1O76071 339 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 PHF14O94880 888 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 TOB2Q14106 344 aaPredicted RBP14.73□□□□□ -0.05
UBA3-203ENST00000415609 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 TEX13AQ9BXU3 409 aaPredicted RBP14.73□□□□□ -0.05
UBA3-203ENST00000415609 ALDH8A1Q9H2A2 487 aaPredicted RBP14.73□□□□□ -0.05
UBA3-203ENST00000415609 ATG3Q9NT62 314 aa14.73□□□□□ -0.05
UBA3-203ENST00000415609 A0A1B0GUL7 405 aa14.72□□□□□ -0.05
UBA3-203ENST00000415609 CCDC57Q2TAC2 916 aa14.72□□□□□ -0.05
UBA3-203ENST00000415609 NEK1Q96PY6 1258 aa14.72□□□□□ -0.05
UBA3-203ENST00000415609 PUS3Q9BZE2 481 aaKnown RBP14.72□□□□□ -0.05
UBA3-203ENST00000415609 STARD3NLO95772 234 aa14.71□□□□□ -0.05
UBA3-203ENST00000415609 LARP1BQ659C4 914 aaKnown RBP14.71□□□□□ -0.05
UBA3-203ENST00000415609 VSIG10Q8N0Z9 540 aa14.71□□□□□ -0.05
UBA3-203ENST00000415609 IFIT1P09914 478 aaKnown RBP14.71□□□□□ -0.05
UBA3-203ENST00000415609 CLCN1P35523 988 aa14.71□□□□□ -0.05
UBA3-203ENST00000415609 STK3Q13188 491 aa14.71□□□□□ -0.05
UBA3-203ENST00000415609 CSPP1Q1MSJ5 1256 aa14.71□□□□□ -0.05
UBA3-203ENST00000415609 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
UBA3-203ENST00000415609 TSPY26PQ9H489 355 aa14.71□□□□□ -0.05
UBA3-203ENST00000415609 CEP126Q9P2H0 1117 aa14.71□□□□□ -0.05
UBA3-203ENST00000415609 CYP21A2P08686 494 aa14.7□□□□□ -0.06
UBA3-203ENST00000415609 UBE2HP62256 183 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms