RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 NLRP13Q86W25 1043 aa7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 SREK1Q8WXA9 508 aaKnown RBP7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 OSBPL7Q9BZF2 842 aa7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 ABI2Q9NYB9 513 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P31-201ENST00000413333 MAN1A2O60476 641 aa7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 SASH3O75995 380 aa7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 CTC1Q2NKJ3 1217 aa7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 PKDCCQ504Y2 493 aa7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 NLRP8Q86W28 1048 aa7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 CHRDQ9H2X0 955 aa7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 CCSER2Q9H7U1 834 aa7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 KCNH4Q9UQ05 1017 aa7.47□□□□□ -1.21
HMGB3P31-201ENST00000413333 GIPC1O14908 333 aa7.46□□□□□ -1.22
HMGB3P31-201ENST00000413333 CES1P23141 567 aa7.46□□□□□ -1.22
HMGB3P31-201ENST00000413333 SFSWAPQ12872 951 aaKnown RBP7.46□□□□□ -1.22
HMGB3P31-201ENST00000413333 NXPE4Q6UWF7 544 aa7.46□□□□□ -1.22
HMGB3P31-201ENST00000413333 CAPN10Q9HC96 672 aa7.46□□□□□ -1.22
HMGB3P31-201ENST00000413333 DCDC2BA2VCK2 349 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 SOBPA7XYQ1 873 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 KHNYNO15037 678 aaKnown RBP7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 ATXN7O15265 892 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 DGAT1O75907 488 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 EGFRP00533 1210 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 USP17L7P0C7H9 530 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 SAMD5Q5TGI4 173 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 GALNT12Q8IXK2 581 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 PMEPA1Q969W9 287 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 BCO2Q9BYV7 579 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 TGIF2Q9GZN2 237 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 KANSL3Q9P2N6 904 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 FAM8A1Q9UBU6 413 aa7.45□□□□□ -1.22
HMGB3P31-201ENST00000413333 CYP2E1P05181 493 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P31-201ENST00000413333 TARSP26639 723 aaKnown RBP7.44□□□□□ -1.22
HMGB3P31-201ENST00000413333 MEI1Q5TIA1 1274 aa7.44□□□□□ -1.22
HMGB3P31-201ENST00000413333 ACBD3Q9H3P7 528 aa7.44□□□□□ -1.22
HMGB3P31-201ENST00000413333 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P31-201ENST00000413333 SENP3-EIF4A1A0A087X0R7 540 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 GFRA3O60609 400 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 RARAP10276 462 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 CCINQ13939 588 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 SF3A1Q15459 793 aaKnown RBP7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 TAF1CQ15572 869 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 ZNF394Q53GI3 561 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 FIGNL1Q6PIW4 674 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 GGT7Q9UJ14 662 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 PCDHGB7Q9Y5F8 929 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 USP31Q70CQ4 1352 aa7.43□□□□□ -1.22
HMGB3P31-201ENST00000413333 PHF20L1A8MW92 1017 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 RGS20O76081 388 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 TNNI2P48788 182 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 GRM2Q14416 872 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 HS2ST1Q7LGA3 356 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 USP48Q86UV5 1035 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 PNMA5Q96PV4 448 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 GSX2Q9BZM3 304 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 NUCKS1Q9H1E3 243 aaKnown RBP7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 EHD4Q9H223 541 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 SUV39H2Q9H5I1 410 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 C11orf16Q9NQ32 467 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 LATS2Q9NRM7 1088 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
HMGB3P31-201ENST00000413333 MMP20O60882 483 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 THBS1P07996 1170 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 FAM157BP0CG42 384 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 KCNQ4P56696 695 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 PTSQ03393 145 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 LBRQ14739 615 aaKnown RBP7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 SRCIN1Q9C0H9 1055 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 ATP13A2Q9NQ11 1180 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 PPP4R2Q9NY27 417 aa7.41□□□□□ -1.22
HMGB3P31-201ENST00000413333 A0A1W2PP55 124 aa7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 ST8SIA5O15466 376 aa7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 MAPTP10636 758 aaKnown RBP7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 EDN3P14138 238 aa7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 GRIN2CQ14957 1233 aa7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 ZNF654Q8IZM8 581 aa7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 TANGO6Q9C0B7 1094 aa7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 STRN4Q9NRL3 753 aa7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 TTF2Q9UNY4 1162 aaKnown RBP7.4□□□□□ -1.22
HMGB3P31-201ENST00000413333 SLC35F4A4IF30 521 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 H7C1W4 665 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 NRG2O14511 850 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 EFSO43281 561 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 NFKB1P19838 968 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 RACK1P63244 317 aaKnown RBP7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 TNP2Q05952 138 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 DBN1Q16643 649 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 KIAA0319Q5VV43 1072 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 RAB44Q7Z6P3 723 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 NCAPG2Q86XI2 1143 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 OR13H1Q8NG92 308 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 UBXN4Q92575 508 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 BHMTQ93088 406 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 MARK1Q9P0L2 795 aa7.39□□□□□ -1.23
HMGB3P31-201ENST00000413333 ZFATQ9P243 1243 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms