RNA–Protein interactions for RNA: ENST00000415140.6

LTBP1-206, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 5

Gene LTBP1, Length 799 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-206ENST00000415140 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
LTBP1-206ENST00000415140 CWF19L2Q2TBE0 894 aaKnown RBP13.53□□□□□ -0.24
LTBP1-206ENST00000415140 SYNE4Q8N205 404 aa13.53□□□□□ -0.24
LTBP1-206ENST00000415140 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
LTBP1-206ENST00000415140 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
LTBP1-206ENST00000415140 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
LTBP1-206ENST00000415140 PDE8AO60658 829 aa13.52□□□□□ -0.25
LTBP1-206ENST00000415140 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
LTBP1-206ENST00000415140 CASP7P55210 303 aa13.52□□□□□ -0.25
LTBP1-206ENST00000415140 SOGA3Q5TF21 947 aa13.52□□□□□ -0.25
LTBP1-206ENST00000415140 RPGRQ92834 1020 aaKnown RBP13.52□□□□□ -0.25
LTBP1-206ENST00000415140 RBM17Q96I25 401 aaKnown RBP13.52□□□□□ -0.25
LTBP1-206ENST00000415140 PLA2G12BQ9BX93 195 aa13.52□□□□□ -0.25
LTBP1-206ENST00000415140 NOB1Q9ULX3 412 aaKnown RBP13.52□□□□□ -0.25
LTBP1-206ENST00000415140 ARFGEF1Q9Y6D6 1849 aa13.52□□□□□ -0.25
LTBP1-206ENST00000415140 GRIPAP1Q4V328 841 aa13.51□□□□□ -0.25
LTBP1-206ENST00000415140 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
LTBP1-206ENST00000415140 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
LTBP1-206ENST00000415140 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
LTBP1-206ENST00000415140 C7orf43Q8WVR3 580 aa13.51□□□□□ -0.25
LTBP1-206ENST00000415140 COL11A2P13942 1736 aaPredicted RBP13.5□□□□□ -0.25
LTBP1-206ENST00000415140 BBOX1O75936 387 aa13.5□□□□□ -0.25
LTBP1-206ENST00000415140 CCT4P50991 539 aaKnown RBP13.5□□□□□ -0.25
LTBP1-206ENST00000415140 PRPF40BQ6NWY9 871 aaKnown RBP13.5□□□□□ -0.25
LTBP1-206ENST00000415140 SLC4A10Q6U841 1118 aa13.5□□□□□ -0.25
LTBP1-206ENST00000415140 TNRC6CQ9HCJ0 1690 aaKnown RBP13.5□□□□□ -0.25
LTBP1-206ENST00000415140 UTYO14607 1347 aa13.49□□□□□ -0.25
LTBP1-206ENST00000415140 GRM8O00222 908 aa13.49□□□□□ -0.25
LTBP1-206ENST00000415140 BCAR3O75815 825 aa13.49□□□□□ -0.25
LTBP1-206ENST00000415140 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
LTBP1-206ENST00000415140 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
LTBP1-206ENST00000415140 TMC4Q7Z404 712 aa13.49□□□□□ -0.25
LTBP1-206ENST00000415140 LAMB2P55268 1798 aa13.48□□□□□ -0.25
LTBP1-206ENST00000415140 DDX60Q8IY21 1712 aaKnown RBP13.48□□□□□ -0.25
LTBP1-206ENST00000415140 CSF1RP07333 972 aa13.48□□□□□ -0.25
LTBP1-206ENST00000415140 GRAPQ13588 217 aa13.48□□□□□ -0.25
LTBP1-206ENST00000415140 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
LTBP1-206ENST00000415140 RTL5Q5HYW3 569 aaPredicted RBP13.48□□□□□ -0.25
LTBP1-206ENST00000415140 INTS3Q68E01 1043 aaKnown RBP13.48□□□□□ -0.25
LTBP1-206ENST00000415140 ATF7IPQ6VMQ6 1270 aa13.48□□□□□ -0.25
LTBP1-206ENST00000415140 ARHGAP27Q6ZUM4 889 aa13.48□□□□□ -0.25
LTBP1-206ENST00000415140 TTLL11Q8NHH1 800 aa13.48□□□□□ -0.25
LTBP1-206ENST00000415140 GRAPLQ8TC17 118 aaPredicted RBP13.48□□□□□ -0.25
LTBP1-206ENST00000415140 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
LTBP1-206ENST00000415140 SLX4Q8IY92 1834 aa13.48□□□□□ -0.25
LTBP1-206ENST00000415140 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
LTBP1-206ENST00000415140 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
LTBP1-206ENST00000415140 C21orf2O43822 256 aa13.47□□□□□ -0.25
LTBP1-206ENST00000415140 ZKSCAN2Q63HK3 967 aa13.47□□□□□ -0.25
LTBP1-206ENST00000415140 RTKN2Q8IZC4 609 aa13.47□□□□□ -0.25
LTBP1-206ENST00000415140 WWC3Q9ULE0 1092 aa13.47□□□□□ -0.25
LTBP1-206ENST00000415140 ABCC4O15439 1325 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 TRIM27P14373 513 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 CTSWP56202 376 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
LTBP1-206ENST00000415140 USP44Q9H0E7 712 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 ATP6V0A2Q9Y487 856 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 CHD4Q14839 1912 aa13.46□□□□□ -0.25
LTBP1-206ENST00000415140 RPS8P62241 208 aaKnown RBP13.45□□□□□ -0.26
LTBP1-206ENST00000415140 TMX4Q9H1E5 349 aaPredicted RBP13.45□□□□□ -0.26
LTBP1-206ENST00000415140 RCAN3Q9UKA8 241 aa13.45□□□□□ -0.26
LTBP1-206ENST00000415140 PPEF1O14829 653 aaPredicted RBP13.44□□□□□ -0.26
LTBP1-206ENST00000415140 NBPF7P0C2Y1 421 aaPredicted RBP13.44□□□□□ -0.26
LTBP1-206ENST00000415140 MS4A1P11836 297 aa13.44□□□□□ -0.26
LTBP1-206ENST00000415140 FOXO4P98177 505 aa13.44□□□□□ -0.26
LTBP1-206ENST00000415140 FRAT1Q92837 279 aaPredicted RBP13.44□□□□□ -0.26
LTBP1-206ENST00000415140 PSMD1Q99460 953 aa13.44□□□□□ -0.26
LTBP1-206ENST00000415140 MYH3P11055 1940 aa13.43□□□□□ -0.26
LTBP1-206ENST00000415140 NFKBIEO00221 500 aa13.43□□□□□ -0.26
LTBP1-206ENST00000415140 SNED1Q8TER0 1413 aa13.43□□□□□ -0.26
LTBP1-206ENST00000415140 CELF1Q92879 486 aaKnown RBP13.43□□□□□ -0.26
LTBP1-206ENST00000415140 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
LTBP1-206ENST00000415140 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
LTBP1-206ENST00000415140 GOLGB1Q14789 3259 aaKnown RBP13.42□□□□□ -0.26
LTBP1-206ENST00000415140 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
LTBP1-206ENST00000415140 LMNB1P20700 586 aa13.42□□□□□ -0.26
LTBP1-206ENST00000415140 DSG3P32926 999 aa13.42□□□□□ -0.26
LTBP1-206ENST00000415140 FKBP4Q02790 459 aaKnown RBP eCLIP13.42□□□□□ -0.26
LTBP1-206ENST00000415140 RABL6Q3YEC7 729 aaPredicted RBP13.42□□□□□ -0.26
LTBP1-206ENST00000415140 DZIP1LQ8IYY4 767 aaKnown RBP13.42□□□□□ -0.26
LTBP1-206ENST00000415140 KAZALD1Q96I82 304 aa13.42□□□□□ -0.26
LTBP1-206ENST00000415140 RTFDC1Q9BY42 306 aaPredicted RBP13.42□□□□□ -0.26
LTBP1-206ENST00000415140 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
LTBP1-206ENST00000415140 GREM2Q9H772 168 aa13.42□□□□□ -0.26
LTBP1-206ENST00000415140 SEC31BQ9NQW1 1179 aa13.42□□□□□ -0.26
LTBP1-206ENST00000415140 ZC3H4Q9UPT8 1303 aaKnown RBP13.41□□□□□ -0.26
LTBP1-206ENST00000415140 GNAI3P08754 354 aa13.41□□□□□ -0.26
LTBP1-206ENST00000415140 LMBR1LQ6UX01 489 aa13.41□□□□□ -0.26
LTBP1-206ENST00000415140 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
LTBP1-206ENST00000415140 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
LTBP1-206ENST00000415140 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
LTBP1-206ENST00000415140 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
LTBP1-206ENST00000415140 ANKRD18BA2A2Z9 1011 aa13.4□□□□□ -0.26
LTBP1-206ENST00000415140 ITGA6P23229 1130 aa13.4□□□□□ -0.26
LTBP1-206ENST00000415140 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
LTBP1-206ENST00000415140 EPHA10Q5JZY3 1008 aa13.4□□□□□ -0.26
LTBP1-206ENST00000415140 MPNDQ8N594 471 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms