RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 ZBTB24O43167 697 aaPredicted RBP12.8□□□□□ -0.36
HCG27-202ENST00000414008 C1orf141Q5JVX7 400 aa12.8□□□□□ -0.36
HCG27-202ENST00000414008 DESI1Q6ICB0 168 aa12.8□□□□□ -0.36
HCG27-202ENST00000414008 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
HCG27-202ENST00000414008 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
HCG27-202ENST00000414008 ANP32CO43423 234 aa12.79□□□□□ -0.36
HCG27-202ENST00000414008 LILRB3O75022 631 aa12.79□□□□□ -0.36
HCG27-202ENST00000414008 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
HCG27-202ENST00000414008 EZH2Q15910 746 aaKnown RBP12.79□□□□□ -0.36
HCG27-202ENST00000414008 QPCTQ16769 361 aa12.79□□□□□ -0.36
HCG27-202ENST00000414008 CCDC24Q8N4L8 307 aa12.79□□□□□ -0.36
HCG27-202ENST00000414008 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
HCG27-202ENST00000414008 PLA2G2CQ5R387 149 aa12.78□□□□□ -0.36
HCG27-202ENST00000414008 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
HCG27-202ENST00000414008 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
HCG27-202ENST00000414008 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
HCG27-202ENST00000414008 SHANK3Q9BYB0 1731 aa12.77□□□□□ -0.36
HCG27-202ENST00000414008 RPIAP49247 311 aa12.77□□□□□ -0.37
HCG27-202ENST00000414008 MTHFSDQ2M296 383 aaKnown RBP12.77□□□□□ -0.37
HCG27-202ENST00000414008 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
HCG27-202ENST00000414008 MPRIPQ6WCQ1 1025 aa12.77□□□□□ -0.37
HCG27-202ENST00000414008 DCAF5Q96JK2 942 aa12.77□□□□□ -0.37
HCG27-202ENST00000414008 NUDT12Q9BQG2 462 aa12.77□□□□□ -0.37
HCG27-202ENST00000414008 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
HCG27-202ENST00000414008 SBF2Q86WG5 1849 aa12.76□□□□□ -0.37
HCG27-202ENST00000414008 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
HCG27-202ENST00000414008 LIAT1Q6ZQX7 453 aa12.76□□□□□ -0.37
HCG27-202ENST00000414008 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
HCG27-202ENST00000414008 ERVV-2B6SEH9 535 aa12.75□□□□□ -0.37
HCG27-202ENST00000414008 CFAP99D6REC4 459 aa12.75□□□□□ -0.37
HCG27-202ENST00000414008 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
HCG27-202ENST00000414008 PTPRNQ16849 979 aa12.75□□□□□ -0.37
HCG27-202ENST00000414008 NHSQ6T4R5 1651 aa12.75□□□□□ -0.37
HCG27-202ENST00000414008 TSC1Q92574 1164 aa12.75□□□□□ -0.37
HCG27-202ENST00000414008 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
HCG27-202ENST00000414008 PCMTD1Q96MG8 357 aaPredicted RBP12.75□□□□□ -0.37
HCG27-202ENST00000414008 PNNQ9H307 717 aaKnown RBP12.75□□□□□ -0.37
HCG27-202ENST00000414008 NEFMP07197 916 aa12.74□□□□□ -0.37
HCG27-202ENST00000414008 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
HCG27-202ENST00000414008 PROCA1Q8NCQ7 364 aaPredicted RBP12.74□□□□□ -0.37
HCG27-202ENST00000414008 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
HCG27-202ENST00000414008 PIGBQ92521 554 aa12.74□□□□□ -0.37
HCG27-202ENST00000414008 EMID1Q96A84 441 aaPredicted RBP12.74□□□□□ -0.37
HCG27-202ENST00000414008 TMOD3Q9NYL9 352 aa12.74□□□□□ -0.37
HCG27-202ENST00000414008 CCNYL3P0C7X3 344 aa12.73□□□□□ -0.37
HCG27-202ENST00000414008 CABP4P57796 275 aa12.73□□□□□ -0.37
HCG27-202ENST00000414008 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
HCG27-202ENST00000414008 ZNF598Q86UK7 904 aaKnown RBP12.73□□□□□ -0.37
HCG27-202ENST00000414008 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
HCG27-202ENST00000414008 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
HCG27-202ENST00000414008 RNMTO43148 476 aaKnown RBP12.72□□□□□ -0.37
HCG27-202ENST00000414008 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
HCG27-202ENST00000414008 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
HCG27-202ENST00000414008 SMARCC1Q92922 1105 aaPredicted RBP12.72□□□□□ -0.37
HCG27-202ENST00000414008 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
HCG27-202ENST00000414008 IRX2Q9BZI1 471 aaPredicted RBP12.72□□□□□ -0.37
HCG27-202ENST00000414008 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
HCG27-202ENST00000414008 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
HCG27-202ENST00000414008 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
HCG27-202ENST00000414008 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.37
HCG27-202ENST00000414008 SLC27A3Q5K4L6 730 aa12.71□□□□□ -0.37
HCG27-202ENST00000414008 LYPD8Q6UX82 237 aa12.71□□□□□ -0.37
HCG27-202ENST00000414008 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
HCG27-202ENST00000414008 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
HCG27-202ENST00000414008 BTAF1O14981 1849 aa12.7□□□□□ -0.38
HCG27-202ENST00000414008 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
HCG27-202ENST00000414008 ADAMTS8Q9UP79 889 aa12.7□□□□□ -0.38
HCG27-202ENST00000414008 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 CCDC184Q52MB2 194 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 RTF1Q92541 710 aaKnown RBP12.69□□□□□ -0.38
HCG27-202ENST00000414008 SLC52A2Q9HAB3 445 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 ATG3Q9NT62 314 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 EVA1BQ9NVM1 165 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
HCG27-202ENST00000414008 ASAP1Q9ULH1 1129 aa12.69□□□□□ -0.38
HCG27-202ENST00000414008 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
HCG27-202ENST00000414008 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
HCG27-202ENST00000414008 KCNQ4P56696 695 aa12.68□□□□□ -0.38
HCG27-202ENST00000414008 PPP2R2DQ66LE6 453 aa12.68□□□□□ -0.38
HCG27-202ENST00000414008 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
HCG27-202ENST00000414008 RGPD3A6NKT7 1758 aaPredicted RBP12.67□□□□□ -0.38
HCG27-202ENST00000414008 RGPD4Q7Z3J3 1758 aa12.67□□□□□ -0.38
HCG27-202ENST00000414008 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
HCG27-202ENST00000414008 TEFQ10587 303 aa12.67□□□□□ -0.38
HCG27-202ENST00000414008 TRIM32Q13049 653 aa12.67□□□□□ -0.38
HCG27-202ENST00000414008 R3HDM1Q15032 1099 aaKnown RBP12.67□□□□□ -0.38
HCG27-202ENST00000414008 NFE2L2Q16236 605 aa12.67□□□□□ -0.38
HCG27-202ENST00000414008 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
HCG27-202ENST00000414008 CTHP32929 405 aa12.66□□□□□ -0.38
HCG27-202ENST00000414008 SIK1P57059 783 aa12.66□□□□□ -0.38
HCG27-202ENST00000414008 KCNH2Q12809 1159 aa12.66□□□□□ -0.38
HCG27-202ENST00000414008 CCDC146Q8IYE0 955 aa12.66□□□□□ -0.38
HCG27-202ENST00000414008 RUNDC1Q96C34 613 aa12.66□□□□□ -0.38
HCG27-202ENST00000414008 STK32BQ9NY57 414 aa12.66□□□□□ -0.38
HCG27-202ENST00000414008 ITGB4P16144 1822 aa12.66□□□□□ -0.38
HCG27-202ENST00000414008 RREB1Q92766 1687 aa12.65□□□□□ -0.38
HCG27-202ENST00000414008 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms