RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 BLOC1S2Q6QNY1 142 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 COL5A2P05997 1499 aaPredicted RBP13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 TAF5LO75529 589 aa13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 HAUS7Q99871 368 aa13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 CHMP3Q9Y3E7 222 aa13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 JCADQ9P266 1359 aa13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 ZNF589Q86UQ0 364 aaPredicted RBP13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 EDC3Q96F86 508 aaKnown RBP13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 DBNDD2Q9BQY9 259 aa13.72□□□□□ -0.21
TRAFD1-202ENST00000412615 GADD45BO75293 160 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-202ENST00000412615 A1BGP04217 495 aa13.71□□□□□ -0.21
TRAFD1-202ENST00000412615 RPS6KB1P23443 525 aa13.71□□□□□ -0.21
TRAFD1-202ENST00000412615 KRT32Q14532 448 aa13.71□□□□□ -0.21
TRAFD1-202ENST00000412615 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.21
TRAFD1-202ENST00000412615 CCDC191Q8NCU4 936 aa13.71□□□□□ -0.21
TRAFD1-202ENST00000412615 DDX54Q8TDD1 881 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-202ENST00000412615 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.22
TRAFD1-202ENST00000412615 GPR108Q9NPR9 543 aa13.71□□□□□ -0.22
TRAFD1-202ENST00000412615 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.22
TRAFD1-202ENST00000412615 CNPY2Q9Y2B0 182 aa13.71□□□□□ -0.22
TRAFD1-202ENST00000412615 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
TRAFD1-202ENST00000412615 EVA1CP58658 441 aa13.7□□□□□ -0.22
TRAFD1-202ENST00000412615 DNAJC2Q99543 621 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-202ENST00000412615 MTMR6Q9Y217 621 aa13.7□□□□□ -0.22
TRAFD1-202ENST00000412615 UBE2HP62256 183 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 MCMDC2Q4G0Z9 681 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 TICAM2Q86XR7 235 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 NECAB1Q8N987 351 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 ATG3Q9NT62 314 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 PDCP20941 246 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 HS1BP3Q53T59 392 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 KBTBD3Q8NAB2 608 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 PDLIM2Q96JY6 352 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 KCPQ6ZWJ8 1503 aa13.69□□□□□ -0.22
TRAFD1-202ENST00000412615 NEUROD6Q96NK8 337 aa13.68□□□□□ -0.22
TRAFD1-202ENST00000412615 UBR2Q8IWV8 1755 aa13.68□□□□□ -0.22
TRAFD1-202ENST00000412615 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
TRAFD1-202ENST00000412615 LARP1BQ659C4 914 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-202ENST00000412615 TNS2Q63HR2 1409 aa13.68□□□□□ -0.22
TRAFD1-202ENST00000412615 EYA2O00167 538 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 DDX46Q7L014 1031 aaKnown RBP13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 VPS37CA5D8V6 355 aaPredicted RBP13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 CIAO1O76071 339 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 CCDC183Q5T5S1 534 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 ZSCAN30Q86W11 494 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 ZNF609O15014 1411 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 FIBPO43427 364 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 TOB2Q14106 344 aaPredicted RBP13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 TAF6LQ9Y6J9 622 aa13.67□□□□□ -0.22
TRAFD1-202ENST00000412615 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 TIMM10P62072 90 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 TCEANC2Q96MN5 208 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 ISCA1Q9BUE6 129 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 HELLSQ9NRZ9 838 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 PAPPAQ13219 1627 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 PALLDQ8WX93 1383 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 DNM1Q05193 864 aaKnown RBP13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 SEC62Q99442 399 aaKnown RBP13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 PAG1Q9NWQ8 432 aa13.66□□□□□ -0.22
TRAFD1-202ENST00000412615 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 GOLIM4O00461 696 aa13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 CCDC129Q6ZRS4 1044 aa13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 TRIM28Q13263 835 aaKnown RBP13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 LRRC24Q50LG9 513 aa13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
TRAFD1-202ENST00000412615 MSNP26038 577 aaKnown RBP13.64□□□□□ -0.23
TRAFD1-202ENST00000412615 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
TRAFD1-202ENST00000412615 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
TRAFD1-202ENST00000412615 CYP21A2P08686 494 aa13.64□□□□□ -0.23
TRAFD1-202ENST00000412615 HMGB1P09429 215 aaKnown RBP13.64□□□□□ -0.23
TRAFD1-202ENST00000412615 ZNF594Q96JF6 807 aaPredicted RBP13.64□□□□□ -0.23
TRAFD1-202ENST00000412615 CEP126Q9P2H0 1117 aa13.64□□□□□ -0.23
TRAFD1-202ENST00000412615 A0A1B0GUL7 405 aa13.63□□□□□ -0.23
TRAFD1-202ENST00000412615 IFIT1P09914 478 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-202ENST00000412615 KRT85P78386 507 aa13.63□□□□□ -0.23
TRAFD1-202ENST00000412615 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
TRAFD1-202ENST00000412615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAFD1-202ENST00000412615 DSCC1Q9BVC3 393 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms