RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 FOXO4P98177 505 aa9.79□□□□□ -0.84
CSTF2-202ENST00000413437 TTLL11Q8NHH1 800 aa9.79□□□□□ -0.84
CSTF2-202ENST00000413437 SUCLG2Q96I99 432 aa9.79□□□□□ -0.84
CSTF2-202ENST00000413437 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
CSTF2-202ENST00000413437 USP44Q9H0E7 712 aa9.79□□□□□ -0.84
CSTF2-202ENST00000413437 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
CSTF2-202ENST00000413437 WTIPA6NIX2 430 aaPredicted RBP9.78□□□□□ -0.84
CSTF2-202ENST00000413437 GRM8O00222 908 aa9.78□□□□□ -0.84
CSTF2-202ENST00000413437 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
CSTF2-202ENST00000413437 PLIN1O60240 522 aa9.78□□□□□ -0.84
CSTF2-202ENST00000413437 ALDH1L1O75891 902 aa9.78□□□□□ -0.84
CSTF2-202ENST00000413437 RLBP1P12271 317 aa9.78□□□□□ -0.84
CSTF2-202ENST00000413437 ALDH1B1P30837 517 aa9.78□□□□□ -0.84
CSTF2-202ENST00000413437 CTSWP56202 376 aa9.78□□□□□ -0.84
CSTF2-202ENST00000413437 GREM2Q9H772 168 aa9.78□□□□□ -0.84
CSTF2-202ENST00000413437 SNED1Q8TER0 1413 aa9.77□□□□□ -0.85
CSTF2-202ENST00000413437 CSF1RP07333 972 aa9.77□□□□□ -0.85
CSTF2-202ENST00000413437 GRAPQ13588 217 aa9.77□□□□□ -0.85
CSTF2-202ENST00000413437 DDX46Q7L014 1031 aaKnown RBP9.77□□□□□ -0.85
CSTF2-202ENST00000413437 TMEM57Q8N5G2 664 aa9.77□□□□□ -0.85
CSTF2-202ENST00000413437 GRAPLQ8TC17 118 aaPredicted RBP9.77□□□□□ -0.85
CSTF2-202ENST00000413437 PLA2G12BQ9BX93 195 aa9.77□□□□□ -0.85
CSTF2-202ENST00000413437 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
CSTF2-202ENST00000413437 C9orf78Q9NZ63 289 aaPredicted RBP9.77□□□□□ -0.85
CSTF2-202ENST00000413437 FER1L6Q2WGJ9 1857 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 FAM161AQ3B820 660 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 ZKSCAN2Q63HK3 967 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 LMBR1LQ6UX01 489 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 ATF7IPQ6VMQ6 1270 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 ANKRD44Q8N8A2 993 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 PANK1Q8TE04 598 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 ARHGAP45Q92619 1136 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 ZNF594Q96JF6 807 aaPredicted RBP9.76□□□□□ -0.85
CSTF2-202ENST00000413437 MEIS3Q99687 375 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 RCAN3Q9UKA8 241 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 SBF1O95248 1867 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 UTYO14607 1347 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 KIF16BQ96L93 1317 aa9.76□□□□□ -0.85
CSTF2-202ENST00000413437 SPEF2Q9C093 1822 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 BBOX1O75936 387 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 YY1P25490 414 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 CCT4P50991 539 aaKnown RBP9.75□□□□□ -0.85
CSTF2-202ENST00000413437 RPS8P62241 208 aaKnown RBP9.75□□□□□ -0.85
CSTF2-202ENST00000413437 GPSM2P81274 684 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 CCDC152Q4G0S7 254 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 C20orf194Q5TEA3 1177 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 INTS3Q68E01 1043 aaKnown RBP9.75□□□□□ -0.85
CSTF2-202ENST00000413437 SP8Q8IXZ3 490 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 GPR101Q96P66 508 aaPredicted RBP9.75□□□□□ -0.85
CSTF2-202ENST00000413437 BICC1Q9H694 974 aaKnown RBP9.75□□□□□ -0.85
CSTF2-202ENST00000413437 ZNF277Q9NRM2 450 aaPredicted RBP9.75□□□□□ -0.85
CSTF2-202ENST00000413437 ATP6V0A2Q9Y487 856 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 CHD4Q14839 1912 aa9.75□□□□□ -0.85
CSTF2-202ENST00000413437 COL4A5P29400 1685 aa9.74□□□□□ -0.85
CSTF2-202ENST00000413437 MYH3P11055 1940 aa9.74□□□□□ -0.85
CSTF2-202ENST00000413437 IPO8O15397 1037 aaKnown RBP9.74□□□□□ -0.85
CSTF2-202ENST00000413437 ITGA6P23229 1130 aa9.74□□□□□ -0.85
CSTF2-202ENST00000413437 CCDC93Q567U6 631 aa9.74□□□□□ -0.85
CSTF2-202ENST00000413437 RNF181Q9P0P0 153 aa9.74□□□□□ -0.85
CSTF2-202ENST00000413437 CHMP3Q9Y3E7 222 aa9.74□□□□□ -0.85
CSTF2-202ENST00000413437 DUOX1Q9NRD9 1551 aa9.73□□□□□ -0.85
CSTF2-202ENST00000413437 SNAP23O00161 211 aa9.73□□□□□ -0.85
CSTF2-202ENST00000413437 FKBP4Q02790 459 aaKnown RBP eCLIP9.73□□□□□ -0.85
CSTF2-202ENST00000413437 DZIP1LQ8IYY4 767 aaKnown RBP9.73□□□□□ -0.85
CSTF2-202ENST00000413437 KLHDC4Q8TBB5 520 aa9.73□□□□□ -0.85
CSTF2-202ENST00000413437 PUS3Q9BZE2 481 aaKnown RBP9.73□□□□□ -0.85
CSTF2-202ENST00000413437 TAOK3Q9H2K8 898 aa9.73□□□□□ -0.85
CSTF2-202ENST00000413437 LRRFIP2Q9Y608 721 aaKnown RBP9.73□□□□□ -0.85
CSTF2-202ENST00000413437 LRRC37AA6NMS7 1700 aa9.73□□□□□ -0.85
CSTF2-202ENST00000413437 LMNB1P20700 586 aa9.72□□□□□ -0.85
CSTF2-202ENST00000413437 ANKRD18AQ8IVF6 992 aa9.72□□□□□ -0.85
CSTF2-202ENST00000413437 RTKN2Q8IZC4 609 aa9.72□□□□□ -0.85
CSTF2-202ENST00000413437 MPNDQ8N594 471 aa9.72□□□□□ -0.85
CSTF2-202ENST00000413437 HELBQ8NG08 1087 aaPredicted RBP9.72□□□□□ -0.85
CSTF2-202ENST00000413437 ZNF526Q8TF50 670 aaPredicted RBP9.72□□□□□ -0.85
CSTF2-202ENST00000413437 POLLQ9UGP5 575 aa9.72□□□□□ -0.85
CSTF2-202ENST00000413437 MINPP1Q9UNW1 487 aa9.72□□□□□ -0.85
CSTF2-202ENST00000413437 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
CSTF2-202ENST00000413437 LTBP3Q9NS15 1303 aa9.72□□□□□ -0.85
CSTF2-202ENST00000413437 RTL9Q8NET4 1388 aa9.72□□□□□ -0.85
CSTF2-202ENST00000413437 ANKRD18BA2A2Z9 1011 aa9.71□□□□□ -0.86
CSTF2-202ENST00000413437 UBTFL1P0CB47 393 aaPredicted RBP9.71□□□□□ -0.86
CSTF2-202ENST00000413437 HSP90B1P14625 803 aaKnown RBP9.71□□□□□ -0.86
CSTF2-202ENST00000413437 IARSP41252 1262 aaKnown RBP9.71□□□□□ -0.86
CSTF2-202ENST00000413437 RFX5P48382 616 aaPredicted RBP9.71□□□□□ -0.86
CSTF2-202ENST00000413437 AOC3Q16853 763 aa9.71□□□□□ -0.86
CSTF2-202ENST00000413437 RABL6Q3YEC7 729 aaPredicted RBP9.71□□□□□ -0.86
CSTF2-202ENST00000413437 SOGA3Q5TF21 947 aa9.71□□□□□ -0.86
CSTF2-202ENST00000413437 DPP8Q6V1X1 898 aaPredicted RBP9.71□□□□□ -0.86
CSTF2-202ENST00000413437 C1orf115Q9H7X2 142 aa9.71□□□□□ -0.86
CSTF2-202ENST00000413437 LTBP1Q14766 1721 aa9.7□□□□□ -0.86
CSTF2-202ENST00000413437 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
CSTF2-202ENST00000413437 ZBTB7BO15156 539 aaPredicted RBP9.7□□□□□ -0.86
CSTF2-202ENST00000413437 TAF5LO75529 589 aa9.7□□□□□ -0.86
CSTF2-202ENST00000413437 IFIT5Q13325 482 aaKnown RBP9.7□□□□□ -0.86
CSTF2-202ENST00000413437 LRRC24Q50LG9 513 aa9.7□□□□□ -0.86
CSTF2-202ENST00000413437 CC2D2BQ6DHV5 1058 aa9.7□□□□□ -0.86
CSTF2-202ENST00000413437 ITPRIPQ8IWB1 547 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms