RNA–Protein interactions for RNA: ENST00000413718.1

LINC00111-201, long intergenic non-protein coding RNA 111, humanhuman

TSL 3 BASIC

Gene LINC00111, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00111-201ENST00000413718 PPP1R42Q7Z4L9 355 aa12.47□□□□□ -0.41
LINC00111-201ENST00000413718 BEGAINQ9BUH8 593 aa12.47□□□□□ -0.41
LINC00111-201ENST00000413718 MCOLN1Q9GZU1 580 aa12.47□□□□□ -0.41
LINC00111-201ENST00000413718 DDX60Q8IY21 1712 aaKnown RBP12.46□□□□□ -0.41
LINC00111-201ENST00000413718 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
LINC00111-201ENST00000413718 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
LINC00111-201ENST00000413718 ZC3H15Q8WU90 426 aaKnown RBP12.46□□□□□ -0.41
LINC00111-201ENST00000413718 NLRP3Q96P20 1036 aa12.46□□□□□ -0.41
LINC00111-201ENST00000413718 ZIC5Q96T25 663 aa12.46□□□□□ -0.41
LINC00111-201ENST00000413718 UTP14AQ9BVJ6 771 aaKnown RBP12.46□□□□□ -0.41
LINC00111-201ENST00000413718 PDE4DIPQ5VU43 2346 aa12.45□□□□□ -0.42
LINC00111-201ENST00000413718 CIAPIN1Q6FI81 312 aa12.45□□□□□ -0.42
LINC00111-201ENST00000413718 SP8Q8IXZ3 490 aa12.45□□□□□ -0.42
LINC00111-201ENST00000413718 CASP8AP2Q9UKL3 1982 aa12.44□□□□□ -0.42
LINC00111-201ENST00000413718 RAD17O75943 681 aa12.44□□□□□ -0.42
LINC00111-201ENST00000413718 ANXA1P04083 346 aa12.44□□□□□ -0.42
LINC00111-201ENST00000413718 GRAPQ13588 217 aa12.44□□□□□ -0.42
LINC00111-201ENST00000413718 DPP8Q6V1X1 898 aaPredicted RBP12.44□□□□□ -0.42
LINC00111-201ENST00000413718 NLRP10Q86W26 655 aa12.44□□□□□ -0.42
LINC00111-201ENST00000413718 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
LINC00111-201ENST00000413718 TAF1P21675 1872 aa12.43□□□□□ -0.42
LINC00111-201ENST00000413718 FAM155AB1AL88 458 aaPredicted RBP12.43□□□□□ -0.42
LINC00111-201ENST00000413718 BBOX1O75936 387 aa12.43□□□□□ -0.42
LINC00111-201ENST00000413718 HCLS1P14317 486 aaPredicted RBP12.43□□□□□ -0.42
LINC00111-201ENST00000413718 MPNDQ8N594 471 aa12.43□□□□□ -0.42
LINC00111-201ENST00000413718 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
LINC00111-201ENST00000413718 EGFRP00533 1210 aa12.42□□□□□ -0.42
LINC00111-201ENST00000413718 NOGQ13253 232 aa12.42□□□□□ -0.42
LINC00111-201ENST00000413718 DLK2Q6UY11 383 aa12.42□□□□□ -0.42
LINC00111-201ENST00000413718 CDC37L1Q7L3B6 337 aa12.42□□□□□ -0.42
LINC00111-201ENST00000413718 MICALL2Q8IY33 904 aa12.42□□□□□ -0.42
LINC00111-201ENST00000413718 TSPYL4Q9UJ04 414 aa12.42□□□□□ -0.42
LINC00111-201ENST00000413718 ZNF609O15014 1411 aa12.42□□□□□ -0.42
LINC00111-201ENST00000413718 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
LINC00111-201ENST00000413718 TNIP1Q15025 636 aa12.41□□□□□ -0.42
LINC00111-201ENST00000413718 ZNF408Q9H9D4 720 aa12.41□□□□□ -0.42
LINC00111-201ENST00000413718 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
LINC00111-201ENST00000413718 CNOT7Q9UIV1 285 aaKnown RBP12.41□□□□□ -0.42
LINC00111-201ENST00000413718 SCN9AQ15858 1988 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 PSMD14O00487 310 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 HUNKP57058 714 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 TCIRG1Q13488 830 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 DGKZQ13574 1117 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 HSP90AB3PQ58FF7 597 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 COPS6Q7L5N1 327 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 TMC4Q7Z404 712 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 DPF2Q92785 391 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 BCL2L13Q9BXK5 485 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 SAGE1Q9NXZ1 904 aa12.4□□□□□ -0.42
LINC00111-201ENST00000413718 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
LINC00111-201ENST00000413718 EIF2S2P20042 333 aaKnown RBP12.39□□□□□ -0.43
LINC00111-201ENST00000413718 DDX46Q7L014 1031 aaKnown RBP12.39□□□□□ -0.43
LINC00111-201ENST00000413718 SAMD7Q7Z3H4 446 aa12.39□□□□□ -0.43
LINC00111-201ENST00000413718 USP48Q86UV5 1035 aa12.39□□□□□ -0.43
LINC00111-201ENST00000413718 TMX4Q9H1E5 349 aaPredicted RBP12.39□□□□□ -0.43
LINC00111-201ENST00000413718 MAPK8IP3Q9UPT6 1336 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 ADM5C9JUS6 153 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 NEFMP07197 916 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 KRT24Q2M2I5 525 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 RGMBQ6NW40 437 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 CELF1Q92879 486 aaKnown RBP12.38□□□□□ -0.43
LINC00111-201ENST00000413718 DBNDD1Q9H9R9 158 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 POLLQ9UGP5 575 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 TRMT112Q9UI30 125 aaKnown RBP12.38□□□□□ -0.43
LINC00111-201ENST00000413718 HTTP42858 3142 aa12.38□□□□□ -0.43
LINC00111-201ENST00000413718 H7C1D1 291 aa12.37□□□□□ -0.43
LINC00111-201ENST00000413718 SLC10A3P09131 477 aa12.37□□□□□ -0.43
LINC00111-201ENST00000413718 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
LINC00111-201ENST00000413718 SF3B3Q15393 1217 aaKnown RBP12.37□□□□□ -0.43
LINC00111-201ENST00000413718 TBC1D10BQ4KMP7 808 aaPredicted RBP12.37□□□□□ -0.43
LINC00111-201ENST00000413718 ISCA1Q9BUE6 129 aa12.37□□□□□ -0.43
LINC00111-201ENST00000413718 GBA2Q9HCG7 927 aaPredicted RBP12.37□□□□□ -0.43
LINC00111-201ENST00000413718 ECE2O60344 883 aa12.36□□□□□ -0.43
LINC00111-201ENST00000413718 GPSM2P81274 684 aa12.36□□□□□ -0.43
LINC00111-201ENST00000413718 AIMP1Q12904 312 aaKnown RBP12.36□□□□□ -0.43
LINC00111-201ENST00000413718 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
LINC00111-201ENST00000413718 KCNQ5Q9NR82 932 aa12.36□□□□□ -0.43
LINC00111-201ENST00000413718 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
LINC00111-201ENST00000413718 PSME4Q14997 1843 aa12.36□□□□□ -0.43
LINC00111-201ENST00000413718 ASTN2O75129 1339 aaPredicted RBP12.36□□□□□ -0.43
LINC00111-201ENST00000413718 PAPPA2Q9BXP8 1791 aa12.35□□□□□ -0.43
LINC00111-201ENST00000413718 ZNF646O15015 1829 aaPredicted RBP12.35□□□□□ -0.43
LINC00111-201ENST00000413718 CHL1O00533 1208 aa12.35□□□□□ -0.43
LINC00111-201ENST00000413718 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
LINC00111-201ENST00000413718 RIPK4P57078 832 aa12.35□□□□□ -0.43
LINC00111-201ENST00000413718 KIF23Q02241 960 aaPredicted RBP12.35□□□□□ -0.43
LINC00111-201ENST00000413718 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
LINC00111-201ENST00000413718 NECTIN2Q92692 538 aa12.35□□□□□ -0.43
LINC00111-201ENST00000413718 RNF186Q9NXI6 227 aa12.35□□□□□ -0.43
LINC00111-201ENST00000413718 GGA3Q9NZ52 723 aa12.35□□□□□ -0.43
LINC00111-201ENST00000413718 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
LINC00111-201ENST00000413718 RASAL3Q86YV0 1011 aa12.34□□□□□ -0.43
LINC00111-201ENST00000413718 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
LINC00111-201ENST00000413718 TBC1D16Q8TBP0 767 aa12.34□□□□□ -0.43
LINC00111-201ENST00000413718 CCDC102AQ96A19 550 aa12.34□□□□□ -0.43
LINC00111-201ENST00000413718 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
LINC00111-201ENST00000413718 PNNQ9H307 717 aaKnown RBP12.34□□□□□ -0.43
LINC00111-201ENST00000413718 PODXL2Q9NZ53 605 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms