RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 ANKRD62A6NC57 917 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 GNRH1P01148 92 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 IGHA2P01877 340 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
NOD1-203ENST00000413433 HSPA2P54652 639 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 FOXK2Q01167 660 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 DNM1Q05193 864 aaKnown RBP8.2□□□□□ -1.1
NOD1-203ENST00000413433 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 DHX38Q92620 1227 aaKnown RBP8.2□□□□□ -1.1
NOD1-203ENST00000413433 MYO19Q96H55 970 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 CDK15Q96Q40 435 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 SETDB2Q96T68 719 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 ACBD3Q9H3P7 528 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 QTRT2Q9H974 415 aaKnown RBP8.2□□□□□ -1.1
NOD1-203ENST00000413433 TMPRSS4Q9NRS4 437 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 CUEDC1Q9NWM3 386 aaPredicted RBP8.2□□□□□ -1.1
NOD1-203ENST00000413433 POLIQ9UNA4 740 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.2□□□□□ -1.1
NOD1-203ENST00000413433 KIF21BO75037 1637 aa8.2□□□□□ -1.1
NOD1-203ENST00000413433 UPP2O95045 317 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 ZIC2O95409 532 aaPredicted RBP8.19□□□□□ -1.1
NOD1-203ENST00000413433 NR3C2P08235 984 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 PCSK2P16519 638 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 MZF1P28698 734 aaPredicted RBP8.19□□□□□ -1.1
NOD1-203ENST00000413433 SMTNP53814 917 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 C6orf118Q5T5N4 469 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 GIMAP6Q6P9H5 292 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 NOP9Q86U38 636 aaKnown RBP8.19□□□□□ -1.1
NOD1-203ENST00000413433 ZNF784Q8NCA9 323 aaPredicted RBP8.19□□□□□ -1.1
NOD1-203ENST00000413433 FBF1Q8TES7 1133 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 CRELD1Q96HD1 420 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 LNPKQ9C0E8 428 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 IQSEC3Q9UPP2 1182 aaPredicted RBP8.19□□□□□ -1.1
NOD1-203ENST00000413433 TMA7Q9Y2S6 64 aaKnown RBP8.19□□□□□ -1.1
NOD1-203ENST00000413433 PTPRMP28827 1452 aa8.19□□□□□ -1.1
NOD1-203ENST00000413433 NUP153P49790 1475 aaKnown RBP8.19□□□□□ -1.1
NOD1-203ENST00000413433 GRM5P41594 1212 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 ANKRD13AQ8IZ07 590 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 GJD3Q8N144 294 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 TTC16Q8NEE8 873 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 EDEM1Q92611 657 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 ARMC5Q96C12 935 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 RAB6BQ9NRW1 208 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 LRFN2Q9ULH4 789 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 PHLDB1Q86UU1 1377 aa8.18□□□□□ -1.1
NOD1-203ENST00000413433 KRT76Q01546 638 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 MTFR1Q15390 333 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 TLR1Q15399 786 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 GPAT2Q6NUI2 795 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 FBXO41Q8TF61 875 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 FRMD6Q96NE9 622 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 ZFAND3Q9H8U3 227 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 ZNF232Q9UNY5 417 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 SPG7Q9UQ90 795 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 INPP5FQ9Y2H2 1132 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 EMILIN1Q9Y6C2 1016 aa8.17□□□□□ -1.1
NOD1-203ENST00000413433 ZBTB39O15060 712 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 NEFLP07196 543 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 BMP2P12643 396 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 TNNI2P48788 182 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 AKNAQ7Z591 1439 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 RAPGEF6Q8TEU7 1601 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 NEO1Q92859 1461 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 CSRNP1Q96S65 589 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 HIRIP3Q9BW71 556 aaPredicted RBP8.16□□□□□ -1.1
NOD1-203ENST00000413433 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
NOD1-203ENST00000413433 SAMD9Q5K651 1589 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 DENND4BO75064 1496 aaPredicted RBP8.15□□□□□ -1.1
NOD1-203ENST00000413433 SERTM1A2A2V5 107 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 PDGFAP04085 211 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 ZAP70P43403 619 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 ARID5AQ03989 594 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 NR5A1Q13285 461 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 DGKZQ13574 1117 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 PMFBP1Q8TBY8 1022 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 AK5Q9Y6K8 562 aa8.15□□□□□ -1.1
NOD1-203ENST00000413433 YEATS2Q9ULM3 1422 aa8.14□□□□□ -1.11
NOD1-203ENST00000413433 EIF4BP23588 611 aaKnown RBP8.14□□□□□ -1.11
NOD1-203ENST00000413433 CEBPAP49715 358 aaPredicted RBP8.14□□□□□ -1.11
NOD1-203ENST00000413433 RTN1Q16799 776 aa8.14□□□□□ -1.11
NOD1-203ENST00000413433 C11orf91Q3C1V1 193 aa8.14□□□□□ -1.11
NOD1-203ENST00000413433 CCDC116Q8IYX3 515 aa8.14□□□□□ -1.11
NOD1-203ENST00000413433 ZNF654Q8IZM8 581 aa8.14□□□□□ -1.11
NOD1-203ENST00000413433 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
NOD1-203ENST00000413433 GPR161Q8N6U8 529 aaKnown RBP8.14□□□□□ -1.11
NOD1-203ENST00000413433 FANCAO15360 1455 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 SOS2Q07890 1332 aaPredicted RBP8.13□□□□□ -1.11
NOD1-203ENST00000413433 CDK2AP1O14519 115 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 CCDC144BQ3MJ40 725 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 C8orf34Q49A92 452 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 ZNF385CQ66K41 422 aaPredicted RBP8.13□□□□□ -1.11
NOD1-203ENST00000413433 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 HS2ST1Q7LGA3 356 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 USP48Q86UV5 1035 aa8.13□□□□□ -1.11
NOD1-203ENST00000413433 VPS37DQ86XT2 251 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms