RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 JARID2Q92833 1246 aaPredicted RBP23.23■■□□□ 1.31
CDC42-204ENST00000411827 C1orf115Q9H7X2 142 aa23.23■■□□□ 1.31
CDC42-204ENST00000411827 FBXO3Q9UK99 471 aa23.23■■□□□ 1.31
CDC42-204ENST00000411827 PCDHB15Q9Y5E8 787 aa23.23■■□□□ 1.31
CDC42-204ENST00000411827 IFIT5Q13325 482 aaKnown RBP23.22■■□□□ 1.31
CDC42-204ENST00000411827 CRY2Q49AN0 593 aa23.22■■□□□ 1.31
CDC42-204ENST00000411827 HSP90AB4PQ58FF6 505 aa23.22■■□□□ 1.31
CDC42-204ENST00000411827 POLA2Q14181 598 aa23.21■■□□□ 1.31
CDC42-204ENST00000411827 EPHA10Q5JZY3 1008 aa23.21■■□□□ 1.31
CDC42-204ENST00000411827 ATF5Q9Y2D1 282 aaPredicted RBP23.21■■□□□ 1.31
CDC42-204ENST00000411827 ABCC12Q96J65 1359 aa23.21■■□□□ 1.31
CDC42-204ENST00000411827 ANKRD18BA2A2Z9 1011 aa23.2■■□□□ 1.3
CDC42-204ENST00000411827 CCDC136Q96JN2 1154 aa23.2■■□□□ 1.3
CDC42-204ENST00000411827 CDC5LQ99459 802 aaKnown RBP23.2■■□□□ 1.3
CDC42-204ENST00000411827 SGIP1Q9BQI5 828 aa23.2■■□□□ 1.3
CDC42-204ENST00000411827 MYH3P11055 1940 aa23.18■■□□□ 1.3
CDC42-204ENST00000411827 HOXA10P31260 410 aaPredicted RBP23.18■■□□□ 1.3
CDC42-204ENST00000411827 DDX46Q7L014 1031 aaKnown RBP23.18■■□□□ 1.3
CDC42-204ENST00000411827 RPGRQ92834 1020 aaKnown RBP23.18■■□□□ 1.3
CDC42-204ENST00000411827 GCC1Q96CN9 775 aa23.18■■□□□ 1.3
CDC42-204ENST00000411827 COPRSQ9NQ92 184 aa23.18■■□□□ 1.3
CDC42-204ENST00000411827 CHMP3Q9Y3E7 222 aa23.18■■□□□ 1.3
CDC42-204ENST00000411827 CD2APQ9Y5K6 639 aa23.18■■□□□ 1.3
CDC42-204ENST00000411827 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
CDC42-204ENST00000411827 C10orf71Q711Q0 1435 aa23.17■■□□□ 1.3
CDC42-204ENST00000411827 H0YIN7 160 aa23.17■■□□□ 1.3
CDC42-204ENST00000411827 ITGA6P23229 1130 aa23.17■■□□□ 1.3
CDC42-204ENST00000411827 PTGER2P43116 358 aa23.17■■□□□ 1.3
CDC42-204ENST00000411827 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
CDC42-204ENST00000411827 RBM17Q96I25 401 aaKnown RBP23.17■■□□□ 1.3
CDC42-204ENST00000411827 CRAMP1Q96RY5 1269 aa23.17■■□□□ 1.3
CDC42-204ENST00000411827 PNMA6EA0A0J9YXQ4 647 aa23.16■■□□□ 1.3
CDC42-204ENST00000411827 NPR1P16066 1061 aa23.16■■□□□ 1.3
CDC42-204ENST00000411827 ALDH1B1P30837 517 aa23.16■■□□□ 1.3
CDC42-204ENST00000411827 TGFB2P61812 414 aa23.16■■□□□ 1.3
CDC42-204ENST00000411827 TAF7LQ5H9L4 462 aa23.16■■□□□ 1.3
CDC42-204ENST00000411827 TMC4Q7Z404 712 aa23.16■■□□□ 1.3
CDC42-204ENST00000411827 GREM2Q9H772 168 aa23.16■■□□□ 1.3
CDC42-204ENST00000411827 NOP58Q9Y2X3 529 aaKnown RBP23.16■■□□□ 1.3
CDC42-204ENST00000411827 GTF3C3Q9Y5Q9 886 aa23.16■■□□□ 1.3
CDC42-204ENST00000411827 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
CDC42-204ENST00000411827 ERC1Q8IUD2 1116 aa23.15■■□□□ 1.3
CDC42-204ENST00000411827 MASTLQ96GX5 879 aa23.15■■□□□ 1.3
CDC42-204ENST00000411827 DCTPP1Q9H773 170 aa23.15■■□□□ 1.3
CDC42-204ENST00000411827 RAB11FIP3O75154 756 aa23.14■■□□□ 1.29
CDC42-204ENST00000411827 CIAO1O76071 339 aa23.14■■□□□ 1.29
CDC42-204ENST00000411827 SRGNP10124 158 aa23.14■■□□□ 1.29
CDC42-204ENST00000411827 STYK1Q6J9G0 422 aa23.14■■□□□ 1.29
CDC42-204ENST00000411827 CENPQQ7L2Z9 268 aaPredicted RBP23.14■■□□□ 1.29
CDC42-204ENST00000411827 BBOX1O75936 387 aa23.13■■□□□ 1.29
CDC42-204ENST00000411827 IGHMBP2P38935 993 aaKnown RBP23.13■■□□□ 1.29
CDC42-204ENST00000411827 RFX5P48382 616 aaPredicted RBP23.13■■□□□ 1.29
CDC42-204ENST00000411827 ANKRD18AQ8IVF6 992 aa23.13■■□□□ 1.29
CDC42-204ENST00000411827 SURF6O75683 361 aaKnown RBP23.12■■□□□ 1.29
CDC42-204ENST00000411827 RPS8P62241 208 aaKnown RBP23.12■■□□□ 1.29
CDC42-204ENST00000411827 PTPN12Q05209 780 aaKnown RBP23.12■■□□□ 1.29
CDC42-204ENST00000411827 G3BP1Q13283 466 aaKnown RBP eCLIP23.12■■□□□ 1.29
CDC42-204ENST00000411827 CCDC24Q8N4L8 307 aa23.12■■□□□ 1.29
CDC42-204ENST00000411827 MPHOSPH8Q99549 860 aa23.12■■□□□ 1.29
CDC42-204ENST00000411827 IL15P40933 162 aaPredicted RBP23.11■■□□□ 1.29
CDC42-204ENST00000411827 GRAPQ13588 217 aa23.11■■□□□ 1.29
CDC42-204ENST00000411827 C3orf67Q6ZVT6 689 aa23.11■■□□□ 1.29
CDC42-204ENST00000411827 C2CD5Q86YS7 1000 aa23.11■■□□□ 1.29
CDC42-204ENST00000411827 SMC5Q8IY18 1101 aa23.11■■□□□ 1.29
CDC42-204ENST00000411827 GRAPLQ8TC17 118 aaPredicted RBP23.11■■□□□ 1.29
CDC42-204ENST00000411827 CNKSR1Q969H4 720 aa23.11■■□□□ 1.29
CDC42-204ENST00000411827 LDHAL6AQ6ZMR3 332 aa23.1■■□□□ 1.29
CDC42-204ENST00000411827 BSDC1Q9NW68 430 aaPredicted RBP23.1■■□□□ 1.29
CDC42-204ENST00000411827 ZBTB47Q9UFB7 747 aaPredicted RBP23.1■■□□□ 1.29
CDC42-204ENST00000411827 EYA2O00167 538 aa23.09■■□□□ 1.29
CDC42-204ENST00000411827 KIF13BQ9NQT8 1826 aa23.08■■□□□ 1.29
CDC42-204ENST00000411827 IGHDP01880 384 aa23.08■■□□□ 1.29
CDC42-204ENST00000411827 OS9Q13438 667 aaPredicted RBP23.08■■□□□ 1.29
CDC42-204ENST00000411827 KIF1BPQ96EK5 621 aa23.08■■□□□ 1.29
CDC42-204ENST00000411827 CCDC85AQ96PX6 553 aaPredicted RBP23.08■■□□□ 1.29
CDC42-204ENST00000411827 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
CDC42-204ENST00000411827 MROH5Q6ZUA9 1318 aa23.08■■□□□ 1.28
CDC42-204ENST00000411827 ANKRD31Q8N7Z5 1873 aa23.07■■□□□ 1.28
CDC42-204ENST00000411827 TNRC6CQ9HCJ0 1690 aaKnown RBP23.07■■□□□ 1.28
CDC42-204ENST00000411827 GRIPAP1Q4V328 841 aa23.07■■□□□ 1.28
CDC42-204ENST00000411827 SEC31BQ9NQW1 1179 aa23.07■■□□□ 1.28
CDC42-204ENST00000411827 CNNM1Q9NRU3 951 aa23.07■■□□□ 1.28
CDC42-204ENST00000411827 KDM2BQ8NHM5 1336 aa23.07■■□□□ 1.28
CDC42-204ENST00000411827 CC2D2BQ6DHV5 1058 aa23.05■■□□□ 1.28
CDC42-204ENST00000411827 LRRCC1Q9C099 1032 aa23.05■■□□□ 1.28
CDC42-204ENST00000411827 ANKRD2Q9GZV1 360 aa23.05■■□□□ 1.28
CDC42-204ENST00000411827 RIPOR2Q9Y4F9 1068 aa23.05■■□□□ 1.28
CDC42-204ENST00000411827 B4GALNT3Q6L9W6 998 aa23.04■■□□□ 1.28
CDC42-204ENST00000411827 ZNF622Q969S3 477 aaKnown RBP eCLIP23.04■■□□□ 1.28
CDC42-204ENST00000411827 GPR108Q9NPR9 543 aa23.04■■□□□ 1.28
CDC42-204ENST00000411827 CEP126Q9P2H0 1117 aa23.04■■□□□ 1.28
CDC42-204ENST00000411827 PPP1R1BQ9UD71 204 aaPredicted RBP23.04■■□□□ 1.28
CDC42-204ENST00000411827 PA2G4Q9UQ80 394 aaKnown RBP23.04■■□□□ 1.28
CDC42-204ENST00000411827 CELF1Q92879 486 aaKnown RBP23.03■■□□□ 1.28
CDC42-204ENST00000411827 ZNF594Q96JF6 807 aaPredicted RBP23.03■■□□□ 1.28
CDC42-204ENST00000411827 PIM2Q9P1W9 311 aa23.03■■□□□ 1.28
CDC42-204ENST00000411827 EXOC6BQ9Y2D4 811 aa23.03■■□□□ 1.28
CDC42-204ENST00000411827 AKAP2Q9Y2D5 859 aa23.03■■□□□ 1.28
CDC42-204ENST00000411827 SOGA3Q5TF21 947 aa23.02■■□□□ 1.28
CDC42-204ENST00000411827 ATG9AQ7Z3C6 839 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms