RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 PDCL3Q9H2J4 239 aa17.8■□□□□ 0.44
TTC39A-208ENST00000413473 FPGT-TNNI3KV9GXZ4 949 aa17.8■□□□□ 0.44
TTC39A-208ENST00000413473 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
TTC39A-208ENST00000413473 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
TTC39A-208ENST00000413473 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
TTC39A-208ENST00000413473 GLIPR1L2Q4G1C9 344 aa17.79■□□□□ 0.44
TTC39A-208ENST00000413473 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
TTC39A-208ENST00000413473 LRP10Q7Z4F1 713 aa17.79■□□□□ 0.44
TTC39A-208ENST00000413473 PROSER2Q86WR7 435 aaPredicted RBP17.79■□□□□ 0.44
TTC39A-208ENST00000413473 CHGBP05060 677 aa17.79■□□□□ 0.44
TTC39A-208ENST00000413473 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
TTC39A-208ENST00000413473 KLHL34Q8N239 644 aa17.79■□□□□ 0.44
TTC39A-208ENST00000413473 TFIP11Q9UBB9 837 aaKnown RBP17.79■□□□□ 0.44
TTC39A-208ENST00000413473 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 AP5Z1O43299 807 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 PTCD1O75127 700 aaKnown RBP17.78■□□□□ 0.44
TTC39A-208ENST00000413473 LIG1P18858 919 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 USPL1Q5W0Q7 1092 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 SASS6Q6UVJ0 657 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 IFNL2Q8IZJ0 200 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 FAM13BQ9NYF5 915 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 TTC5Q8N0Z6 440 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 COL15A1P39059 1388 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 JCADQ9P266 1359 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 C5P01031 1676 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 LMTK3Q96Q04 1460 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 ELP1O95163 1332 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 CAMK4Q16566 473 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 DNTTIP2Q5QJE6 756 aaKnown RBP17.78■□□□□ 0.44
TTC39A-208ENST00000413473 PIBF1Q8WXW3 757 aa17.78■□□□□ 0.44
TTC39A-208ENST00000413473 DNAJC2Q99543 621 aaKnown RBP17.78■□□□□ 0.44
TTC39A-208ENST00000413473 CCDC129Q6ZRS4 1044 aa17.77■□□□□ 0.44
TTC39A-208ENST00000413473 SEC62Q99442 399 aaKnown RBP17.77■□□□□ 0.44
TTC39A-208ENST00000413473 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.44
TTC39A-208ENST00000413473 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.43
TTC39A-208ENST00000413473 KRT32Q14532 448 aa17.77■□□□□ 0.43
TTC39A-208ENST00000413473 NOLC1Q14978 699 aaKnown RBP eCLIP17.77■□□□□ 0.43
TTC39A-208ENST00000413473 NEK1Q96PY6 1258 aa17.77■□□□□ 0.43
TTC39A-208ENST00000413473 TRPM3Q9HCF6 1732 aaPredicted RBP17.77■□□□□ 0.43
TTC39A-208ENST00000413473 MRC1P22897 1456 aa17.76■□□□□ 0.43
TTC39A-208ENST00000413473 A0A087WZG4 1122 aa17.76■□□□□ 0.43
TTC39A-208ENST00000413473 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
TTC39A-208ENST00000413473 C17orf53Q8N3J3 647 aaPredicted RBP17.76■□□□□ 0.43
TTC39A-208ENST00000413473 SCAND2PQ9GZW5 306 aaPredicted RBP17.76■□□□□ 0.43
TTC39A-208ENST00000413473 NUP62CLQ9H1M0 184 aa17.76■□□□□ 0.43
TTC39A-208ENST00000413473 MAP3K11Q16584 847 aa17.76■□□□□ 0.43
TTC39A-208ENST00000413473 SPATA32Q96LK8 384 aa17.76■□□□□ 0.43
TTC39A-208ENST00000413473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.76■□□□□ 0.43
TTC39A-208ENST00000413473 SCN11AQ9UI33 1791 aa17.76■□□□□ 0.43
TTC39A-208ENST00000413473 GOLGA6L4A6NEF3 574 aa17.75■□□□□ 0.43
TTC39A-208ENST00000413473 JAK2O60674 1132 aa17.75■□□□□ 0.43
TTC39A-208ENST00000413473 DDX17Q92841 729 aaKnown RBP17.75■□□□□ 0.43
TTC39A-208ENST00000413473 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
TTC39A-208ENST00000413473 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
TTC39A-208ENST00000413473 C1orf167Q5SNV9 1468 aa17.75■□□□□ 0.43
TTC39A-208ENST00000413473 CYP27B1O15528 508 aa17.75■□□□□ 0.43
TTC39A-208ENST00000413473 DCAF5Q96JK2 942 aa17.75■□□□□ 0.43
TTC39A-208ENST00000413473 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
TTC39A-208ENST00000413473 MEGF6O75095 1541 aa17.74■□□□□ 0.43
TTC39A-208ENST00000413473 Q6ZUG5 572 aa17.74■□□□□ 0.43
TTC39A-208ENST00000413473 DDX46Q7L014 1031 aaKnown RBP17.74■□□□□ 0.43
TTC39A-208ENST00000413473 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
TTC39A-208ENST00000413473 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
TTC39A-208ENST00000413473 DYNC1I1O14576 645 aa17.74■□□□□ 0.43
TTC39A-208ENST00000413473 CYP21A2P08686 494 aa17.74■□□□□ 0.43
TTC39A-208ENST00000413473 MCMDC2Q4G0Z9 681 aa17.74■□□□□ 0.43
TTC39A-208ENST00000413473 LEO1Q8WVC0 666 aaPredicted RBP17.74■□□□□ 0.43
TTC39A-208ENST00000413473 GTF3C6Q969F1 213 aa17.74■□□□□ 0.43
TTC39A-208ENST00000413473 HAUS7Q99871 368 aa17.74■□□□□ 0.43
TTC39A-208ENST00000413473 ZNF609O15014 1411 aa17.73■□□□□ 0.43
TTC39A-208ENST00000413473 LMBR1LQ6UX01 489 aa17.73■□□□□ 0.43
TTC39A-208ENST00000413473 CKAP2LQ8IYA6 745 aa17.73■□□□□ 0.43
TTC39A-208ENST00000413473 CABLES1Q8TDN4 633 aa17.73■□□□□ 0.43
TTC39A-208ENST00000413473 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
TTC39A-208ENST00000413473 TYRO3Q06418 890 aa17.73■□□□□ 0.43
TTC39A-208ENST00000413473 FAM200AQ8TCP9 573 aa17.73■□□□□ 0.43
TTC39A-208ENST00000413473 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
TTC39A-208ENST00000413473 CHRNA2Q15822 529 aa17.72■□□□□ 0.43
TTC39A-208ENST00000413473 SPC24Q8NBT2 197 aa17.72■□□□□ 0.43
TTC39A-208ENST00000413473 LRRC2Q9BYS8 371 aa17.72■□□□□ 0.43
TTC39A-208ENST00000413473 TNMDQ9H2S6 317 aa17.72■□□□□ 0.43
TTC39A-208ENST00000413473 MRVI1Q9Y6F6 885 aa17.72■□□□□ 0.43
TTC39A-208ENST00000413473 CASP7P55210 303 aa17.72■□□□□ 0.43
TTC39A-208ENST00000413473 BRF1Q92994 677 aa17.72■□□□□ 0.43
TTC39A-208ENST00000413473 DDX11Q96FC9 970 aa17.72■□□□□ 0.43
TTC39A-208ENST00000413473 CABP4P57796 275 aa17.71■□□□□ 0.43
TTC39A-208ENST00000413473 PLBD2Q8NHP8 589 aa17.71■□□□□ 0.43
TTC39A-208ENST00000413473 LUZP1Q86V48 1076 aa17.71■□□□□ 0.42
TTC39A-208ENST00000413473 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.42
TTC39A-208ENST00000413473 FGD1P98174 961 aa17.7■□□□□ 0.42
TTC39A-208ENST00000413473 KBTBD3Q8NAB2 608 aa17.7■□□□□ 0.42
TTC39A-208ENST00000413473 PGBD1Q96JS3 809 aa17.7■□□□□ 0.42
TTC39A-208ENST00000413473 SPTLC3Q9NUV7 552 aa17.7■□□□□ 0.42
TTC39A-208ENST00000413473 H3BQV1 296 aa17.7■□□□□ 0.42
TTC39A-208ENST00000413473 SLFNL1Q499Z3 407 aa17.7■□□□□ 0.42
TTC39A-208ENST00000413473 IFFO2Q5TF58 517 aa17.7■□□□□ 0.42
TTC39A-208ENST00000413473 KCNF1Q9H3M0 494 aa17.7■□□□□ 0.42
TTC39A-208ENST00000413473 RFX7Q2KHR2 1363 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 MST1RQ04912 1400 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms