RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 NBPF5PQ86XG9 351 aaPredicted RBP14.53□□□□□ -0.08
HDAC9-206ENST00000413380 ANKRD44Q8N8A2 993 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 MTFR1LQ9H019 292 aa14.53□□□□□ -0.08
HDAC9-206ENST00000413380 BICC1Q9H694 974 aaKnown RBP14.53□□□□□ -0.08
HDAC9-206ENST00000413380 PDE8AO60658 829 aa14.52□□□□□ -0.09
HDAC9-206ENST00000413380 HDAC1Q13547 482 aaPredicted RBP14.52□□□□□ -0.09
HDAC9-206ENST00000413380 EPHA10Q5JZY3 1008 aa14.52□□□□□ -0.09
HDAC9-206ENST00000413380 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.09
HDAC9-206ENST00000413380 SYNE4Q8N205 404 aa14.52□□□□□ -0.09
HDAC9-206ENST00000413380 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
HDAC9-206ENST00000413380 C1orf115Q9H7X2 142 aa14.52□□□□□ -0.09
HDAC9-206ENST00000413380 COL11A2P13942 1736 aaPredicted RBP14.52□□□□□ -0.09
HDAC9-206ENST00000413380 C10orf71Q711Q0 1435 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 KLRG2A4D1S0 409 aaPredicted RBP14.51□□□□□ -0.09
HDAC9-206ENST00000413380 CTSWP56202 376 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 ATP8B2P98198 1209 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 ERFEQ4G0M1 354 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 NUTM1Q86Y26 1132 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 SSH3Q8TE77 659 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 SGIP1Q9BQI5 828 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 PPP4R2Q9NY27 417 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 PARP3Q9Y6F1 533 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 KIAA1551Q9HCM1 1747 aa14.51□□□□□ -0.09
HDAC9-206ENST00000413380 SF3B3Q15393 1217 aaKnown RBP14.5□□□□□ -0.09
HDAC9-206ENST00000413380 MSL1Q68DK7 614 aa14.5□□□□□ -0.09
HDAC9-206ENST00000413380 JARID2Q92833 1246 aaPredicted RBP14.5□□□□□ -0.09
HDAC9-206ENST00000413380 ST5P78524 1137 aa14.49□□□□□ -0.09
HDAC9-206ENST00000413380 CRY2Q49AN0 593 aa14.49□□□□□ -0.09
HDAC9-206ENST00000413380 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
HDAC9-206ENST00000413380 TTLL11Q8NHH1 800 aa14.49□□□□□ -0.09
HDAC9-206ENST00000413380 A0A1B0GUL6 1792 aa14.49□□□□□ -0.09
HDAC9-206ENST00000413380 TAF1P21675 1872 aa14.48□□□□□ -0.09
HDAC9-206ENST00000413380 SPEF2Q9C093 1822 aa14.48□□□□□ -0.09
HDAC9-206ENST00000413380 PNMA6EA0A0J9YXQ4 647 aa14.48□□□□□ -0.09
HDAC9-206ENST00000413380 FAM177BA6PVY3 158 aa14.48□□□□□ -0.09
HDAC9-206ENST00000413380 HMMRO75330 724 aa14.48□□□□□ -0.09
HDAC9-206ENST00000413380 HCLS1P14317 486 aaPredicted RBP14.48□□□□□ -0.09
HDAC9-206ENST00000413380 RFX5P48382 616 aaPredicted RBP14.48□□□□□ -0.09
HDAC9-206ENST00000413380 LMBR1LQ6UX01 489 aa14.48□□□□□ -0.09
HDAC9-206ENST00000413380 BRIP1Q9BX63 1249 aa14.48□□□□□ -0.09
HDAC9-206ENST00000413380 GTF3C3Q9Y5Q9 886 aa14.48□□□□□ -0.09
HDAC9-206ENST00000413380 BRCA1P38398 1863 aaKnown RBP14.48□□□□□ -0.09
HDAC9-206ENST00000413380 KDM2BQ8NHM5 1336 aa14.47□□□□□ -0.09
HDAC9-206ENST00000413380 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
HDAC9-206ENST00000413380 GTF2E1P29083 439 aaPredicted RBP14.47□□□□□ -0.09
HDAC9-206ENST00000413380 PTGER2P43116 358 aa14.47□□□□□ -0.09
HDAC9-206ENST00000413380 CCDC152Q4G0S7 254 aa14.47□□□□□ -0.09
HDAC9-206ENST00000413380 NLRP3Q96P20 1036 aa14.47□□□□□ -0.09
HDAC9-206ENST00000413380 LRRC37AA6NMS7 1700 aa14.46□□□□□ -0.09
HDAC9-206ENST00000413380 SRGAP3O43295 1099 aa14.46□□□□□ -0.09
HDAC9-206ENST00000413380 ZBTB7AO95365 584 aa14.46□□□□□ -0.09
HDAC9-206ENST00000413380 C3orf67Q6ZVT6 689 aa14.46□□□□□ -0.09
HDAC9-206ENST00000413380 COPRSQ9NQ92 184 aa14.46□□□□□ -0.09
HDAC9-206ENST00000413380 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.09
HDAC9-206ENST00000413380 NOP58Q9Y2X3 529 aaKnown RBP14.46□□□□□ -0.09
HDAC9-206ENST00000413380 COL4A1P02462 1669 aa14.46□□□□□ -0.1
HDAC9-206ENST00000413380 POLD1P28340 1107 aa14.45□□□□□ -0.1
HDAC9-206ENST00000413380 PTPN12Q05209 780 aaKnown RBP14.45□□□□□ -0.1
HDAC9-206ENST00000413380 FAM161AQ3B820 660 aa14.45□□□□□ -0.1
HDAC9-206ENST00000413380 SMC5Q8IY18 1101 aa14.45□□□□□ -0.1
HDAC9-206ENST00000413380 RWDD1Q9H446 243 aaPredicted RBP14.45□□□□□ -0.1
HDAC9-206ENST00000413380 GREM2Q9H772 168 aa14.45□□□□□ -0.1
HDAC9-206ENST00000413380 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
HDAC9-206ENST00000413380 IGHDP01880 384 aa14.44□□□□□ -0.1
HDAC9-206ENST00000413380 HOXA10P31260 410 aaPredicted RBP14.44□□□□□ -0.1
HDAC9-206ENST00000413380 CCDC136Q96JN2 1154 aa14.44□□□□□ -0.1
HDAC9-206ENST00000413380 DCTPP1Q9H773 170 aa14.44□□□□□ -0.1
HDAC9-206ENST00000413380 CACNA1SQ13698 1873 aa14.44□□□□□ -0.1
HDAC9-206ENST00000413380 NPHP1O15259 732 aa14.43□□□□□ -0.1
HDAC9-206ENST00000413380 ITGA6P23229 1130 aa14.43□□□□□ -0.1
HDAC9-206ENST00000413380 PDE6BP35913 854 aa14.43□□□□□ -0.1
HDAC9-206ENST00000413380 IFIT5Q13325 482 aaKnown RBP14.43□□□□□ -0.1
HDAC9-206ENST00000413380 GCC1Q96CN9 775 aa14.43□□□□□ -0.1
HDAC9-206ENST00000413380 ANKRD18BA2A2Z9 1011 aa14.42□□□□□ -0.1
HDAC9-206ENST00000413380 CIAO1O76071 339 aa14.42□□□□□ -0.1
HDAC9-206ENST00000413380 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
HDAC9-206ENST00000413380 CENPQQ7L2Z9 268 aaPredicted RBP14.42□□□□□ -0.1
HDAC9-206ENST00000413380 CCDC24Q8N4L8 307 aa14.42□□□□□ -0.1
HDAC9-206ENST00000413380 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
HDAC9-206ENST00000413380 SPON1Q9HCB6 807 aa14.42□□□□□ -0.1
HDAC9-206ENST00000413380 LTBP1Q14766 1721 aa14.41□□□□□ -0.1
HDAC9-206ENST00000413380 SRGNP10124 158 aa14.41□□□□□ -0.1
HDAC9-206ENST00000413380 HSP90AB4PQ58FF6 505 aa14.41□□□□□ -0.1
HDAC9-206ENST00000413380 CDC5LQ99459 802 aaKnown RBP14.41□□□□□ -0.1
HDAC9-206ENST00000413380 ARAP2Q8WZ64 1704 aa14.41□□□□□ -0.1
HDAC9-206ENST00000413380 NPR1P16066 1061 aa14.4□□□□□ -0.1
HDAC9-206ENST00000413380 B4GALNT3Q6L9W6 998 aa14.4□□□□□ -0.1
HDAC9-206ENST00000413380 SEC31BQ9NQW1 1179 aa14.4□□□□□ -0.1
HDAC9-206ENST00000413380 CHMP3Q9Y3E7 222 aa14.4□□□□□ -0.1
HDAC9-206ENST00000413380 CD2APQ9Y5K6 639 aa14.4□□□□□ -0.1
HDAC9-206ENST00000413380 SLX4Q8IY92 1834 aa14.4□□□□□ -0.1
HDAC9-206ENST00000413380 EYA2O00167 538 aa14.39□□□□□ -0.11
HDAC9-206ENST00000413380 RAB11FIP3O75154 756 aa14.39□□□□□ -0.11
HDAC9-206ENST00000413380 TGFB2P61812 414 aa14.39□□□□□ -0.11
HDAC9-206ENST00000413380 GRAPQ13588 217 aa14.39□□□□□ -0.11
HDAC9-206ENST00000413380 STYK1Q6J9G0 422 aa14.39□□□□□ -0.11
HDAC9-206ENST00000413380 DDX46Q7L014 1031 aaKnown RBP14.39□□□□□ -0.11
HDAC9-206ENST00000413380 ATG9AQ7Z3C6 839 aa14.39□□□□□ -0.11
HDAC9-206ENST00000413380 GRAPLQ8TC17 118 aaPredicted RBP14.39□□□□□ -0.11
HDAC9-206ENST00000413380 MASTLQ96GX5 879 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms