RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-1140P-201ENST00000410517 PCDHGA11Q9Y5H2 935 aa4.89□□□□□ -1.63
RNU6-1140P-201ENST00000410517 ZNF865P0CJ78 1059 aaPredicted RBP4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 JUNBP17275 347 aaPredicted RBP4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 HOXA10P31260 410 aaPredicted RBP4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 CBLL1Q75N03 491 aa4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 BTLAQ7Z6A9 289 aa4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 TNS4Q8IZW8 715 aa4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 SHKBP1Q8TBC3 707 aa4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 TTC9Q92623 222 aa4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 PHACTR1Q9C0D0 580 aa4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 SMG9Q9H0W8 520 aaKnown RBP4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 ZNF358Q9NW07 568 aa4.88□□□□□ -1.63
RNU6-1140P-201ENST00000410517 PSME1Q06323 249 aa4.87□□□□□ -1.63
RNU6-1140P-201ENST00000410517 MTMR14Q8NCE2 650 aa4.87□□□□□ -1.63
RNU6-1140P-201ENST00000410517 UTP4Q969X6 686 aaKnown RBP4.87□□□□□ -1.63
RNU6-1140P-201ENST00000410517 WDR64B1ANS9 1081 aa4.86□□□□□ -1.63
RNU6-1140P-201ENST00000410517 ZBTB42B2RXF5 422 aa4.86□□□□□ -1.63
RNU6-1140P-201ENST00000410517 ITGB5P18084 799 aa4.86□□□□□ -1.63
RNU6-1140P-201ENST00000410517 EPHA4P54764 986 aa4.86□□□□□ -1.63
RNU6-1140P-201ENST00000410517 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.86□□□□□ -1.63
RNU6-1140P-201ENST00000410517 TP53INP2Q8IXH6 220 aa4.86□□□□□ -1.63
RNU6-1140P-201ENST00000410517 DCAF11Q8TEB1 546 aa4.86□□□□□ -1.63
RNU6-1140P-201ENST00000410517 CEP41Q9BYV8 373 aa4.86□□□□□ -1.63
RNU6-1140P-201ENST00000410517 A6NJR5 290 aa4.85□□□□□ -1.63
RNU6-1140P-201ENST00000410517 SETDB1Q15047 1291 aa4.85□□□□□ -1.63
RNU6-1140P-201ENST00000410517 HFE2Q6ZVN8 426 aa4.85□□□□□ -1.63
RNU6-1140P-201ENST00000410517 HOMEZQ8IX15 550 aa4.85□□□□□ -1.63
RNU6-1140P-201ENST00000410517 IL22RA1Q8N6P7 574 aa4.85□□□□□ -1.63
RNU6-1140P-201ENST00000410517 CHMP3Q9Y3E7 222 aa4.85□□□□□ -1.63
RNU6-1140P-201ENST00000410517 NISCHQ9Y2I1 1504 aa4.85□□□□□ -1.63
RNU6-1140P-201ENST00000410517 MAP3K6O95382 1288 aa4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 PSMA6P60900 246 aaKnown RBP4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 MCM6Q14566 821 aa4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 PKN1Q16512 942 aa4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 UVSSAQ2YD98 709 aa4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 GDF6Q6KF10 455 aaPredicted RBP4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 DHX32Q7L7V1 743 aaKnown RBP4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 KRT25Q7Z3Z0 450 aa4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 TRPM4Q8TD43 1214 aa4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 SRA1Q9HD15 236 aaKnown RBP4.84□□□□□ -1.63
RNU6-1140P-201ENST00000410517 EIF2AK2P19525 551 aaKnown RBP4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 GTF2IP78347 998 aa4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 CLEC10AQ8IUN9 316 aa4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 MAP4K3Q8IVH8 894 aa4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 FBXL18Q96ME1 805 aa4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 KCNF1Q9H3M0 494 aa4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PIM2Q9P1W9 311 aa4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 ZFATQ9P243 1243 aa4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 CCDC39Q9UFE4 941 aa4.83□□□□□ -1.64
RNU6-1140P-201ENST00000410517 NCANO14594 1321 aa4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PRRG2O14669 202 aa4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 HIRAP54198 1017 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 GPLD1P80108 840 aa4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 ACAD11Q709F0 780 aa4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PROSER2Q86WR7 435 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 FAM46AQ96IP4 442 aaKnown RBP4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 MYRFLQ96LU7 910 aa4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 FAM83CQ9BQN1 747 aa4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 SNRKQ9NRH2 765 aa4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 NOD1Q9Y239 953 aa4.82□□□□□ -1.64
RNU6-1140P-201ENST00000410517 WISP1O95388 367 aa4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 TARSP26639 723 aaKnown RBP4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 COL19A1Q14993 1142 aa4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 LILRA6Q6PI73 481 aa4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 BEND4Q6ZU67 534 aa4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 FAM20CQ8IXL6 584 aa4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PLD4Q96BZ4 506 aa4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 TSPAN10Q9H1Z9 355 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 LEMD3Q9Y2U8 911 aa4.81□□□□□ -1.64
RNU6-1140P-201ENST00000410517 FARP2O94887 1054 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 BMP3P12645 472 aa4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 ARID4AP29374 1257 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 VAC14Q08AM6 782 aa4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 HIF1AQ16665 826 aa4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 EML3Q32P44 896 aa4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 ALDH16A1Q8IZ83 802 aa4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 CCDC97Q96F63 343 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 MFSD14AQ96MC6 490 aa4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 ATG3Q9NT62 314 aa4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 TBC1D2BQ9UPU7 963 aa4.8□□□□□ -1.64
RNU6-1140P-201ENST00000410517 B8ZZF3 427 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 RARAP10276 462 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 EPB42P16452 691 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 MSMPQ1L6U9 139 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 WASHC4Q2M389 1173 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 NFXL1Q6ZNB6 911 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 VSIG10LQ86VR7 867 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 KSR1Q8IVT5 923 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 GALNT11Q8NCW6 608 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 GIMAP7Q8NHV1 300 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 IFT43Q96FT9 208 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 SERPINA10Q9UK55 444 aa4.79□□□□□ -1.64
RNU6-1140P-201ENST00000410517 J3QW42 95 aa4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 SUPT5HO00267 1087 aaKnown RBP4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 SART1O43290 800 aaKnown RBP4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 SASH3O75995 380 aa4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PAPLNO95428 1278 aa4.78□□□□□ -1.64
RNU6-1140P-201ENST00000410517 PRNPP04156 253 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms