RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 FAM182BQ5T319 152 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 ANKRD13DQ6ZTN6 518 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 ARHGEF25Q86VW2 580 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 ZNF592Q92610 1267 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 ZNF428Q96B54 188 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 LTV1Q96GA3 475 aaPredicted RBP6.69□□□□□ -1.34
VPS41-205ENST00000414632 SPSB2Q99619 263 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 NUDT12Q9BQG2 462 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 PANK3Q9H999 370 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 GNEQ9Y223 722 aaKnown RBP6.69□□□□□ -1.34
VPS41-205ENST00000414632 PCDHB9Q9Y5E1 797 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 SPATA31A1Q5TZJ5 1347 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 CRB1P82279 1406 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 ABCC6O95255 1503 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 RASA1P20936 1047 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 TNNT2P45379 298 aaPredicted RBP6.68□□□□□ -1.34
VPS41-205ENST00000414632 MCCD1P59942 119 aaPredicted RBP6.68□□□□□ -1.34
VPS41-205ENST00000414632 CRTC2Q53ET0 693 aaPredicted RBP6.68□□□□□ -1.34
VPS41-205ENST00000414632 TOM1L2Q6ZVM7 507 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 RNF135Q8IUD6 432 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 PHTF2Q8N3S3 785 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 GPKOWQ92917 476 aaPredicted RBP eCLIP6.68□□□□□ -1.345e-7■■■■■ 43.5
VPS41-205ENST00000414632 WNT2BQ93097 391 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 OCSTAMPQ9BR26 566 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 WBP1LQ9NX94 342 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 SBF2Q86WG5 1849 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 CCDC7Q96M83 1385 aa6.68□□□□□ -1.34
VPS41-205ENST00000414632 RGPD1P0DJD0 1748 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 TNS1Q9HBL0 1735 aaKnown RBP6.67□□□□□ -1.34
VPS41-205ENST00000414632 FAM196BA6NMK8 535 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 MMP16P51512 607 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 NCOA4Q13772 614 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 ANKRD24Q8TF21 1146 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 MAP3K19Q56UN5 1328 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 WASHC2AQ641Q2 1341 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 WDR17Q8IZU2 1322 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 SHANK3Q9BYB0 1731 aa6.67□□□□□ -1.34
VPS41-205ENST00000414632 USP17L15C9J2P7 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L10C9JJH3 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L13C9JLJ4 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L12C9JPN9 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L11C9JVI0 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L21D6R901 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L18D6R9N7 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L22D6RA61 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L17D6RBQ6 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L19D6RCP7 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L20D6RJB6 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 PPM1GO15355 546 aaPredicted RBP6.66□□□□□ -1.34
VPS41-205ENST00000414632 AMPHP49418 695 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 COPS2P61201 443 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 USP17L24Q0WX57 530 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 PTK7Q13308 1070 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 NBPF14Q5TI25 921 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 PHLDB3Q6NSJ2 640 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 KRT27Q7Z3Y8 459 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 TCP11L2Q8N4U5 519 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 PLPP7Q8NBV4 271 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 ADAM32Q8TC27 787 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 FAM200AQ8TCP9 573 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 CDCA7Q9BWT1 371 aaPredicted RBP6.66□□□□□ -1.34
VPS41-205ENST00000414632 EMILIN1Q9Y6C2 1016 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 CGNL1Q0VF96 1302 aa6.66□□□□□ -1.34
VPS41-205ENST00000414632 KAT6BQ8WYB5 2073 aa6.65□□□□□ -1.34
VPS41-205ENST00000414632 ATP5J2-PTCD1G3V325 749 aa6.65□□□□□ -1.34
VPS41-205ENST00000414632 LZTS3O60299 673 aaPredicted RBP6.65□□□□□ -1.34
VPS41-205ENST00000414632 HOXC9P31274 260 aa6.65□□□□□ -1.34
VPS41-205ENST00000414632 USHBP1Q8N6Y0 703 aa6.65□□□□□ -1.34
VPS41-205ENST00000414632 ARHGAP9Q9BRR9 750 aa6.65□□□□□ -1.34
VPS41-205ENST00000414632 PRDM9Q9NQV7 894 aa6.65□□□□□ -1.34
VPS41-205ENST00000414632 NLRP2Q9NX02 1062 aa6.65□□□□□ -1.34
VPS41-205ENST00000414632 BLMP54132 1417 aaPredicted RBP6.65□□□□□ -1.35
VPS41-205ENST00000414632 SSFA2P28290 1259 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 MAP7D1Q3KQU3 841 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 TSGA10IPQ3SY00 556 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 HSP90AB2PQ58FF8 381 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 CC2D1BQ5T0F9 858 aaKnown RBP6.64□□□□□ -1.35
VPS41-205ENST00000414632 ZBTB33Q86T24 672 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 ANKMY2Q8IV38 441 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 IP6K1Q92551 441 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 KNSTRNQ9Y448 316 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 DOT1LQ8TEK3 1739 aa6.64□□□□□ -1.35
VPS41-205ENST00000414632 RTL1A6NKG5 1358 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 DISP2A7MBM2 1401 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 ARID4AP29374 1257 aaPredicted RBP6.63□□□□□ -1.35
VPS41-205ENST00000414632 FLT4P35916 1363 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 PDE3BQ13370 1112 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 DDB1Q16531 1140 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 EML3Q32P44 896 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 PTCRAQ6ISU1 281 aaPredicted RBP6.63□□□□□ -1.35
VPS41-205ENST00000414632 MORC1Q86VD1 984 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 CCDC24Q8N4L8 307 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 OGFOD1Q8N543 542 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 CARD10Q9BWT7 1032 aa6.63□□□□□ -1.35
VPS41-205ENST00000414632 THRAP3Q9Y2W1 955 aaKnown RBP6.63□□□□□ -1.35
VPS41-205ENST00000414632 VIRMAQ69YN4 1812 aaKnown RBP6.62□□□□□ -1.35
VPS41-205ENST00000414632 MEGF6O75095 1541 aa6.62□□□□□ -1.35
VPS41-205ENST00000414632 SMG6Q86US8 1419 aaKnown RBP6.62□□□□□ -1.35
VPS41-205ENST00000414632 E9PSI1 815 aa6.62□□□□□ -1.35
VPS41-205ENST00000414632 DPYDQ12882 1025 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms