RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 GREM2Q9H772 168 aa32.37■■■□□ 2.77
RHBDD3-203ENST00000413137 SSH3Q8TE77 659 aa32.36■■■□□ 2.77
RHBDD3-203ENST00000413137 TNRC6CQ9HCJ0 1690 aaKnown RBP32.35■■■□□ 2.77
RHBDD3-203ENST00000413137 KLHDC4Q8TBB5 520 aa32.35■■■□□ 2.77
RHBDD3-203ENST00000413137 LAMB2P55268 1798 aa32.34■■■□□ 2.77
RHBDD3-203ENST00000413137 RFX5P48382 616 aaPredicted RBP32.34■■■□□ 2.77
RHBDD3-203ENST00000413137 NLRP3Q96P20 1036 aa32.34■■■□□ 2.77
RHBDD3-203ENST00000413137 HSP90B1P14625 803 aaKnown RBP32.33■■■□□ 2.77
RHBDD3-203ENST00000413137 SF3B3Q15393 1217 aaKnown RBP32.33■■■□□ 2.77
RHBDD3-203ENST00000413137 RWDD1Q9H446 243 aaPredicted RBP32.33■■■□□ 2.77
RHBDD3-203ENST00000413137 PA2G4Q9UQ80 394 aaKnown RBP32.33■■■□□ 2.77
RHBDD3-203ENST00000413137 SGIP1Q9BQI5 828 aa32.32■■■□□ 2.76
RHBDD3-203ENST00000413137 SEC31BQ9NQW1 1179 aa32.32■■■□□ 2.76
RHBDD3-203ENST00000413137 ZNF594Q96JF6 807 aaPredicted RBP32.31■■■□□ 2.76
RHBDD3-203ENST00000413137 HMMRO75330 724 aa32.3■■■□□ 2.76
RHBDD3-203ENST00000413137 ITGA6P23229 1130 aa32.3■■■□□ 2.76
RHBDD3-203ENST00000413137 PTGER2P43116 358 aa32.3■■■□□ 2.76
RHBDD3-203ENST00000413137 CCDC152Q4G0S7 254 aa32.3■■■□□ 2.76
RHBDD3-203ENST00000413137 BRIP1Q9BX63 1249 aa32.3■■■□□ 2.76
RHBDD3-203ENST00000413137 RIC1Q4ADV7 1423 aa32.3■■■□□ 2.76
RHBDD3-203ENST00000413137 KDM2BQ8NHM5 1336 aa32.3■■■□□ 2.76
RHBDD3-203ENST00000413137 PTPN12Q05209 780 aaKnown RBP32.29■■■□□ 2.76
RHBDD3-203ENST00000413137 MYH3P11055 1940 aa32.29■■■□□ 2.76
RHBDD3-203ENST00000413137 KLRG2A4D1S0 409 aaPredicted RBP32.28■■■□□ 2.76
RHBDD3-203ENST00000413137 IFIT5Q13325 482 aaKnown RBP32.28■■■□□ 2.76
RHBDD3-203ENST00000413137 CCDC57Q2TAC2 916 aa32.28■■■□□ 2.76
RHBDD3-203ENST00000413137 ANKRD31Q8N7Z5 1873 aa32.27■■■□□ 2.76
RHBDD3-203ENST00000413137 COL4A1P02462 1669 aa32.27■■■□□ 2.76
RHBDD3-203ENST00000413137 POLD1P28340 1107 aa32.27■■■□□ 2.76
RHBDD3-203ENST00000413137 CRY2Q49AN0 593 aa32.27■■■□□ 2.76
RHBDD3-203ENST00000413137 DCTPP1Q9H773 170 aa32.27■■■□□ 2.76
RHBDD3-203ENST00000413137 EXOC6BQ9Y2D4 811 aa32.27■■■□□ 2.76
RHBDD3-203ENST00000413137 RTL9Q8NET4 1388 aa32.25■■■□□ 2.75
RHBDD3-203ENST00000413137 ANKRD18BA2A2Z9 1011 aa32.24■■■□□ 2.75
RHBDD3-203ENST00000413137 SURF6O75683 361 aaKnown RBP32.24■■■□□ 2.75
RHBDD3-203ENST00000413137 SIL1Q9H173 461 aa32.24■■■□□ 2.75
RHBDD3-203ENST00000413137 COPRSQ9NQ92 184 aa32.24■■■□□ 2.75
RHBDD3-203ENST00000413137 PUS3Q9BZE2 481 aaKnown RBP32.23■■■□□ 2.75
RHBDD3-203ENST00000413137 NOP58Q9Y2X3 529 aaKnown RBP32.23■■■□□ 2.75
RHBDD3-203ENST00000413137 C10orf71Q711Q0 1435 aa32.22■■■□□ 2.75
RHBDD3-203ENST00000413137 SMC5Q8IY18 1101 aa32.22■■■□□ 2.75
RHBDD3-203ENST00000413137 CELF1Q92879 486 aaKnown RBP32.22■■■□□ 2.75
RHBDD3-203ENST00000413137 PDE6BP35913 854 aa32.21■■■□□ 2.75
RHBDD3-203ENST00000413137 APBB1O00213 710 aa32.2■■■□□ 2.75
RHBDD3-203ENST00000413137 LRRC24Q50LG9 513 aa32.2■■■□□ 2.75
RHBDD3-203ENST00000413137 CENPQQ7L2Z9 268 aaPredicted RBP32.2■■■□□ 2.75
RHBDD3-203ENST00000413137 SRGNP10124 158 aa32.19■■■□□ 2.74
RHBDD3-203ENST00000413137 TAF7LQ5H9L4 462 aa32.19■■■□□ 2.74
RHBDD3-203ENST00000413137 RPGRQ92834 1020 aaKnown RBP32.19■■■□□ 2.74
RHBDD3-203ENST00000413137 SPON1Q9HCB6 807 aa32.19■■■□□ 2.74
RHBDD3-203ENST00000413137 TAF1P21675 1872 aa32.19■■■□□ 2.74
RHBDD3-203ENST00000413137 CHRNA5P30532 468 aa32.19■■■□□ 2.74
RHBDD3-203ENST00000413137 DDX46Q7L014 1031 aaKnown RBP32.19■■■□□ 2.74
RHBDD3-203ENST00000413137 ATG9AQ7Z3C6 839 aa32.18■■■□□ 2.74
RHBDD3-203ENST00000413137 C2CD5Q86YS7 1000 aa32.18■■■□□ 2.74
RHBDD3-203ENST00000413137 GCC1Q96CN9 775 aa32.18■■■□□ 2.74
RHBDD3-203ENST00000413137 HOXA10P31260 410 aaPredicted RBP32.17■■■□□ 2.74
RHBDD3-203ENST00000413137 SLC51AQ86UW1 340 aa32.17■■■□□ 2.74
RHBDD3-203ENST00000413137 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.17■■■□□ 2.74
RHBDD3-203ENST00000413137 EYA2O00167 538 aa32.15■■■□□ 2.74
RHBDD3-203ENST00000413137 G3BP1Q13283 466 aaKnown RBP eCLIP32.15■■■□□ 2.74
RHBDD3-203ENST00000413137 LDHAL6AQ6ZMR3 332 aa32.15■■■□□ 2.74
RHBDD3-203ENST00000413137 RBM17Q96I25 401 aaKnown RBP32.15■■■□□ 2.74
RHBDD3-203ENST00000413137 CDC5LQ99459 802 aaKnown RBP32.15■■■□□ 2.74
RHBDD3-203ENST00000413137 COL11A2P13942 1736 aaPredicted RBP32.15■■■□□ 2.74
RHBDD3-203ENST00000413137 SASH1O94885 1247 aa32.15■■■□□ 2.74
RHBDD3-203ENST00000413137 SMARCA5O60264 1052 aaPredicted RBP32.14■■■□□ 2.74
RHBDD3-203ENST00000413137 NPR1P16066 1061 aa32.14■■■□□ 2.74
RHBDD3-203ENST00000413137 RPS8P62241 208 aaKnown RBP32.14■■■□□ 2.74
RHBDD3-203ENST00000413137 OS9Q13438 667 aaPredicted RBP32.14■■■□□ 2.74
RHBDD3-203ENST00000413137 ANKRD18AQ8IVF6 992 aa32.14■■■□□ 2.74
RHBDD3-203ENST00000413137 H0YIN7 160 aa32.13■■■□□ 2.73
RHBDD3-203ENST00000413137 GRAPQ13588 217 aa32.13■■■□□ 2.73
RHBDD3-203ENST00000413137 SKAP1Q86WV1 359 aa32.13■■■□□ 2.73
RHBDD3-203ENST00000413137 GRAPLQ8TC17 118 aaPredicted RBP32.13■■■□□ 2.73
RHBDD3-203ENST00000413137 RIPOR2Q9Y4F9 1068 aa32.13■■■□□ 2.73
RHBDD3-203ENST00000413137 IGHMBP2P38935 993 aaKnown RBP32.12■■■□□ 2.73
RHBDD3-203ENST00000413137 ANKRD45Q5TZF3 282 aa32.12■■■□□ 2.73
RHBDD3-203ENST00000413137 MASTLQ96GX5 879 aa32.12■■■□□ 2.73
RHBDD3-203ENST00000413137 PPP1R1BQ9UD71 204 aaPredicted RBP32.12■■■□□ 2.73
RHBDD3-203ENST00000413137 LRP5O75197 1615 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 A0A0G2JLW4 131 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 CIAO1O76071 339 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 CRAMP1Q96RY5 1269 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 MPHOSPH8Q99549 860 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 BCL11AQ9H165 835 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 CNNM1Q9NRU3 951 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 PDZRN3Q9UPQ7 1066 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 RHPN1Q8TCX5 695 aa32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 ZNF622Q969S3 477 aaKnown RBP eCLIP32.11■■■□□ 2.73
RHBDD3-203ENST00000413137 SRCAPQ6ZRS2 3230 aa32.1■■■□□ 2.73
RHBDD3-203ENST00000413137 RAB11FIP3O75154 756 aa32.1■■■□□ 2.73
RHBDD3-203ENST00000413137 DPEP1P16444 411 aa32.1■■■□□ 2.73
RHBDD3-203ENST00000413137 NUCB1Q02818 461 aa32.1■■■□□ 2.73
RHBDD3-203ENST00000413137 HSP90AB4PQ58FF6 505 aa32.1■■■□□ 2.73
RHBDD3-203ENST00000413137 KLHL34Q8N239 644 aa32.1■■■□□ 2.73
RHBDD3-203ENST00000413137 KIF13BQ9NQT8 1826 aa32.09■■■□□ 2.73
RHBDD3-203ENST00000413137 TFCP2Q12800 502 aa32.09■■■□□ 2.73
RHBDD3-203ENST00000413137 IL1RAPL2Q9NP60 686 aa32.09■■■□□ 2.73
RHBDD3-203ENST00000413137 BSDC1Q9NW68 430 aaPredicted RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms