RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 RPAP1Q9BWH6 1393 aaPredicted RBP24.26■■□□□ 1.47
SUMO3-204ENST00000411651 A0A0D9SFI3 127 aa24.25■■□□□ 1.47
SUMO3-204ENST00000411651 SLC4A9Q96Q91 983 aa24.25■■□□□ 1.47
SUMO3-204ENST00000411651 LIMCH1Q9UPQ0 1083 aa24.25■■□□□ 1.47
SUMO3-204ENST00000411651 RBM8AQ9Y5S9 174 aaKnown RBP24.25■■□□□ 1.47
SUMO3-204ENST00000411651 SLIT2O94813 1529 aa24.25■■□□□ 1.47
SUMO3-204ENST00000411651 BRD1O95696 1058 aa24.25■■□□□ 1.47
SUMO3-204ENST00000411651 CCDC57Q2TAC2 916 aa24.25■■□□□ 1.47
SUMO3-204ENST00000411651 BARGINQ6ZT62 677 aa24.25■■□□□ 1.47
SUMO3-204ENST00000411651 PSMA5P28066 241 aa24.24■■□□□ 1.47
SUMO3-204ENST00000411651 KLHL40Q2TBA0 621 aa24.24■■□□□ 1.47
SUMO3-204ENST00000411651 USPL1Q5W0Q7 1092 aa24.24■■□□□ 1.47
SUMO3-204ENST00000411651 CREB3L3Q68CJ9 461 aa24.24■■□□□ 1.47
SUMO3-204ENST00000411651 ZDHHC9Q9Y397 364 aa24.24■■□□□ 1.47
SUMO3-204ENST00000411651 RREB1Q92766 1687 aa24.24■■□□□ 1.47
SUMO3-204ENST00000411651 DDB1Q16531 1140 aa24.23■■□□□ 1.47
SUMO3-204ENST00000411651 PRPF40BQ6NWY9 871 aaKnown RBP24.23■■□□□ 1.47
SUMO3-204ENST00000411651 KBTBD3Q8NAB2 608 aa24.23■■□□□ 1.47
SUMO3-204ENST00000411651 ZSCAN31Q96LW9 406 aaPredicted RBP24.23■■□□□ 1.47
SUMO3-204ENST00000411651 ALDH8A1Q9H2A2 487 aaPredicted RBP24.23■■□□□ 1.47
SUMO3-204ENST00000411651 CYP46A1Q9Y6A2 500 aa24.23■■□□□ 1.47
SUMO3-204ENST00000411651 SPATA31A5Q5VU36 1347 aa24.23■■□□□ 1.47
SUMO3-204ENST00000411651 SPATA31A7Q8IWB4 1347 aa24.23■■□□□ 1.47
SUMO3-204ENST00000411651 AK2P54819 239 aa24.23■■□□□ 1.47
SUMO3-204ENST00000411651 SH2B1Q9NRF2 756 aaPredicted RBP24.23■■□□□ 1.47
SUMO3-204ENST00000411651 AKAP2Q9Y2D5 859 aa24.23■■□□□ 1.47
SUMO3-204ENST00000411651 SH3TC1Q8TE82 1336 aa24.23■■□□□ 1.47
SUMO3-204ENST00000411651 ABCC12Q96J65 1359 aa24.22■■□□□ 1.47
SUMO3-204ENST00000411651 CASTP20810 708 aaKnown RBP24.22■■□□□ 1.47
SUMO3-204ENST00000411651 PKP1Q13835 747 aa24.22■■□□□ 1.47
SUMO3-204ENST00000411651 NLRP10Q86W26 655 aa24.22■■□□□ 1.47
SUMO3-204ENST00000411651 RUFY3Q7L099 469 aa24.22■■□□□ 1.47
SUMO3-204ENST00000411651 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.22■■□□□ 1.47
SUMO3-204ENST00000411651 JAKMIP1Q96N16 626 aaKnown RBP24.21■■□□□ 1.47
SUMO3-204ENST00000411651 CEP126Q9P2H0 1117 aa24.21■■□□□ 1.47
SUMO3-204ENST00000411651 GOLGA6L3A6NEY3 463 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 SLC27A2O14975 620 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 TAF5LO75529 589 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 PRIM1P49642 420 aaKnown RBP24.2■■□□□ 1.46
SUMO3-204ENST00000411651 AK7Q96M32 723 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 ZBTB1Q9Y2K1 713 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 KCNJ4P48050 445 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 KRT32Q14532 448 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 LRRC24Q50LG9 513 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 PDRG1Q9NUG6 133 aa24.2■■□□□ 1.46
SUMO3-204ENST00000411651 NUP98P52948 1817 aa24.19■■□□□ 1.46
SUMO3-204ENST00000411651 TOM1O60784 492 aa24.19■■□□□ 1.46
SUMO3-204ENST00000411651 PDIA4P13667 645 aaKnown RBP24.19■■□□□ 1.46
SUMO3-204ENST00000411651 MCMDC2Q4G0Z9 681 aa24.19■■□□□ 1.46
SUMO3-204ENST00000411651 HELLSQ9NRZ9 838 aa24.19■■□□□ 1.46
SUMO3-204ENST00000411651 ZNF330Q9Y3S2 320 aaPredicted RBP24.19■■□□□ 1.46
SUMO3-204ENST00000411651 MYH3P11055 1940 aa24.19■■□□□ 1.46
SUMO3-204ENST00000411651 ZNF831Q5JPB2 1677 aa24.18■■□□□ 1.46
SUMO3-204ENST00000411651 A0A1B0GUL7 405 aa24.18■■□□□ 1.46
SUMO3-204ENST00000411651 IFIT5Q13325 482 aaKnown RBP24.18■■□□□ 1.46
SUMO3-204ENST00000411651 ANKRD1Q15327 319 aa24.18■■□□□ 1.46
SUMO3-204ENST00000411651 WDR33Q9C0J8 1336 aaKnown RBP24.18■■□□□ 1.46
SUMO3-204ENST00000411651 PAG1Q9NWQ8 432 aa24.18■■□□□ 1.46
SUMO3-204ENST00000411651 U3KPZ7 1027 aaPredicted RBP24.18■■□□□ 1.46
SUMO3-204ENST00000411651 HLFQ16534 295 aa24.17■■□□□ 1.46
SUMO3-204ENST00000411651 LRRFIP1Q32MZ4 808 aaKnown RBP24.17■■□□□ 1.46
SUMO3-204ENST00000411651 ADCK5Q3MIX3 580 aa24.17■■□□□ 1.46
SUMO3-204ENST00000411651 ZNF589Q86UQ0 364 aaPredicted RBP24.17■■□□□ 1.46
SUMO3-204ENST00000411651 FAM89AQ96GI7 184 aa24.17■■□□□ 1.46
SUMO3-204ENST00000411651 NEUROD6Q96NK8 337 aa24.17■■□□□ 1.46
SUMO3-204ENST00000411651 DNAJC2Q99543 621 aaKnown RBP24.17■■□□□ 1.46
SUMO3-204ENST00000411651 LMBRD1Q9NUN5 540 aa24.17■■□□□ 1.46
SUMO3-204ENST00000411651 ADAMTS2O95450 1211 aa24.16■■□□□ 1.46
SUMO3-204ENST00000411651 MCTP1Q6DN14 999 aa24.16■■□□□ 1.46
SUMO3-204ENST00000411651 SYTL4Q96C24 671 aaPredicted RBP24.16■■□□□ 1.46
SUMO3-204ENST00000411651 EIF5P55010 431 aaKnown RBP24.16■■□□□ 1.46
SUMO3-204ENST00000411651 ZNF34Q8IZ26 560 aa24.16■■□□□ 1.46
SUMO3-204ENST00000411651 EDC3Q96F86 508 aaKnown RBP24.16■■□□□ 1.46
SUMO3-204ENST00000411651 ZNF594Q96JF6 807 aaPredicted RBP24.16■■□□□ 1.46
SUMO3-204ENST00000411651 CTSWP56202 376 aa24.15■■□□□ 1.46
SUMO3-204ENST00000411651 TIMM10P62072 90 aa24.15■■□□□ 1.46
SUMO3-204ENST00000411651 DZIP3Q86Y13 1208 aaKnown RBP24.15■■□□□ 1.46
SUMO3-204ENST00000411651 LRP5O75197 1615 aa24.14■■□□□ 1.46
SUMO3-204ENST00000411651 NOL8Q76FK4 1167 aaKnown RBP24.14■■□□□ 1.46
SUMO3-204ENST00000411651 TTLL11Q8NHH1 800 aa24.14■■□□□ 1.46
SUMO3-204ENST00000411651 DDX49Q9Y6V7 483 aaKnown RBP24.14■■□□□ 1.46
SUMO3-204ENST00000411651 IFIT1P09914 478 aaKnown RBP24.14■■□□□ 1.45
SUMO3-204ENST00000411651 MRE11P49959 708 aa24.14■■□□□ 1.45
SUMO3-204ENST00000411651 TAF7LQ5H9L4 462 aa24.14■■□□□ 1.45
SUMO3-204ENST00000411651 CCDC158Q5M9N0 1113 aa24.14■■□□□ 1.45
SUMO3-204ENST00000411651 PUS3Q9BZE2 481 aaKnown RBP24.14■■□□□ 1.45
SUMO3-204ENST00000411651 GZF1Q9H116 711 aaPredicted RBP24.14■■□□□ 1.45
SUMO3-204ENST00000411651 PDE8AO60658 829 aa24.13■■□□□ 1.45
SUMO3-204ENST00000411651 BLOC1S2Q6QNY1 142 aa24.13■■□□□ 1.45
SUMO3-204ENST00000411651 DDX46Q7L014 1031 aaKnown RBP24.13■■□□□ 1.45
SUMO3-204ENST00000411651 MARCH10Q8NA82 808 aaPredicted RBP24.13■■□□□ 1.45
SUMO3-204ENST00000411651 SMARCC1Q92922 1105 aaPredicted RBP24.13■■□□□ 1.45
SUMO3-204ENST00000411651 DSCC1Q9BVC3 393 aa24.13■■□□□ 1.45
SUMO3-204ENST00000411651 CCDC87Q9NVE4 849 aa24.13■■□□□ 1.45
SUMO3-204ENST00000411651 RIC1Q4ADV7 1423 aa24.13■■□□□ 1.45
SUMO3-204ENST00000411651 ZMYM1Q5SVZ6 1142 aa24.12■■□□□ 1.45
SUMO3-204ENST00000411651 ZNF512BQ96KM6 892 aaPredicted RBP24.12■■□□□ 1.45
SUMO3-204ENST00000411651 IRS4O14654 1257 aaPredicted RBP24.12■■□□□ 1.45
SUMO3-204ENST00000411651 RPS6KB1P23443 525 aa24.12■■□□□ 1.45
SUMO3-204ENST00000411651 RIPOR2Q9Y4F9 1068 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms