RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 BRIP1Q9BX63 1249 aa19.18■□□□□ 0.66
LINC00116-201ENST00000414416 SPON1Q9HCB6 807 aa19.18■□□□□ 0.66
LINC00116-201ENST00000414416 CHMP3Q9Y3E7 222 aa19.18■□□□□ 0.66
LINC00116-201ENST00000414416 CSF1RP07333 972 aa19.17■□□□□ 0.66
LINC00116-201ENST00000414416 PTGER2P43116 358 aa19.17■□□□□ 0.66
LINC00116-201ENST00000414416 MTX1Q13505 466 aa19.17■□□□□ 0.66
LINC00116-201ENST00000414416 ATP8B2P98198 1209 aa19.16■□□□□ 0.66
LINC00116-201ENST00000414416 C3orf67Q6ZVT6 689 aa19.16■□□□□ 0.66
LINC00116-201ENST00000414416 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
LINC00116-201ENST00000414416 TNRC6CQ9HCJ0 1690 aaKnown RBP19.16■□□□□ 0.66
LINC00116-201ENST00000414416 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
LINC00116-201ENST00000414416 CCDC152Q4G0S7 254 aa19.16■□□□□ 0.66
LINC00116-201ENST00000414416 KDM2BQ8NHM5 1336 aa19.16■□□□□ 0.66
LINC00116-201ENST00000414416 PNMA6EA0A0J9YXQ4 647 aa19.15■□□□□ 0.66
LINC00116-201ENST00000414416 SF3B3Q15393 1217 aaKnown RBP19.15■□□□□ 0.66
LINC00116-201ENST00000414416 PDE6BP35913 854 aa19.15■□□□□ 0.66
LINC00116-201ENST00000414416 SIRT2Q8IXJ6 389 aa19.15■□□□□ 0.66
LINC00116-201ENST00000414416 ANKRD31Q8N7Z5 1873 aa19.14■□□□□ 0.65
LINC00116-201ENST00000414416 HMMRO75330 724 aa19.14■□□□□ 0.65
LINC00116-201ENST00000414416 IGHDP01880 384 aa19.14■□□□□ 0.65
LINC00116-201ENST00000414416 FAM161AQ3B820 660 aa19.14■□□□□ 0.65
LINC00116-201ENST00000414416 SKAP1Q86WV1 359 aa19.14■□□□□ 0.65
LINC00116-201ENST00000414416 GREM2Q9H772 168 aa19.14■□□□□ 0.65
LINC00116-201ENST00000414416 C10orf71Q711Q0 1435 aa19.14■□□□□ 0.65
LINC00116-201ENST00000414416 CCDC57Q2TAC2 916 aa19.13■□□□□ 0.65
LINC00116-201ENST00000414416 KLRG2A4D1S0 409 aaPredicted RBP19.13■□□□□ 0.65
LINC00116-201ENST00000414416 ITGA6P23229 1130 aa19.13■□□□□ 0.65
LINC00116-201ENST00000414416 IFIT5Q13325 482 aaKnown RBP19.13■□□□□ 0.65
LINC00116-201ENST00000414416 CRY2Q49AN0 593 aa19.13■□□□□ 0.65
LINC00116-201ENST00000414416 SSH3Q8TE77 659 aa19.13■□□□□ 0.65
LINC00116-201ENST00000414416 POLA2Q14181 598 aa19.12■□□□□ 0.65
LINC00116-201ENST00000414416 RTL9Q8NET4 1388 aa19.12■□□□□ 0.65
LINC00116-201ENST00000414416 RPGRQ92834 1020 aaKnown RBP19.12■□□□□ 0.65
LINC00116-201ENST00000414416 ANKRD18BA2A2Z9 1011 aa19.11■□□□□ 0.65
LINC00116-201ENST00000414416 HDAC1Q13547 482 aaPredicted RBP19.11■□□□□ 0.65
LINC00116-201ENST00000414416 RWDD1Q9H446 243 aaPredicted RBP19.11■□□□□ 0.65
LINC00116-201ENST00000414416 DDX46Q7L014 1031 aaKnown RBP19.1■□□□□ 0.65
LINC00116-201ENST00000414416 SEC31BQ9NQW1 1179 aa19.1■□□□□ 0.65
LINC00116-201ENST00000414416 RFX5P48382 616 aaPredicted RBP19.1■□□□□ 0.65
LINC00116-201ENST00000414416 TAF7LQ5H9L4 462 aa19.1■□□□□ 0.65
LINC00116-201ENST00000414416 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
LINC00116-201ENST00000414416 H0YIN7 160 aa19.09■□□□□ 0.65
LINC00116-201ENST00000414416 SRGNP10124 158 aa19.09■□□□□ 0.65
LINC00116-201ENST00000414416 CENPQQ7L2Z9 268 aaPredicted RBP19.09■□□□□ 0.65
LINC00116-201ENST00000414416 C2CD5Q86YS7 1000 aa19.09■□□□□ 0.65
LINC00116-201ENST00000414416 RBM17Q96I25 401 aaKnown RBP19.09■□□□□ 0.65
LINC00116-201ENST00000414416 PPP1R1BQ9UD71 204 aaPredicted RBP19.09■□□□□ 0.65
LINC00116-201ENST00000414416 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
LINC00116-201ENST00000414416 KLHDC4Q8TBB5 520 aa19.09■□□□□ 0.65
LINC00116-201ENST00000414416 CDC5LQ99459 802 aaKnown RBP19.09■□□□□ 0.65
LINC00116-201ENST00000414416 NPR1P16066 1061 aa19.08■□□□□ 0.64
LINC00116-201ENST00000414416 PTPN12Q05209 780 aaKnown RBP19.08■□□□□ 0.64
LINC00116-201ENST00000414416 MASTLQ96GX5 879 aa19.08■□□□□ 0.64
LINC00116-201ENST00000414416 ZNF594Q96JF6 807 aaPredicted RBP19.08■□□□□ 0.64
LINC00116-201ENST00000414416 PA2G4Q9UQ80 394 aaKnown RBP19.08■□□□□ 0.64
LINC00116-201ENST00000414416 HOXA10P31260 410 aaPredicted RBP19.07■□□□□ 0.64
LINC00116-201ENST00000414416 KLHL34Q8N239 644 aa19.07■□□□□ 0.64
LINC00116-201ENST00000414416 COPRSQ9NQ92 184 aa19.07■□□□□ 0.64
LINC00116-201ENST00000414416 CD2APQ9Y5K6 639 aa19.07■□□□□ 0.64
LINC00116-201ENST00000414416 COL11A2P13942 1736 aaPredicted RBP19.07■□□□□ 0.64
LINC00116-201ENST00000414416 CHRNA5P30532 468 aa19.07■□□□□ 0.64
LINC00116-201ENST00000414416 SURF6O75683 361 aaKnown RBP19.06■□□□□ 0.64
LINC00116-201ENST00000414416 IGHMBP2P38935 993 aaKnown RBP19.06■□□□□ 0.64
LINC00116-201ENST00000414416 TGFB2P61812 414 aa19.06■□□□□ 0.64
LINC00116-201ENST00000414416 ANKRD18AQ8IVF6 992 aa19.06■□□□□ 0.64
LINC00116-201ENST00000414416 CELF1Q92879 486 aaKnown RBP19.06■□□□□ 0.64
LINC00116-201ENST00000414416 CRAMP1Q96RY5 1269 aa19.06■□□□□ 0.64
LINC00116-201ENST00000414416 GRAPQ13588 217 aa19.05■□□□□ 0.64
LINC00116-201ENST00000414416 GRAPLQ8TC17 118 aaPredicted RBP19.05■□□□□ 0.64
LINC00116-201ENST00000414416 ZNF622Q969S3 477 aaKnown RBP eCLIP19.05■□□□□ 0.64
LINC00116-201ENST00000414416 MPHOSPH8Q99549 860 aa19.05■□□□□ 0.64
LINC00116-201ENST00000414416 SIL1Q9H173 461 aa19.05■□□□□ 0.64
LINC00116-201ENST00000414416 RBM19Q9Y4C8 960 aaKnown RBP19.05■□□□□ 0.64
LINC00116-201ENST00000414416 ALDH1B1P30837 517 aa19.05■□□□□ 0.64
LINC00116-201ENST00000414416 RPS8P62241 208 aaKnown RBP19.05■□□□□ 0.64
LINC00116-201ENST00000414416 STYK1Q6J9G0 422 aa19.05■□□□□ 0.64
LINC00116-201ENST00000414416 LDHAL6AQ6ZMR3 332 aa19.05■□□□□ 0.64
LINC00116-201ENST00000414416 DCTPP1Q9H773 170 aa19.05■□□□□ 0.64
LINC00116-201ENST00000414416 EXOC6BQ9Y2D4 811 aa19.05■□□□□ 0.64
LINC00116-201ENST00000414416 TAF1P21675 1872 aa19.04■□□□□ 0.64
LINC00116-201ENST00000414416 NOP58Q9Y2X3 529 aaKnown RBP19.04■□□□□ 0.64
LINC00116-201ENST00000414416 COL4A1P02462 1669 aa19.04■□□□□ 0.64
LINC00116-201ENST00000414416 A0A0G2JLW4 131 aa19.04■□□□□ 0.64
LINC00116-201ENST00000414416 G3BP1Q13283 466 aaKnown RBP eCLIP19.04■□□□□ 0.64
LINC00116-201ENST00000414416 DPEP1P16444 411 aa19.03■□□□□ 0.64
LINC00116-201ENST00000414416 OS9Q13438 667 aaPredicted RBP19.03■□□□□ 0.64
LINC00116-201ENST00000414416 HSP90AB4PQ58FF6 505 aa19.03■□□□□ 0.64
LINC00116-201ENST00000414416 GCC1Q96CN9 775 aa19.03■□□□□ 0.64
LINC00116-201ENST00000414416 CNNM1Q9NRU3 951 aa19.03■□□□□ 0.64
LINC00116-201ENST00000414416 FBXO3Q9UK99 471 aa19.03■□□□□ 0.64
LINC00116-201ENST00000414416 EYA2O00167 538 aa19.02■□□□□ 0.64
LINC00116-201ENST00000414416 PUS3Q9BZE2 481 aaKnown RBP19.02■□□□□ 0.64
LINC00116-201ENST00000414416 BSDC1Q9NW68 430 aaPredicted RBP19.02■□□□□ 0.64
LINC00116-201ENST00000414416 LRP5O75197 1615 aa19.02■□□□□ 0.64
LINC00116-201ENST00000414416 BBOX1O75936 387 aa19.02■□□□□ 0.63
LINC00116-201ENST00000414416 CIAO1O76071 339 aa19.02■□□□□ 0.63
LINC00116-201ENST00000414416 LRRC24Q50LG9 513 aa19.02■□□□□ 0.63
LINC00116-201ENST00000414416 CNKSR1Q969H4 720 aa19.02■□□□□ 0.63
LINC00116-201ENST00000414416 SPEF2Q9C093 1822 aa19.02■□□□□ 0.63
LINC00116-201ENST00000414416 DLEC1Q9Y238 1755 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms